Phaeodactylum tricornutum: PHATRDRAFT_47158
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Entry
PHATRDRAFT_47158 CDS
T01075
Name
(RefSeq) machado-joseph disease-like protein
KO
K11863
ataxin-3 [EC:3.4.22.-]
Organism
pti
Phaeodactylum tricornutum
Pathway
pti04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
pti00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
PHATRDRAFT_47158
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
pti01002
]
PHATRDRAFT_47158
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pti04121
]
PHATRDRAFT_47158
Peptidases and inhibitors [BR:
pti01002
]
Cysteine peptidases
Family C86
PHATRDRAFT_47158
Ubiquitin system [BR:
pti04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
MJD
PHATRDRAFT_47158
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Josephin
UBX
UIM_2
UIM
OTU1_UBXL
Motif
Other DBs
NCBI-GeneID:
7202055
NCBI-ProteinID:
XP_002181243
JGI:
47158
UniProt:
B7G2P4
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All DBs
Position
12:643796..>644939
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AA seq
375 aa
AA seq
DB search
MTTTKLDPENVWIYHERQEASLCGQHALNNLAQKPVFTAYQLAQIAHQLDELELSYMAQN
DEGGTRSTDYQRRLAEGSGNVDAQGNFSIQVLKAALQQEYNLPLPHLSQDVLQQQKLTAR
SDITDFQGFLCHKSDHWFAIRKVGGRFWNLNSTLKVPVVVSHFQLATEMETWRGQGYTIF
CVPSGLPTEGQKQKIAGGLKAEVHRMSDLVRGKPTEKNPWDSLSGRGMRLDGGGTGNALS
RKNEGGNPISNGMVVDELTEEEQLQMALQASLEPISDANVPNAVASATLPVPSEPDTSAV
GAVRIQFRLPDGSRRVRRFLDTDPMGVVFSYVREQSDGRAIDLRYGFPPRDLVLVHDQTI
AEANLANESIQGRFV
NT seq
1128 nt
NT seq
+upstream
nt +downstream
nt
atgacaacgacaaagctcgatcccgaaaacgtgtggatctaccacgagcgtcaggaagct
tcgttatgcgggcagcacgcgttgaacaaccttgcccagaaacccgtgtttactgcttat
cagctggcacaaattgcccatcaactcgacgagctggaactctcgtacatggcgcaaaac
gacgagggcgggacccgctccaccgattaccaacgccgtttggctgaaggcagcggaaat
gtggacgcgcaagggaattttagcattcaggttttgaaagcagcactgcagcaagagtac
aatctgccgttaccgcacttatcgcaggatgtgttacagcaacaaaagttaacggcgcgt
tcggatatcacagattttcaaggatttctctgccacaagtcggatcactggtttgcgatt
cggaaagttggcggtcgcttttggaatctcaattcgacgttaaaagttcccgtcgtggtt
agtcacttccagctcgcgaccgaaatggaaacatggcggggacagggctacaccatattt
tgcgtgccctccggcttgcccacggaaggacagaagcaaaaaattgcaggagggttaaag
gccgaggttcatcgcatgtcggacctcgtacgaggaaagccaacggaaaagaatccctgg
gatagcttgtctggacgcggaatgcgcttggatggtggtggcaccggcaatgctttaagt
cgcaagaacgaaggaggaaacccgatcagcaatggaatggtagtggacgaattgaccgaa
gaggagcagctgcaaatggccttgcaagccagcttggaacctattagtgatgcgaatgtc
cctaacgccgtggcatcggcaacactacccgtcccgtccgagccagatacttcggccgtc
ggtgccgtacggattcaatttcgcttgccggacggttcgcggcgtgtccgaagatttctg
gatacagatccaatgggagttgttttttcttacgtcagggaacagtcagatggacgtgcc
atcgatcttcgttacggttttcctcccagagatttggtcctggtacatgatcaaacaatt
gccgaagcgaatcttgccaacgaaagcattcaaggtcgatttgtgtag
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