KEGG   Paramecium tetraurelia: GSPATT00037295001
Entry
GSPATT00037295001 CDS       T01055                                 
Name
(RefSeq) hypothetical protein
  KO
K11086  small nuclear ribonucleoprotein B and B'
Organism
ptm  Paramecium tetraurelia
Pathway
ptm03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:ptm00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    GSPATT00037295001
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:ptm03019]
    GSPATT00037295001
   03041 Spliceosome [BR:ptm03041]
    GSPATT00037295001
   03032 DNA replication proteins [BR:ptm03032]
    GSPATT00037295001
Messenger RNA biogenesis [BR:ptm03019]
 Eukaryotic type
  mRNA processing factors
   3' end processing
    U7-dependent histone pre-mRNA processing factors
     GSPATT00037295001
Spliceosome [BR:ptm03041]
 Complex A
  U1 snRNP components
   Sm proteins
    GSPATT00037295001
  U2 snRNP components
    GSPATT00037295001
 Complex B
  U1 snRNP components
    GSPATT00037295001
  U4/U6.U5 tri-snRNP components
    GSPATT00037295001
 Complex C
  U2 snRNP components
    GSPATT00037295001
DNA replication proteins [BR:ptm03032]
 Eukaryotic type
  DNA Replication Termination Factors
   Telomerase complex (fungi)
    Sm core complex
     GSPATT00037295001
SSDB
Motif
Pfam: LSM
Other DBs
NCBI-GeneID: 5021692
NCBI-ProteinID: XP_001435907
Genoscope: GSPATT00037295001
UniProt: A0CCJ3
LinkDB
Position
undetermined
AA seq 138 aa
MSQKSKFFQWIDYRVRITLGDGRMLVGTFLAFDKHLNVILSECEEYRIRKQGIHEIETKR
TLGMIIVRGDNIISLSAEAPPHQPPKKQELQPGPGKAQPITRQGVTGAPNIGLISQPKGM
GLPGQQTMMPAGMSMPPM
NT seq 417 nt   +upstreamnt  +downstreamnt
atgtcttagaaaagtaaatttttttagtggattgattacagagttcgtattactttaggt
gatggacgtatgttggttggaacctttttagcttttgacaagcatttgaatgtgattctg
agtgaatgcgaagaatacagaataagaaagcaaggaatccacgaaatcgaaaccaaaaga
actttgggaatgatcatcgtaagaggcgataatataatatcattatcagctgaagcccct
cctcatcaacctccaaagaaacaagaattataaccaggaccaggaaaagcccaaccaata
acaagacagggagtgacaggagcaccaaatattggtttgatttcataacctaagggaatg
ggtttacctgggtaataaactatgatgcctgcaggaatgagtatgcctccgatgtga

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