Paramecium tetraurelia: GSPATT00030724001
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Entry
GSPATT00030724001 CDS
T01055
Name
(RefSeq) hypothetical protein
KO
K03868
E3 ubiquitin-protein ligase RBX1 [EC:
2.3.2.32
]
Organism
ptm
Paramecium tetraurelia
Pathway
ptm03420
Nucleotide excision repair
ptm04120
Ubiquitin mediated proteolysis
ptm04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
ptm00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
GSPATT00030724001
04120 Ubiquitin mediated proteolysis
GSPATT00030724001
09124 Replication and repair
03420 Nucleotide excision repair
GSPATT00030724001
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ptm04121
]
GSPATT00030724001
03400 DNA repair and recombination proteins [BR:
ptm03400
]
GSPATT00030724001
Enzymes [BR:
ptm01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.32 cullin-RING-type E3 NEDD8 transferase
GSPATT00030724001
Ubiquitin system [BR:
ptm04121
]
Ubiquitin ligases (E3)
UBL E3 ligases
GSPATT00030724001
Multi subunit type E3
SCF complex
Ring finger protein
GSPATT00030724001
Cul2 complex
GSPATT00030724001
Cul3 complex
GSPATT00030724001
Cul4 complex
GSPATT00030724001
Cul7 complex
GSPATT00030724001
Cul8 complex
GSPATT00030724001
Cul9 complex
GSPATT00030724001
DNA repair and recombination proteins [BR:
ptm03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Cul4-DDB2 complex
GSPATT00030724001
TCR (transcription coupled repair) factors
Cul4-CSA complex
GSPATT00030724001
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-rbx1
zf-ANAPC11
zf-RING_2
PHD_NSD
zf-RING-like
zf-C3HC4
zf-RING_16
Motif
Other DBs
NCBI-GeneID:
5013268
NCBI-ProteinID:
XP_001427484
Genoscope:
GSPATT00030724001
UniProt:
A0BNG9
LinkDB
All DBs
Position
undetermined
AA seq
108 aa
AA seq
DB search
MQTESQYPQIDVKEFKAFAVWRWKAEQLNQNCCSCKKLMTEPCIDCEVNDQNDEQEKCIA
VQSGNCGHALHQHCIRKWIQTKSQGGTSGTCPMCDLIWEITNEVELQN
NT seq
327 nt
NT seq
+upstream
nt +downstream
nt
atgtaaaccgaatcacagtacccctaaatagatgtcaaggaattcaaggcatttgctgtt
tggagatggaaagctgaacaattaaatcaaaattgttgttcatgcaaaaaattgatgact
gaaccatgcattgattgcgaagtgaatgattagaatgatgagcaagaaaaatgcattgct
gtttagagtggaaattgcggtcatgctttacatcagcattgcataagaaaatggattcaa
accaaaagtcagggtggcacatcaggcacctgtccaatgtgtgacttgatttgggaaatc
acaaatgaagtcgaattatagaattga
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integrated database retrieval system