Paramecium tetraurelia: GSPATT00010898001
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Entry
GSPATT00010898001 CDS
T01055
Name
(RefSeq) hypothetical protein
KO
K12845
U4/U6 small nuclear ribonucleoprotein SNU13
Organism
ptm
Paramecium tetraurelia
Pathway
ptm03008
Ribosome biogenesis in eukaryotes
ptm03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ptm00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
GSPATT00010898001
09122 Translation
03008 Ribosome biogenesis in eukaryotes
GSPATT00010898001
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ptm03041
]
GSPATT00010898001
03009 Ribosome biogenesis [BR:
ptm03009
]
GSPATT00010898001
Spliceosome [BR:
ptm03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6 snRNP specific factors
GSPATT00010898001
Ribosome biogenesis [BR:
ptm03009
]
Eukaryotic type
Sno RNPs
Box C/D snoRNPs
GSPATT00010898001
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ribosomal_L7Ae
PELOTA_1
RNase_P_pop3
Motif
Other DBs
NCBI-GeneID:
5027912
NCBI-ProteinID:
XP_001442127
Genoscope:
GSPATT00010898001
UniProt:
A0CVB3
LinkDB
All DBs
Position
undetermined
AA seq
166 aa
AA seq
DB search
MLSLPLEIEYISYKGISIIFKSRNQKKIKLIYIKYFQNEYPERAQPLANEEVEPQILELA
QQAAALKQLKKGANETTKTLNRGIAELVIIAADTTPLEIVLHLPLLCEDKNVPYVFVKSK
VDLGRMCGTSRNVVACSVIKDKNSRINQNITYLKDLCERLQINQEA
NT seq
501 nt
NT seq
+upstream
nt +downstream
nt
atgctctccttgcctttagaaatagaatatatatcatataaaggaatatcaattatattc
aaaagtagaaatcaaaaaaaaattaaattgatttacattaaatatttttaaaacgaatat
ccagaaagagcatagccattagctaatgaagaagttgaacctcaaattttagaacttgcc
tagtaggcagcagctctaaaataattaaaaaaaggagcgaatgaaaccacaaaaacttta
aatagaggtattgctgagttggtcattattgcagctgatacaacaccattagaaatagta
cttcatttgcctttgctttgtgaagataagaatgttccatatgtatttgttaagagcaag
gttgatttaggtagaatgtgtggtacaagcagaaatgtagttgcatgctcagtgattaaa
gataaaaactcaagaattaactaaaatatcacatacttaaaagatttgtgtgaaagatta
taaatcaactaagaagcatga
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