Pan troglodytes (chimpanzee): 100615508
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Entry
100615508 CDS
T01005
Symbol
SOX1
Name
(RefSeq) transcription factor SOX-1
KO
K09267
transcription factor SOX1/3/14/21 (SOX group B)
Organism
ptr
Pan troglodytes (chimpanzee)
Brite
KEGG Orthology (KO) [BR:
ptr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ptr03000
]
100615508 (SOX1)
Transcription factors [BR:
ptr03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
100615508 (SOX1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SOXp
HMG_box
HMG_box_2
HMG_WDHD1
Motif
Other DBs
NCBI-GeneID:
100615508
NCBI-ProteinID:
XP_016781055
Ensembl:
ENSPTRG00000040942
VGNC:
57491
UniProt:
A0A6D2W530
H2RHV2
LinkDB
All DBs
Position
14:117702323..117706289
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AA seq
389 aa
AA seq
DB search
MYSMMMETDLHSPGGAQAPTNLSGPAGAGGGGGGGGGGGGGAKANQDRVKRPMNAFMVWS
RGQRRKMAQENPKMHNSEISKRLGAEWKVMSEAEKRPFIDEAKRLRALHMKEHPDYKYRP
RRKTKTLLKKDKYSLAGGLLAAGAGGGGAAVAMGVGVGVGAAAVGQRLESPGGAAGGGYA
HVNGWANGAYPGSVAAAAAAAAMMQEAQLAYGQHPGAGGAHPHAHPAHPHPHHPHAHPHN
PQPMHRYDMGALQYSPISNSQGYMSASPSGYGGLPYGAAAAAAAAAGGAHQNSAVAAAAA
AAAASSGALGALGSLVKSEPSGSPPAPAHSRAPCPGDLREMISMYLPAGEGGDPAAAAAA
AAQSRLHSLPQHYQGAGAGVNGTVPLTHI
NT seq
1170 nt
NT seq
+upstream
nt +downstream
nt
atgtacagcatgatgatggagaccgacctgcactcgcccggcggcgcccaggcccccacg
aacctctcgggccccgccggggcgggcggcggcgggggcggaggcgggggcggcggcggg
ggcgccaaggccaaccaggaccgggtcaagcggcccatgaacgccttcatggtgtggtcc
cgcgggcagcggcgcaagatggcccaagagaaccccaagatgcacaactccgagatcagc
aagcgcctgggggccgaatggaaggtcatgtccgaggccgagaagcggccgttcatcgac
gaggccaagcggctgcgcgcgctgcacatgaaggagcacccggattacaagtaccggccg
cgccgcaagaccaagacgctgctcaagaaggacaagtactcgctggccggcgggctcctg
gcggccggcgcgggtggcggcggcgcggctgtggccatgggcgtgggcgtgggcgtgggc
gcggcggccgtgggccagcgcctggagagcccaggcggcgcggcgggcggcggctacgcg
cacgtcaacggctgggccaacggcgcctaccccggctcggtggcggcggcggcggcggcc
gcggccatgatgcaggaggcgcagctggcctacgggcagcacccgggcgcgggcggcgcg
cacccgcacgcgcaccccgcgcacccgcacccgcaccacccgcacgcgcacccgcacaac
ccgcagcccatgcaccgctacgacatgggcgcgctgcagtacagtcccatctccaactcg
cagggctacatgagcgcgtcgccctcgggctacggcggcctcccctacggcgccgcggcc
gctgccgccgccgctgcgggcggcgcgcaccagaactcggccgtggcggcggcggcggcg
gcggcggccgcgtcgtctggcgccctgggcgcgctgggctctctggtgaagtcggagccg
agcggcagcccgcccgccccagcgcactcgcgggcgccgtgccccggggacctgcgcgag
atgatcagcatgtacttgcccgccggcgaggggggcgacccggcggcggcagcagcggcc
gcggcgcagagccggctgcactcgctgccgcagcactaccagggcgcgggcgcgggcgtg
aacggcacggtgcccctgacgcacatctag
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