Purpureocillium takamizusanense: JDV02_005227
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Entry
JDV02_005227 CDS
T08929
Symbol
CAF16
Name
(RefSeq) CCR4-NOT regulatory complex component
KO
K12608
CCR4-NOT complex subunit CAF16
Organism
ptkz
Purpureocillium takamizusanense
Pathway
ptkz03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ptkz00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
JDV02_005227 (CAF16)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ptkz03019
]
JDV02_005227 (CAF16)
Messenger RNA biogenesis [BR:
ptkz03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
JDV02_005227 (CAF16)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
ABC_tran
AAA_21
AAA_29
AAA
AAA_23
AAA_16
AAA_15
DUF3584
AAA_28
AAA_22
AAA_14
PduV-EutP
AAA_25
SRP54
RsgA_GTPase
ORC-CDC6-like
Arf
nSTAND3
AAA_13
NACHT
Motif
Other DBs
NCBI-GeneID:
72067176
NCBI-ProteinID:
XP_047842485
UniProt:
A0A9Q8QHJ6
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Position
4:complement(join(1911438..1911509,1911646..1912521))
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AA seq
315 aa
AA seq
DB search
MAAAAAASSSQKPPRVQVNDLSYTFPDYSTGVRHITLDLPPRSRTLLIGANGAGKTTLLR
LLAGKRLAPSNTISICGVDPFKESLEGVTYLGLEWVLNPIVRNDIGVVELLRSVGGDAYP
ERRDELVAMLDIDTNWRMHAVSDGERRRVQLAMGLLRPWTVLFLDEITVDLDVLSRASFL
DWLKRETESRECTIVYATHILDNLAGWPTHLVHMHLGTVKEWDRADTMLASIDGSVGHTG
NSRLGELVFGWLKQDLAERGPRSQANLGSEGKTYGFGGIKIGGYGDESKQSERQFNTARV
GGEDNNKTFLGKRAS
NT seq
948 nt
NT seq
+upstream
nt +downstream
nt
atggctgccgccgccgccgcctcgtcctcgcaaaagcccccccgggtgcaggtcaacgac
ctctcgtacaccttccccgactactcgacgggcgtccgccacatcacgctcgacctgccc
ccccgctcgcgcacgctgctcatcggcgcaaacggcgccggcaagacgacgctcctgcgg
cttctcgccggcaagcgcctcgcgcccagcaacaccatctccatctgcggcgtcgacccc
ttcaaggagagcctcgagggcgtcacctacctcggcctcgagtgggtgctcaaccccatc
gtccgcaacgacattggcgtcgtcgagctcctccgctccgtcggcggcgacgcctacccc
gagcgcagggacgagctcgtcgccatgctcgacattgacaccaactggcgcatgcacgcc
gtgtccgacggcgagcgccgccgcgtccagctcgccatgggcctgctccgcccctggacc
gtcctctttctcgacgagatcaccgtcgacctggatgtcctcagccgcgccagcttcctc
gactggctcaagcgcgagacagagtcccgcgagtgcaccatcgtctacgccacgcacatc
ctcgacaacctcgccggctggcccactcacctcgtccacatgcacctcggcaccgtcaag
gagtgggaccgcgccgacaccatgctcgcctccatcgacggctccgtcggccacaccggc
aacagccgcctcggcgagctcgtctttggctggctgaagcaggatctcgcggagcgcggg
cctcggagccaagccaacctcggctccgagggcaagacgtacggctttggcggcatcaag
attggcggctacggcgacgagtcaaagcagtcggagcgccagtttaacacagccagggtc
ggcggggaagacaacaacaaaacgtttctgggaaagagggcatcatag
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