KEGG   Paramecium tetraurelia: GSPATT00034014001
Entry
GSPATT00034014001 CDS       T01055                                 
Name
(RefSeq) hypothetical protein
  KO
K11086  small nuclear ribonucleoprotein B and B'
Organism
ptm  Paramecium tetraurelia
Pathway
ptm03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:ptm00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    GSPATT00034014001
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:ptm03019]
    GSPATT00034014001
   03041 Spliceosome [BR:ptm03041]
    GSPATT00034014001
   03032 DNA replication proteins [BR:ptm03032]
    GSPATT00034014001
Messenger RNA biogenesis [BR:ptm03019]
 Eukaryotic type
  mRNA processing factors
   3' end processing
    U7-dependent histone pre-mRNA processing factors
     GSPATT00034014001
Spliceosome [BR:ptm03041]
 Complex A
  U1 snRNP components
   Sm proteins
    GSPATT00034014001
  U2 snRNP components
    GSPATT00034014001
 Complex B
  U1 snRNP components
    GSPATT00034014001
  U4/U6.U5 tri-snRNP components
    GSPATT00034014001
 Complex C
  U2 snRNP components
    GSPATT00034014001
DNA replication proteins [BR:ptm03032]
 Eukaryotic type
  DNA Replication Termination Factors
   Telomerase complex (fungi)
    Sm core complex
     GSPATT00034014001
SSDB
Motif
Pfam: LSM
Other DBs
NCBI-GeneID: 5017720
NCBI-ProteinID: XP_001431936
Genoscope: GSPATT00034014001
UniProt: A0C171
LinkDB
Position
undetermined
AA seq 126 aa
MSQKSKFFQWIDYRVRITLGDGRMLVGTFLAFDKHLNVILSECEEYRIRKQGIHEIETKR
TLGMIIVRGDNIISLSAEAPPHQPPKKQELQPGPGKAQPITRQGPKGMGLPGQQTMMPAG
MSMPPM
NT seq 381 nt   +upstreamnt  +downstreamnt
atgtcttagaaaagcaagtttttttagtggattgattacagagttcgtattactttgggt
gacggacgtatgttggttggaacctttttagcatttgacaaacatttgaatgtgattctg
agtgaatgcgaagaatacagaataagaaagcaaggaatccacgaaatcgaaaccaaaaga
actttgggaatgatcattgtgagaggcgataatataatatcattgtcagctgaagcccct
cctcatcaacctccaaagaaacaagaattacaaccaggaccaggaaaagcccaaccaata
acaagacagggaccaaagggaatgggtttgcctgggtaataaactatgatgcctgcagga
atgagtatgcctccgatgtga

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