Purpureocillium takamizusanense: JDV02_005062
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Entry
JDV02_005062 CDS
T08929
Name
(RefSeq) DNA ligase (ATP)
KO
K10777
DNA ligase 4 [EC:
6.5.1.1
]
Organism
ptkz
Purpureocillium takamizusanense
Pathway
ptkz03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
ptkz00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
JDV02_005062
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ptkz03400
]
JDV02_005062
Enzymes [BR:
ptkz01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.1 DNA ligase (ATP)
JDV02_005062
DNA repair and recombination proteins [BR:
ptkz03400
]
Eukaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
DNA Ligase 4 complex
JDV02_005062
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_ligase_A_M
DNA_ligase_A_N
RNA_ligase
Motif
Other DBs
NCBI-GeneID:
72067012
NCBI-ProteinID:
XP_047842296
UniProt:
A0A9Q8V9Z1
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All DBs
Position
4:complement(join(1322376..1322591,1322693..1323590,1323639..1323721,1323772..1323865,1323919..1324532,1324587..1324922))
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AA seq
746 aa
AA seq
DB search
MPLPFSLVCDLLDECHRLCAARRSNAQAVADWFARHRGRIDAHDTNLPALLSTLLPDKRT
DRVYCIQTPSLEKIIGRGLGLGASRIAELARYRQPGLGLDLADCVERLLVTTPNPTYTDK
HRVSVEEIDALLHDLASRIKWSSPAIRSSQAGLTTRDRGDLEGIYRRLNAKEAKWLTRLV
LKDYRPLILDSKLVYQCCHPVLPAILQVQDDFTAAINVLQAAKSPMLPNSGRSAHFGNEM
IASVKPRLGVKVGRQNWFKARSIKHCSTLCYGRMSVEDKIDGEYCQIHVDATRDPPRIQI
FSKSGKDSTEDRQGLRGAISKSLRLGMPASNVRKNCILEGELVVYSDLEGKILPFHRIRN
HVSRRGRFMNTEDDTPPKPYENLMIVYFDMLLLDDCSLLDIRHSERFKLLERTIRRDTGR
AELVSRKVIDFGGRYAISDLRQAFARTIVERGEGLVLKPDDPYFNFHDSSKRFSGLCIKL
KKEYIGNFGDVGDLAVVGAGFNASKARSYMIPDLKWTHFYLACLENREEVKRWRAVPEFT
VVTVVELNEAQLKSVLAFGNPMPVEPPDNVDTKLKIPRGLETNTPMRFAFRNPLVFDLRC
FSFDKPGNVGFWTPRFPAVSKIHFDRDYTDTISLQELQEKAKEATRSPDMDDSQENLAWI
ARLEGADPHGRAVDANREYSFCRPGTGAPHNYQRVRRTAGSIDHATVVFSASGGRNIADS
FKDLSTKAPAGAFIGNATSTQETATT
NT seq
2241 nt
NT seq
+upstream
nt +downstream
nt
atgcctttgccattctcgctcgtctgcgacctgttggacgagtgccacaggctatgcgct
gcccgtcgatcaaatgcccaggctgttgcggactggtttgctcgccatcggggacgcatt
gatgcgcacgacacgaacttgccggccctgctatcgacgttgcttccagacaagaggacg
gaccgagtgtactgtatccagaccccgtcactcgagaagatcataggacgcggcctgggc
ctgggcgcatcgcgcattgcggaactggcaaggtatcgtcagccgggactcggattggac
ttggccgactgcgtcgaacgcctcctggttaccacccccaatcctacatatactgacaag
caccgcgtctccgtcgaggaaatcgatgcgttacttcacgatctagcttcaagaatcaaa
tggagttccccagccattcgcagctcgcaggcaggtctgacgacccgcgaccgcggcgac
ttggaaggcatctaccggcggctcaacgccaaggaagcaaaatggcttactcgacttgtc
ctcaaagactataggccgttgatcctcgactccaagctcgtttatcagtgctgtcatccg
gtccttccagcaatactgcaagttcaagacgactttacagcagccatcaacgtcttgcaa
gcagcgaaaagccccatgctcccaaattccggtcgttcggcacattttgggaatgaaatg
atcgcgtccgtaaaaccccggctgggcgtcaaggtaggtaggcaaaattggttcaaggct
cggagcatcaagcactgcagcacgctctgctacggccgcatgagcgtcgaggataaaatc
gacggtgaatactgtcagattcatgtcgatgccacccgcgaccctcctaggatacagata
ttctccaagagcggcaaggatagtacggaagacagacaaggtttgcgaggtgcgatatcg
aaatcactcagattgggcatgccggcatcaaacgttcggaaaaactgcattttggaaggt
gaattagttgtctatagcgacttggaaggcaagattctcccttttcataggatccgaaat
cacgtgtcgcgcagggggcgctttatgaatacagaagatgacacgccgcccaagccatac
gaaaatttaatgatagtatatttcgacatgctgcttctggacgattgctccttgctcgac
attcgccactctgagcgtttcaagctgctcgagcggacaatccgccgtgacacaggcagg
gcagagcttgtgtcgaggaaggtcattgatttcggtggtcgctacgccatttccgacctc
cgacaagccttcgcaaggacaattgtcgaacgcggcgaaggcctcgtgctgaagccagac
gatccctacttcaactttcacgacagcagcaagcgattttcgggactttgcataaagctg
aagaaggaatacattggcaactttggtgacgttggagacttagcagtggttggtgcgggc
ttcaatgcatccaaggcacgttcctacatgatcccagacctgaagtggacacacttttac
ttggcctgtttggaaaacagggaggaggtgaagaggtggcgtgcagtccccgagttcaca
gtcgtgacggttgtggagctgaacgaggcacaactcaagtctgttctggctttcggcaac
cccatgcccgtcgagccgcctgataatgttgacaccaagctaaagatcccacgcgggctt
gagaccaacacacccatgcgctttgctttccgaaaccccctcgtctttgacttgaggtgc
ttcagctttgacaagcccggaaacgtgggtttctggaccccgcggttccccgcggtttcc
aaaatccactttgaccgcgactatacagatacaatctcgctccaagaactccaggagaag
gccaaagaggcaaccagaagcccagatatggacgacagccaggaaaatctggcctggatt
gcgcggctcgaaggggctgacccccatggacgcgctgttgatgctaaccgtgaatacagc
ttctgccgacctggaacaggcgctccacacaactaccagagagttcgccgtaccgcaggc
tccattgatcacgccaccgtcgtcttctctgccagtggaggccgcaacatcgccgactcc
ttcaaagacctctctacgaaagcgccagctggagcctttattggaaatgccaccagcacg
caagaaacagcgacaacttga
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