Phaeodactylum tricornutum: PHATR_43904
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Entry
PHATR_43904 CDS
T01075
Name
(RefSeq) phytoene desaturase. zeta-carotene desaturase. bacterial-like protein
KO
K15745
phytoene desaturase (3,4-didehydrolycopene-forming) [EC:
1.3.99.30
]
Organism
pti
Phaeodactylum tricornutum
Pathway
pti01100
Metabolic pathways
pti01110
Biosynthesis of secondary metabolites
Module
pti_M00097
Lycopene biosynthesis, geranylgeranyl-PP => lycopene
Brite
Enzymes [BR:
pti01000
]
1. Oxidoreductases
1.3 Acting on the CH-CH group of donors
1.3.99 With unknown physiological acceptors
1.3.99.30 phytoene desaturase (3,4-didehydrolycopene-forming)
PHATR_43904
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Ortholog
Paralog
GFIT
Motif
Pfam:
Amino_oxidase
NAD_binding_8
DAO
Pyr_redox_2
FAD_oxidored
Thi4
FAD_binding_2
HI0933_like
Lycopene_cycl
PRMT5
GIDA
Motif
Other DBs
NCBI-GeneID:
7204310
NCBI-ProteinID:
XP_002186335
JGI:
43904
UniProt:
B5Y4Q5
LinkDB
All DBs
Position
3:complement(387855..>390089)
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AA seq
696 aa
AA seq
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MQSRVCHFRFRWDPSGDPSKIRNLVMRSRQSSRRPGHAHEKGSARVTQTAGLFAMRDALG
ILALAWCSRSRNSCSSSIAVGSFASPLSPPPGRNRATQRQLVVAHQTNSQQSVVGGSTRK
SRRVVVVGGGVGGLATAARVAVASPSTEVIILEKNDFVGGRCGSFNVDVPGKGTFRHERG
PSLLLLPHVYREIFEYCGSTPEENGLEMKQCTPAYQVVFSDGDCIQLGFPRASDKVERSE
EELKSRRKMDTFERNGAAKWDAYMKTCEAFLDCGLPNFIEQRLDMKSFPAFIREALRDFG
KGWPLKPHSDVLDSFFESDKMRAMASFQDLYVGLEPYRNNQLLGGGVLTTTAPAVFGLLA
AIELHPTNAKCGVYAPIGGFQAVSLALEKLARSCGVKTLTGRAVSEVTDEGVFYVETQAN
ATETKFLSADLVVVNADFPYATQSLISKSETRYSPRFDWDDRFLYSSGVIAFHWSVGRSL
DDLYTHNVFMVSGSRKKVEESWSVLRDASTSSFDFEDAEFNFYVHRPMATDSTAAPQGLD
AILILVPCPTLLRDPANMHLSRDESIAAYKNQISEGSINILRRKVIQRLTAIPSLATFGS
DDILDEHVDTPGTYADRFHCGAGSPFALSHGFKQLSLARPGPTSQKHHKLIFTGASVRPG
NGVPLVLIGAKGAEEAILSKLRDTSKDVQWESKNAW
NT seq
2091 nt
NT seq
+upstream
nt +downstream
nt
atgcaatcacgtgtttgtcactttcgcttccgatgggatccttcgggagatccatccaaa
attcgtaatttggtgatgcggagccgccaatccagtcggcgtccagggcacgcgcacgaa
aagggatcggcgagagtgacccaaacggccggattgtttgccatgcgcgatgcactgggt
atcttggcgctagcatggtgcagccggagtaggaattcgtgctcgtcgtctattgccgtc
ggctcctttgcgagtcccctttctccgcctcccgggaggaaccgagccacgcagcggcaa
ctagtggtggcccaccagaccaattcccaacaatctgtcgttgggggtagcacaagaaaa
tcacgccgtgttgtcgtcgtgggtgggggagtcggtgggttggctacggcggctcgtgtt
gcggtagcttcgccgtctacggaagtcatcattttggaaaagaacgactttgttggaggc
cgttgtgggtcattcaacgtcgatgtgcccggaaaaggaacatttcgtcacgaacgagga
cccagcctgctacttttgcctcatgtctaccgggaaattttcgaatattgtgggagtaca
ccggaagagaatgggttggaaatgaaacaatgcactccggcataccaggtagtcttttcg
gacggagactgtattcaactgggttttccccgcgcatcagacaaggttgaaagatccgaa
gaagaattgaagtcgcggaggaaaatggacacttttgaaaggaatggagccgcaaaatgg
gatgcctacatgaagacctgtgaagcgttccttgattgtgggctaccaaactttatcgag
cagcgtcttgacatgaaaagtttccctgcttttattcgagaagcactcagggactttggt
aaagggtggccgttaaaaccccattcggacgttttggattctttcttcgagtccgacaag
atgcgtgccatggcttccttccaagatttgtacgtcgggcttgagccctatcgcaacaat
caactacttgggggaggcgttctgactactactgcacctgccgtatttggtcttttggct
gcgattgagctgcatcccacgaatgcaaagtgtggtgtgtatgctccaatcggaggcttt
caggccgtttctttggcattggaaaagctggcaagatcgtgcggagtaaagactcttact
ggtagagctgtatctgaggtaaccgacgaaggggtcttctatgtagaaacacaagcaaat
gctacagagacaaagtttctttctgctgacctggtggtggtcaatgcggatttcccatac
gcaacgcaaagtcttatttcaaaatcggaaaccaggtacagcccccggtttgactgggac
gaccgatttctctacagcagcggcgttattgcatttcattggtcggtcggtagatctctg
gatgatctttatacgcacaacgtcttcatggtgagtggtagtcgcaagaaggttgaagaa
agctggagtgttctgcgagatgctagtacatcctcctttgattttgaggatgccgagttt
aacttttacgttcatcgaccaatggcgacagattccacggctgctccccaggggctcgat
gcgattctgattctcgttccatgtccaacacttctacgtgaccctgccaatatgcatttg
agtcgggatgagtcgattgcagcgtataaaaatcagattagtgaaggaagtatcaacatt
ttacggcgcaaagtcatccaacgcctgacggcaattccttccttggccacctttggctcg
gacgatattctggacgagcacgtggacacacccggcacgtacgccgatcggtttcattgt
ggggcagggtcccctttcgcgctaagccacggattcaaacaactcagcctcgctagacct
ggtcctacgtcccagaaacaccataagcttatcttcacaggagcaagtgttcgaccggga
aacggggttcctttggtgctgattggtgccaagggggctgaagaggccattttgtccaag
ctgagggatacatcaaaggatgttcagtgggaaagcaaaaatgcctggtag
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