Paenibacillus tianjinensis: JRJ22_17840
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Entry
JRJ22_17840 CDS
T07842
Symbol
nth
Name
(GenBank) endonuclease III
KO
K10773
endonuclease III [EC:3.2.2.-
4.2.99.18
]
Organism
ptj
Paenibacillus tianjinensis
Pathway
ptj03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
ptj00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
JRJ22_17840 (nth)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ptj03400
]
JRJ22_17840 (nth)
Enzymes [BR:
ptj01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
JRJ22_17840 (nth)
DNA repair and recombination proteins [BR:
ptj03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
JRJ22_17840 (nth)
Prokaryotic type
JRJ22_17840 (nth)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HhH-GPD
HHH
EndIII_4Fe-2S
RecR_HhH
RLAN
Motif
Other DBs
NCBI-ProteinID:
QSF43140
LinkDB
All DBs
Position
complement(3920178..3920888)
Genome browser
AA seq
236 aa
AA seq
DB search
MKAAEVRHILDSIGDLFPDAHCELNHKNAFELTIAVLLSAQCTDATVNKVTEDLFQKYKT
PLDYVSVPLEELENDIRRIGLFRNKAKHIHNLCLILIEQYGGEVPQAHDLLVTLPGVGRK
TANVVVSNAFGVPAIAVDTHVERVAKRLALAGWKDSVLEVEKKLMKVIPREEWTLTHHRL
IFFGRYHCKAQNPACQICPLLDVCREGKKRMKTAVIRKDKITAGASKKLEMKKRMG
NT seq
711 nt
NT seq
+upstream
nt +downstream
nt
atgaaagctgcagaggtccgccacattctggatagtattggagacttgtttcctgatgcg
cattgtgaactgaaccacaagaacgccttcgagttaacgatcgcggtattgctgtcagcc
caatgtacggacgcaacagtaaacaaagtgaccgaggacctgtttcaaaagtacaaaact
ccactggattatgtttctgtccccttggaggagctggagaatgacatccggcgcatcggg
ttgtttcgcaacaaagccaagcatattcacaacctctgtttgattctgattgaacaatac
ggcggtgaagtcccgcaggcgcatgacttactggtaaccttaccgggtgtcgggcgcaaa
acggctaatgttgtagtttccaacgcatttggtgtcccggccatagccgtagacactcat
gtggaacgtgtagcaaaacggctcgcactagcaggctggaaggattctgtgctggaagtg
gagaagaagctcatgaaggtgataccccgtgaggaatggacgctcacgcatcaccggctg
atcttttttggacgatatcactgcaaggcacagaatcccgcatgccagatttgtccgttg
ctcgatgtgtgccgtgaaggcaagaagcgtatgaaaaccgccgtaatcaggaaagataag
attacagcgggagcaagcaaaaagttagagatgaagaagaggatgggatag
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