KEGG   Pan troglodytes (chimpanzee): 100610062
Entry
100610062         CDS       T01005                                 
Name
(RefSeq) DNA-directed RNA polymerase II subunit RPB11-a isoform X1
  KO
K03008  DNA-directed RNA polymerase II subunit RPB11
Organism
ptr  Pan troglodytes (chimpanzee)
Pathway
ptr03020  RNA polymerase
ptr03420  Nucleotide excision repair
ptr05016  Huntington disease
Brite
KEGG Orthology (KO) [BR:ptr00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    100610062
  09124 Replication and repair
   03420 Nucleotide excision repair
    100610062
 09160 Human Diseases
  09164 Neurodegenerative disease
   05016 Huntington disease
    100610062
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:ptr03021]
    100610062
   03400 DNA repair and recombination proteins [BR:ptr03400]
    100610062
Transcription machinery [BR:ptr03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Core subunits
     100610062
DNA repair and recombination proteins [BR:ptr03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      100610062
SSDB
Motif
Pfam: RNA_pol_L_2 RNA_pol_L
Other DBs
NCBI-GeneID: 100610062
NCBI-ProteinID: XP_024209283
Ensembl: ENSPTRG00000022966
LinkDB
Position
6:complement(112071143..112122929)
AA seq 159 aa
MNAPPAFELFLLFEGEKKITINKDTKVSNACLFTINKEDHTLGNIIKTQLLKDPQVLFAG
YKVPHPLEHKIIIRVQTTPDYSPQEAFTNAITDLISELSLLEERFRVRAGPGGADGVGWT
LARVPRPGTALACFFGGPRGEAAVMEEQGLPPQAPGHVD
NT seq 480 nt   +upstreamnt  +downstreamnt
atgaacgctcctccagccttcgagttgttcttgctcttcgagggcgagaagaagatcacc
attaacaaggacaccaaggtgtccaatgcctgtttattcaccatcaacaaagaagaccac
acactgggaaacatcattaagacacaactcctaaaggacccgcaagtgctatttgctggc
tacaaagtcccccaccccttggagcacaagatcatcatccgagtgcagaccacgccggac
tacagcccccaggaagcctttaccaacgccatcaccgacctcatcagtgagctgtccctg
ctggaggagcgcttccgggtgagggcggggcctggaggggcagacggggtgggctggaca
ctggcccgtgtgcccaggcctgggacagccctggcctgtttcttcggaggtcctagggga
gaggcagcggtgatggaagagcagggacttccaccacaggctccaggacatgtggactga

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