Planktomarina temperata: RCA23_c15720
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Entry
RCA23_c15720 CDS
T03229
Symbol
ispF
Name
(GenBank) 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase IspF
KO
K12506
2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase / 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase [EC:
2.7.7.60
4.6.1.12
]
Organism
ptp
Planktomarina temperata
Pathway
ptp00900
Terpenoid backbone biosynthesis
ptp01100
Metabolic pathways
ptp01110
Biosynthesis of secondary metabolites
Module
ptp_M00096
C5 isoprenoid biosynthesis, non-mevalonate pathway
Brite
KEGG Orthology (KO) [BR:
ptp00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00900 Terpenoid backbone biosynthesis
RCA23_c15720 (ispF)
Enzymes [BR:
ptp01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.60 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase
RCA23_c15720 (ispF)
4. Lyases
4.6 Phosphorus-oxygen lyases
4.6.1 Phosphorus-oxygen lyases (only sub-subclass identified to date)
4.6.1.12 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase
RCA23_c15720 (ispF)
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Motif
Pfam:
IspD
YgbB
NTP_transf_3
CTP_transf_3
sCache_3_2
Motif
Other DBs
NCBI-ProteinID:
AII87109
UniProt:
A0AAN0RJ82
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All DBs
Position
complement(1689581..1690723)
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AA seq
380 aa
AA seq
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MTDAPKTIAIVLAAGRGTRAGGTVPKQWRMLLGRPLIAWSIDAFMSHADIDAVVVVHHPD
DQDRIAQLPAAVRALHGGANRDDSVRCALEALKDQAPDYVLIHDAARPCVTHSVISRCVE
TMRAQGAAAPAVAVQDTLWRGGDTVTAQVDRSDLWRAQTPQCFSYPVIYAAHAAATDPAT
DDVQVVRAAGHPVAIVPGEADNLKVTVPGDFARAERILRGRMQLRLGNGFDVHKFGPGTE
ITLCGVTLPHKAGLLGHSDADVGMHAVTDAIYGALARGDIGQHFPPSDPQWKGAPSDIFL
KHAVQLAKDLGFHIENVDCTLICEFPKIGPHAQAMQARMAQIMGLECDQVSIKATTSETL
GFTGREEGIAAIATAALVSQ
NT seq
1143 nt
NT seq
+upstream
nt +downstream
nt
atgacagatgcacccaaaactatcgcgatcgtactggcggccggccgtggcacgcgcgct
ggcggcacagtgccgaaacaatggcgaatgctcctgggcaggccactgatagcttggtct
atcgatgcgtttatgtctcacgcggacatcgatgcggtcgtggtggtgcatcacccggac
gatcaagatcggatcgcgcagctgccggcagcggtgcgcgccctgcacggcggcgcaaac
cgcgacgattctgtgcgttgcgcccttgaggctctcaaagatcaggccccagattatgtt
ttgatccacgatgccgcgcgcccatgtgtgacccactctgtgatctctcgttgcgttgag
accatgcgcgcccagggcgcagcggcgcccgcagtcgcggtgcaagataccttgtggcgc
ggcggtgatacagtgacggcgcaagtagatcgcagtgatctatggcgggcccaaacgccc
cagtgcttttcttatccggtgatttatgcggcacatgcggccgcgacagacccggcgacg
gatgatgtgcaagttgttcgcgccgcgggacacccggttgccattgtccccggagaggcc
gataatctgaaagtaacagtgcccggtgactttgcccgggcggaacgaattttgcgaggc
cgcatgcaactacgtttgggcaacgggtttgacgttcataaatttggaccgggtacagag
atcacgctttgcggtgtcaccctgccccataaggccggtctgctgggccattcggatgca
gatgttgggatgcatgcggtgaccgatgccatttatggcgcattggcacgcggcgatatt
ggtcaacattttccaccctccgatccccaatggaagggcgccccttcggatattttccta
aaacacgcggtgcagctggccaaagaccttggctttcacattgaaaacgtggattgcacc
ttgatttgcgaatttccaaaaatcggcccccatgcacaagcgatgcaggcgcggatggca
cagatcatgggtctggagtgcgatcaagtctccatcaaagccaccacgtcagaaaccctt
gggtttacggggcgcgaagagggcattgcagccatcgccaccgcggccttggtgagccaa
tga
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