KEGG   Pan troglodytes (chimpanzee): 100611252
Entry
100611252         CDS       T01005                                 
Symbol
CLSTN1
Name
(RefSeq) calsyntenin-1 isoform X6
  KO
K22659  calsyntenin 1
Organism
ptr  Pan troglodytes (chimpanzee)
Brite
KEGG Orthology (KO) [BR:ptr00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04515 Cell adhesion molecules [BR:ptr04515]
    100611252 (CLSTN1)
Cell adhesion molecules [BR:ptr04515]
 Cadherins
  Cadherin related
   100611252 (CLSTN1)
SSDB
Motif
Pfam: CLSTN_C Cadherin Laminin_G_3 CDC45 Laminin_G_2 FAM176 EphA2_TM V_ATPase_I Glyco_hydro_16 Toxin_R_bind_N Cadherin_C_2 SID-1_RNA_chan PFF1_TM
Other DBs
NCBI-GeneID: 100611252
NCBI-ProteinID: XP_003307845
Ensembl: ENSPTRG00000000121
VGNC: 504
UniProt: K7D502 A0A6D2XAR9
LinkDB
Position
1:222168937..222264954
AA seq 971 aa
MLRRPAPALAPAARLLLAGLLCGGGVWAARVNKHKPWLEPTYHGIVTENDNTVLLDPPLI
ALDKDAPLRFAGEICGFKIHGQNVPFDAVVVDKSTGEGVIRSKEKLDCELQKDYSFTIQA
YDCGKGPDGTNVKKSHKATVHIQVNDVNEYAPVFKEKSYKATVIEGKQYDSILRVEAVDA
DCSPQFSQICSYEIITPDVPFTVDKDGYIKNTEKLNYGKEHQYKLTVTAYDCGKKRATED
VLVKISIKPTCTPGWQGWNNRIEYEPGTGALAIFPNIHLETCDEPVASVQATVELETSHI
GKGCDRDTYSEKSLHRLCGAAAGTAELLPSPSGSLNWTVGLPTDNGHDSDQVFEFNGTQA
VRIPDGVVSVSPKEPFTISVWMRHGPFGRKKETILCSSDKTDMNRHHYSLYVHGCRLIFL
FRQDPSEEKKYRPAEFHWKLNQVCDEEWHHYVLNVEFPSVTLYVDGTSHEPFSVTEDYPL
HPSKIETQLVVGACWQEFSGVENDNETEPVTVASAGGDLHMTQFFRGNLAGLTLRSGKLA
DKKVIDCLYTCKEGLDLQVLEDSGRGVQIQAHPSQLVLTLEGEDLGELDKAMQHISYLNS
RQFPTPGIRRLKITSTIKCFNEATCISVPPVDGYVMVLQPEEPKISLSGVHHFARAASEF
ESSEGVFLFPELRIISTITREVEPEGDGAEDPTVQESLVSEEIVHDLDTCEVTVEGEELN
HEQESLEVDMARLQQKGIEVSSSELGMTFTGVDTMASYEEVLHLLRYRNWHARSLLDRKF
KLICSELNGRYISNEFKVEVNVIHTANPMEHANHMAAQPQFVHPEHRSFVDLSGHNLANP
HPFAVVPSTATVVIVVCVSFLVFMIILGVFRIRAAHQRTMRDQDTGKENEMDWDDSALTI
TVNPMETYEDQHSSEEEEEEEEEEESEDGEDEDDITSAESESSEEEEGEQGDPQNATRQQ
QLEWDDSTLSY
NT seq 2916 nt   +upstreamnt  +downstreamnt
atgctgcgccgccccgcgcccgcgctggccccggccgcccggctgctgctggccgggctg
ctgtgcggcggcggggtctgggccgcgcgagttaacaagcacaagccctggctggagccc
acctaccacggcatagtcacagagaacgacaacacggtgctcctcgaccccccactgatc
gcgctggataaagatgcgcctctgcgatttgcaggtgagatttgtggatttaaaattcac
gggcagaatgtcccctttgatgcagtggtagtggataaatccactggtgagggagtcatt
cgctccaaagagaaactggactgtgagctgcagaaagactattcattcaccatccaggcc
tatgattgtgggaagggacctgatggcaccaacgtgaaaaagtctcataaagcaactgtt
catattcaggtgaacgacgtgaatgagtacgcgcccgtgttcaaggagaagtcctacaaa
gccacggtcatcgaggggaagcagtacgacagcattttgagggtggaggccgtggatgcc
gactgctctcctcagttcagccagatttgcagctacgaaatcatcactccagacgtgccc
tttactgtcgacaaagatggttatataaaaaacacagagaaattaaactacgggaaagaa
catcaatataagctgactgtcactgcctatgactgtgggaagaaaagagccacagaagat
gttttggtgaagatcagcattaagcccacctgcacccctgggtggcaaggatggaacaac
aggattgagtatgagccgggcaccggcgcgttggccatctttccaaatatccacctggag
acatgtgacgagccagtcgcctcagtacaggccacagtggagctagaaaccagccacata
gggaaaggctgcgaccgagacacctactcagagaagtccctccaccggctctgtggtgcg
gccgcgggcactgccgagctgctgccatccccgagtggatccctcaactggaccgtgggc
ctgcccaccgacaatggccacgacagcgaccaggtgtttgagttcaacggcacccaggca
gtgaggatcccggatggcgtcgtgtcggtcagccccaaagagccgttcaccatctcggtg
tggatgagacatgggccattcggcaggaagaaggagacaattctttgcagttctgataaa
acagatatgaatcggcaccactactccctctatgtccacgggtgccggctgatcttcctc
ttccgtcaggatccttctgaggagaagaaatacagacctgcagagttccactggaagttg
aatcaggtctgtgatgaggaatggcaccactacgtcctcaatgtagaattcccgagcgtg
actctctatgtggatggcacgtcccacgagcccttctctgtgactgaggattacccgctc
catccatccaagatagaaactcagctcgtggtgggggcttgctggcaagagttttcagga
gttgaaaatgacaatgaaactgagcctgtgactgtggcctctgcaggtggcgacctgcac
atgacccagtttttccgaggcaatctggctggcttaactctccgttccgggaaactcgcg
gataagaaggtgatcgactgtctgtatacctgcaaggaggggctggacctgcaggtcctc
gaagacagtggcagaggcgtgcagatccaagcacaccccagccagctggtattgaccttg
gagggagaagacctcggggaattggataaggccatgcagcacatctcgtacctgaactcc
cggcagttccccacgcccggaattcgcagactcaaaatcaccagcacaatcaagtgtttt
aacgaggccacctgcatttcggtccccccggtagatggctacgtgatggttttacagccc
gaggagcccaagatcagcctgagcggcgtccaccattttgcccgagcagcttctgaattt
gaaagctcagaaggggtgttccttttccctgagcttcgcatcatcagcaccatcacgaga
gaagtggagcctgaaggggacggggctgaggaccccacagttcaagaatcactggtgtct
gaggagatcgtgcacgacctggatacctgtgaggtcacggtggagggagaggagctgaac
cacgagcaggagagcctggaggtggacatggcccgcctgcagcagaagggcattgaagtg
agcagctctgagctgggcatgaccttcacaggcgtggacaccatggccagctacgaggag
gttttgcacctgctgcgctatcggaactggcacgccaggtccttgcttgaccgtaagttt
aagctcatctgctcagagctgaatggccgctacatcagcaatgaatttaaggtggaggtg
aatgtaatccacacggccaaccccatggaacacgccaaccacatggctgcccagccacag
ttcgtgcacccggaacaccgctcctttgttgacctgtcaggccacaacctggccaacccc
cacccgttcgcagtcgtccccagcactgcgaccgttgtgatcgtggtgtgcgtcagcttc
ctggtgttcatgattatcctgggggtatttcggatccgggccgcacatcagcggaccatg
cgggatcaggacactgggaaggagaacgagatggactgggacgactctgccctgaccatc
accgtcaaccccatggagacctatgaggaccagcacagcagtgaggaggaggaggaagag
gaagaggaagaggagagcgaggacggcgaagacgaggatgacatcaccagcgcagagtcg
gagagcagcgaggaggaggagggggagcagggcgacccccagaacgcaacccggcagcag
cagctggagtgggatgactccaccctcagctactga

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