Pan troglodytes (chimpanzee): 100611252
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Entry
100611252 CDS
T01005
Symbol
CLSTN1
Name
(RefSeq) calsyntenin-1 isoform X6
KO
K22659
calsyntenin 1
Organism
ptr
Pan troglodytes (chimpanzee)
Brite
KEGG Orthology (KO) [BR:
ptr00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
ptr04515
]
100611252 (CLSTN1)
Cell adhesion molecules [BR:
ptr04515
]
Cadherins
Cadherin related
100611252 (CLSTN1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CLSTN_C
Cadherin
Laminin_G_3
CDC45
Laminin_G_2
FAM176
EphA2_TM
V_ATPase_I
Glyco_hydro_16
Toxin_R_bind_N
Cadherin_C_2
SID-1_RNA_chan
PFF1_TM
Motif
Other DBs
NCBI-GeneID:
100611252
NCBI-ProteinID:
XP_003307845
Ensembl:
ENSPTRG00000000121
VGNC:
504
UniProt:
K7D502
A0A6D2XAR9
LinkDB
All DBs
Position
1:222168937..222264954
Genome browser
AA seq
971 aa
AA seq
DB search
MLRRPAPALAPAARLLLAGLLCGGGVWAARVNKHKPWLEPTYHGIVTENDNTVLLDPPLI
ALDKDAPLRFAGEICGFKIHGQNVPFDAVVVDKSTGEGVIRSKEKLDCELQKDYSFTIQA
YDCGKGPDGTNVKKSHKATVHIQVNDVNEYAPVFKEKSYKATVIEGKQYDSILRVEAVDA
DCSPQFSQICSYEIITPDVPFTVDKDGYIKNTEKLNYGKEHQYKLTVTAYDCGKKRATED
VLVKISIKPTCTPGWQGWNNRIEYEPGTGALAIFPNIHLETCDEPVASVQATVELETSHI
GKGCDRDTYSEKSLHRLCGAAAGTAELLPSPSGSLNWTVGLPTDNGHDSDQVFEFNGTQA
VRIPDGVVSVSPKEPFTISVWMRHGPFGRKKETILCSSDKTDMNRHHYSLYVHGCRLIFL
FRQDPSEEKKYRPAEFHWKLNQVCDEEWHHYVLNVEFPSVTLYVDGTSHEPFSVTEDYPL
HPSKIETQLVVGACWQEFSGVENDNETEPVTVASAGGDLHMTQFFRGNLAGLTLRSGKLA
DKKVIDCLYTCKEGLDLQVLEDSGRGVQIQAHPSQLVLTLEGEDLGELDKAMQHISYLNS
RQFPTPGIRRLKITSTIKCFNEATCISVPPVDGYVMVLQPEEPKISLSGVHHFARAASEF
ESSEGVFLFPELRIISTITREVEPEGDGAEDPTVQESLVSEEIVHDLDTCEVTVEGEELN
HEQESLEVDMARLQQKGIEVSSSELGMTFTGVDTMASYEEVLHLLRYRNWHARSLLDRKF
KLICSELNGRYISNEFKVEVNVIHTANPMEHANHMAAQPQFVHPEHRSFVDLSGHNLANP
HPFAVVPSTATVVIVVCVSFLVFMIILGVFRIRAAHQRTMRDQDTGKENEMDWDDSALTI
TVNPMETYEDQHSSEEEEEEEEEEESEDGEDEDDITSAESESSEEEEGEQGDPQNATRQQ
QLEWDDSTLSY
NT seq
2916 nt
NT seq
+upstream
nt +downstream
nt
atgctgcgccgccccgcgcccgcgctggccccggccgcccggctgctgctggccgggctg
ctgtgcggcggcggggtctgggccgcgcgagttaacaagcacaagccctggctggagccc
acctaccacggcatagtcacagagaacgacaacacggtgctcctcgaccccccactgatc
gcgctggataaagatgcgcctctgcgatttgcaggtgagatttgtggatttaaaattcac
gggcagaatgtcccctttgatgcagtggtagtggataaatccactggtgagggagtcatt
cgctccaaagagaaactggactgtgagctgcagaaagactattcattcaccatccaggcc
tatgattgtgggaagggacctgatggcaccaacgtgaaaaagtctcataaagcaactgtt
catattcaggtgaacgacgtgaatgagtacgcgcccgtgttcaaggagaagtcctacaaa
gccacggtcatcgaggggaagcagtacgacagcattttgagggtggaggccgtggatgcc
gactgctctcctcagttcagccagatttgcagctacgaaatcatcactccagacgtgccc
tttactgtcgacaaagatggttatataaaaaacacagagaaattaaactacgggaaagaa
catcaatataagctgactgtcactgcctatgactgtgggaagaaaagagccacagaagat
gttttggtgaagatcagcattaagcccacctgcacccctgggtggcaaggatggaacaac
aggattgagtatgagccgggcaccggcgcgttggccatctttccaaatatccacctggag
acatgtgacgagccagtcgcctcagtacaggccacagtggagctagaaaccagccacata
gggaaaggctgcgaccgagacacctactcagagaagtccctccaccggctctgtggtgcg
gccgcgggcactgccgagctgctgccatccccgagtggatccctcaactggaccgtgggc
ctgcccaccgacaatggccacgacagcgaccaggtgtttgagttcaacggcacccaggca
gtgaggatcccggatggcgtcgtgtcggtcagccccaaagagccgttcaccatctcggtg
tggatgagacatgggccattcggcaggaagaaggagacaattctttgcagttctgataaa
acagatatgaatcggcaccactactccctctatgtccacgggtgccggctgatcttcctc
ttccgtcaggatccttctgaggagaagaaatacagacctgcagagttccactggaagttg
aatcaggtctgtgatgaggaatggcaccactacgtcctcaatgtagaattcccgagcgtg
actctctatgtggatggcacgtcccacgagcccttctctgtgactgaggattacccgctc
catccatccaagatagaaactcagctcgtggtgggggcttgctggcaagagttttcagga
gttgaaaatgacaatgaaactgagcctgtgactgtggcctctgcaggtggcgacctgcac
atgacccagtttttccgaggcaatctggctggcttaactctccgttccgggaaactcgcg
gataagaaggtgatcgactgtctgtatacctgcaaggaggggctggacctgcaggtcctc
gaagacagtggcagaggcgtgcagatccaagcacaccccagccagctggtattgaccttg
gagggagaagacctcggggaattggataaggccatgcagcacatctcgtacctgaactcc
cggcagttccccacgcccggaattcgcagactcaaaatcaccagcacaatcaagtgtttt
aacgaggccacctgcatttcggtccccccggtagatggctacgtgatggttttacagccc
gaggagcccaagatcagcctgagcggcgtccaccattttgcccgagcagcttctgaattt
gaaagctcagaaggggtgttccttttccctgagcttcgcatcatcagcaccatcacgaga
gaagtggagcctgaaggggacggggctgaggaccccacagttcaagaatcactggtgtct
gaggagatcgtgcacgacctggatacctgtgaggtcacggtggagggagaggagctgaac
cacgagcaggagagcctggaggtggacatggcccgcctgcagcagaagggcattgaagtg
agcagctctgagctgggcatgaccttcacaggcgtggacaccatggccagctacgaggag
gttttgcacctgctgcgctatcggaactggcacgccaggtccttgcttgaccgtaagttt
aagctcatctgctcagagctgaatggccgctacatcagcaatgaatttaaggtggaggtg
aatgtaatccacacggccaaccccatggaacacgccaaccacatggctgcccagccacag
ttcgtgcacccggaacaccgctcctttgttgacctgtcaggccacaacctggccaacccc
cacccgttcgcagtcgtccccagcactgcgaccgttgtgatcgtggtgtgcgtcagcttc
ctggtgttcatgattatcctgggggtatttcggatccgggccgcacatcagcggaccatg
cgggatcaggacactgggaaggagaacgagatggactgggacgactctgccctgaccatc
accgtcaaccccatggagacctatgaggaccagcacagcagtgaggaggaggaggaagag
gaagaggaagaggagagcgaggacggcgaagacgaggatgacatcaccagcgcagagtcg
gagagcagcgaggaggaggagggggagcagggcgacccccagaacgcaacccggcagcag
cagctggagtgggatgactccaccctcagctactga
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