Paramecium tetraurelia: GSPATT00037295001
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Entry
GSPATT00037295001 CDS
T01055
Name
(RefSeq) hypothetical protein
KO
K11086
small nuclear ribonucleoprotein B and B'
Organism
ptm
Paramecium tetraurelia
Pathway
ptm03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ptm00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
GSPATT00037295001
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ptm03019
]
GSPATT00037295001
03041 Spliceosome [BR:
ptm03041
]
GSPATT00037295001
03032 DNA replication proteins [BR:
ptm03032
]
GSPATT00037295001
Messenger RNA biogenesis [BR:
ptm03019
]
Eukaryotic type
mRNA processing factors
3' end processing
U7-dependent histone pre-mRNA processing factors
GSPATT00037295001
Spliceosome [BR:
ptm03041
]
Complex A
U1 snRNP components
Sm proteins
GSPATT00037295001
U2 snRNP components
GSPATT00037295001
Complex B
U1 snRNP components
GSPATT00037295001
U4/U6.U5 tri-snRNP components
GSPATT00037295001
Complex C
U2 snRNP components
GSPATT00037295001
DNA replication proteins [BR:
ptm03032
]
Eukaryotic type
DNA Replication Termination Factors
Telomerase complex (fungi)
Sm core complex
GSPATT00037295001
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LSM
Motif
Other DBs
NCBI-GeneID:
5021692
NCBI-ProteinID:
XP_001435907
Genoscope:
GSPATT00037295001
UniProt:
A0CCJ3
LinkDB
All DBs
Position
undetermined
AA seq
138 aa
AA seq
DB search
MSQKSKFFQWIDYRVRITLGDGRMLVGTFLAFDKHLNVILSECEEYRIRKQGIHEIETKR
TLGMIIVRGDNIISLSAEAPPHQPPKKQELQPGPGKAQPITRQGVTGAPNIGLISQPKGM
GLPGQQTMMPAGMSMPPM
NT seq
417 nt
NT seq
+upstream
nt +downstream
nt
atgtcttagaaaagtaaatttttttagtggattgattacagagttcgtattactttaggt
gatggacgtatgttggttggaacctttttagcttttgacaagcatttgaatgtgattctg
agtgaatgcgaagaatacagaataagaaagcaaggaatccacgaaatcgaaaccaaaaga
actttgggaatgatcatcgtaagaggcgataatataatatcattatcagctgaagcccct
cctcatcaacctccaaagaaacaagaattataaccaggaccaggaaaagcccaaccaata
acaagacagggagtgacaggagcaccaaatattggtttgatttcataacctaagggaatg
ggtttacctgggtaataaactatgatgcctgcaggaatgagtatgcctccgatgtga
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