KEGG   Paramecium tetraurelia: GSPATT00030724001
Entry
GSPATT00030724001 CDS       T01055                                 
Name
(RefSeq) hypothetical protein
  KO
K03868  E3 ubiquitin-protein ligase RBX1 [EC:2.3.2.32]
Organism
ptm  Paramecium tetraurelia
Pathway
ptm03420  Nucleotide excision repair
ptm04120  Ubiquitin mediated proteolysis
ptm04141  Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:ptm00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04141 Protein processing in endoplasmic reticulum
    GSPATT00030724001
   04120 Ubiquitin mediated proteolysis
    GSPATT00030724001
  09124 Replication and repair
   03420 Nucleotide excision repair
    GSPATT00030724001
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:ptm04121]
    GSPATT00030724001
   03400 DNA repair and recombination proteins [BR:ptm03400]
    GSPATT00030724001
Enzymes [BR:ptm01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.32  cullin-RING-type E3 NEDD8 transferase
     GSPATT00030724001
Ubiquitin system [BR:ptm04121]
 Ubiquitin ligases (E3)
  UBL E3 ligases
   GSPATT00030724001
  Multi subunit type E3
   SCF complex
    Ring finger protein
     GSPATT00030724001
   Cul2 complex
     GSPATT00030724001
   Cul3 complex
     GSPATT00030724001
   Cul4 complex
     GSPATT00030724001
   Cul7 complex
     GSPATT00030724001
   Cul8 complex
     GSPATT00030724001
   Cul9 complex
     GSPATT00030724001
DNA repair and recombination proteins [BR:ptm03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     Cul4-DDB2 complex
      GSPATT00030724001
    TCR (transcription coupled repair) factors
     Cul4-CSA complex
      GSPATT00030724001
SSDB
Motif
Pfam: zf-rbx1 zf-ANAPC11 zf-RING_2 PHD_NSD zf-RING-like zf-C3HC4 zf-RING_16
Other DBs
NCBI-GeneID: 5013268
NCBI-ProteinID: XP_001427484
Genoscope: GSPATT00030724001
UniProt: A0BNG9
LinkDB
Position
undetermined
AA seq 108 aa
MQTESQYPQIDVKEFKAFAVWRWKAEQLNQNCCSCKKLMTEPCIDCEVNDQNDEQEKCIA
VQSGNCGHALHQHCIRKWIQTKSQGGTSGTCPMCDLIWEITNEVELQN
NT seq 327 nt   +upstreamnt  +downstreamnt
atgtaaaccgaatcacagtacccctaaatagatgtcaaggaattcaaggcatttgctgtt
tggagatggaaagctgaacaattaaatcaaaattgttgttcatgcaaaaaattgatgact
gaaccatgcattgattgcgaagtgaatgattagaatgatgagcaagaaaaatgcattgct
gtttagagtggaaattgcggtcatgctttacatcagcattgcataagaaaatggattcaa
accaaaagtcagggtggcacatcaggcacctgtccaatgtgtgacttgatttgggaaatc
acaaatgaagtcgaattatagaattga

DBGET integrated database retrieval system