Phaeodactylum tricornutum: PHATRDRAFT_9983
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Entry
PHATRDRAFT_9983 CDS
T01075
Name
(RefSeq) hypothetical protein
KO
K12845
U4/U6 small nuclear ribonucleoprotein SNU13
Organism
pti
Phaeodactylum tricornutum
Pathway
pti03008
Ribosome biogenesis in eukaryotes
pti03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pti00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
PHATRDRAFT_9983
09122 Translation
03008 Ribosome biogenesis in eukaryotes
PHATRDRAFT_9983
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pti03041
]
PHATRDRAFT_9983
03009 Ribosome biogenesis [BR:
pti03009
]
PHATRDRAFT_9983
Spliceosome [BR:
pti03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6 snRNP specific factors
PHATRDRAFT_9983
Ribosome biogenesis [BR:
pti03009
]
Eukaryotic type
Sno RNPs
Box C/D snoRNPs
PHATRDRAFT_9983
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ribosomal_L7Ae
PELOTA_1
Stu2_CTS
Pico_P2B
RNase_P_pop3
Motif
Other DBs
NCBI-GeneID:
7197209
NCBI-ProteinID:
XP_002177673
JGI:
9983
UniProt:
B7FSJ0
LinkDB
All DBs
Position
2:724554..725052
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AA seq
123 aa
AA seq
DB search
MSEKAFPLADAELTIALLDLIQQATNYKQTKKGANEATKTLNRGISELIIMSADAEPIEI
LLHLPLLCEDKNVPYVFVPSKIALGRACGVSRPVIACSITTNETSQLKTTIEGMKIKIEQ
LLI
NT seq
372 nt
NT seq
+upstream
nt +downstream
nt
atgtccgaaaaagcctttccccttgcggatgcggaattgaccattgccttgttggatctg
atccagcaggctaccaactacaagcagaccaagaagggtgccaacgaagcaacgaaaacg
ttgaatcgcggtatcagtgaactgatcatcatgtcggcggacgccgaacctattgagatt
ctcttgcatttgccgttgttgtgtgaagataagaacgtgccgtacgtcttcgtaccgagt
aaaattgcgttgggtcgtgcgtgtggtgtttcccgtccggtcattgcgtgttccataacg
acgaacgagacttcgcagctcaagacgaccattgaaggtatgaagatcaagattgagcag
ctgctcatttaa
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