Pan troglodytes (chimpanzee): 100610307
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Entry
100610307 CDS
T01005
Name
(RefSeq) LOW QUALITY PROTEIN: nuclear pore complex protein Nup50-like
KO
K14295
nuclear pore complex protein Nup50
Organism
ptr
Pan troglodytes (chimpanzee)
Pathway
ptr03013
Nucleocytoplasmic transport
ptr05014
Amyotrophic lateral sclerosis
Brite
KEGG Orthology (KO) [BR:
ptr00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
100610307
09160 Human Diseases
09164 Neurodegenerative disease
05014 Amyotrophic lateral sclerosis
100610307
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ptr03019
]
100610307
Messenger RNA biogenesis [BR:
ptr03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
100610307
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ran_BP1
NUP50
EVH1_PP4R3
Motif
Other DBs
NCBI-GeneID:
100610307
NCBI-ProteinID:
XP_054542618
LinkDB
All DBs
Position
5:31107332..31108996
Genome browser
AA seq
439 aa
AA seq
DB search
MASEEVLKNRAIKKAKRRNVGFESDTGGALKXFKSLVVPSGGGRFPGFGSGAGGKPLEGL
SNGNNITSAPPFTSAKAAAEPKVAFGSLAANGPTALVDKVSNPKTNGDSQQPSSSGLASS
KACVGNAYHKQLAALNCSVWDWIVKHVNTNPLCDLTPIFKDYEKYLANIEQQHGNSGRNS
ESESNKVAAETQFPSLFGSTKLQQESTFLFHGNKTEDTPDKKVEVASEKKTDPSSLGATS
ASFNFGKKVDSSVLGSLSSVPLTGFSFSPGNSSLFGKDTTQSKPVSSPFPTKPLEGQAEG
DSGECKGGDEEENDEPPKVVVTEVKEDAFYSKKCKLFYKKDNEFKEKGIGTLHLKPTANQ
KTQLLVRADTNLGNILLNVLIPPNMPCTRTGKNNVLIVCVPNPPIDEKNATMPVTMLIRV
KTSEDADELHKILLEKKDA
NT seq
1319 nt
NT seq
+upstream
nt +downstream
nt
atggccagtgaggaagtcttgaagaatagagccataaagaaagcaaagcgcagaaatgtt
ggattcgaatctgacactggaggagcccttaaaggtttaaaagtttggtggtaccttctg
gaggaggacgctttcctggatttggtagtggcgctggagggaagcctttggaaggactgt
cgaatggaaacaacataaccagtgcccctcccttcaccagtgcaaaggcagcggcagagc
ccaaggtagcctttggttctcttgctgcaaatggccctaccgccttggttgataaagttt
caaatcccaaaactaatggggacagtcagcagccctcctcctctggccttgcttccagta
aagcttgtgtcggaaatgcctatcacaagcagttggccgccttgaactgctccgtgtggg
attggatagtgaagcacgtgaatacaaaccccctctgtgatctgacacctatctttaaag
actatgagaaatatttagcaaacattgaacagcaacacgggaacagtggcaggaattctg
aaagtgaatctaacaaagtggcggctgaaacacagtttccttccctttttggctcaacaa
aattacagcaagagtcaacgtttttgtttcatggcaacaaaactgaagatacacctgaca
agaaggtggaggtggcatctgaaaagaaaacggacccatcatcactaggagcgacaagtg
cctcatttaatttcggcaagaaagttgatagctctgttttgggctcattgagctctgtcc
ccctgactggattttctttctcccctggaaactccagtttatttggcaaagatactaccc
agagtaaaccagtctcttcaccatttcccactaaaccattggagggccaagcggaaggtg
acagtggtgaatgcaaaggtggagatgaagaagagaatgatgagccgcccaaagtagtag
ttaccgaagtaaaagaagatgctttttactccaaaaagtgtaaactgttttacaagaaag
acaatgagtttaaagagaaaggcataggtactctgcatttaaaacctacagcaaatcaga
agacacagcttttggtgcgggcagacaccaatttaggcaacatattgctgaatgttctga
ttccacccaatatgccatgtacgcgaacagggaagaataacgttcttatcgtctgtgttc
caaatccaccaattgacgagaagaatgccaccatgccagtcaccatgttgattcgggtaa
aaaccagcgaggatgcagacgagttgcacaaaattttactggagaaaaaggatgcctga
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