Entry |
|
Symbol |
SOX1
|
Name |
(RefSeq) transcription factor SOX-1
|
KO |
K09267 | transcription factor SOX1/3/14/21 (SOX group B) |
|
Organism |
ptr Pan troglodytes (chimpanzee)
|
Brite |
KEGG Orthology (KO) [BR:ptr00001]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:ptr03000]
100615508 (SOX1)
Transcription factors [BR:ptr03000]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
100615508 (SOX1)
|
SSDB |
|
Motif |
|
Other DBs |
|
LinkDB |
|
Position |
14:117702323..117706289
|
AA seq |
389 aa
MYSMMMETDLHSPGGAQAPTNLSGPAGAGGGGGGGGGGGGGAKANQDRVKRPMNAFMVWS
RGQRRKMAQENPKMHNSEISKRLGAEWKVMSEAEKRPFIDEAKRLRALHMKEHPDYKYRP
RRKTKTLLKKDKYSLAGGLLAAGAGGGGAAVAMGVGVGVGAAAVGQRLESPGGAAGGGYA
HVNGWANGAYPGSVAAAAAAAAMMQEAQLAYGQHPGAGGAHPHAHPAHPHPHHPHAHPHN
PQPMHRYDMGALQYSPISNSQGYMSASPSGYGGLPYGAAAAAAAAAGGAHQNSAVAAAAA
AAAASSGALGALGSLVKSEPSGSPPAPAHSRAPCPGDLREMISMYLPAGEGGDPAAAAAA
AAQSRLHSLPQHYQGAGAGVNGTVPLTHI |
NT seq |
1170 nt +upstreamnt +downstreamnt
atgtacagcatgatgatggagaccgacctgcactcgcccggcggcgcccaggcccccacg
aacctctcgggccccgccggggcgggcggcggcgggggcggaggcgggggcggcggcggg
ggcgccaaggccaaccaggaccgggtcaagcggcccatgaacgccttcatggtgtggtcc
cgcgggcagcggcgcaagatggcccaagagaaccccaagatgcacaactccgagatcagc
aagcgcctgggggccgaatggaaggtcatgtccgaggccgagaagcggccgttcatcgac
gaggccaagcggctgcgcgcgctgcacatgaaggagcacccggattacaagtaccggccg
cgccgcaagaccaagacgctgctcaagaaggacaagtactcgctggccggcgggctcctg
gcggccggcgcgggtggcggcggcgcggctgtggccatgggcgtgggcgtgggcgtgggc
gcggcggccgtgggccagcgcctggagagcccaggcggcgcggcgggcggcggctacgcg
cacgtcaacggctgggccaacggcgcctaccccggctcggtggcggcggcggcggcggcc
gcggccatgatgcaggaggcgcagctggcctacgggcagcacccgggcgcgggcggcgcg
cacccgcacgcgcaccccgcgcacccgcacccgcaccacccgcacgcgcacccgcacaac
ccgcagcccatgcaccgctacgacatgggcgcgctgcagtacagtcccatctccaactcg
cagggctacatgagcgcgtcgccctcgggctacggcggcctcccctacggcgccgcggcc
gctgccgccgccgctgcgggcggcgcgcaccagaactcggccgtggcggcggcggcggcg
gcggcggccgcgtcgtctggcgccctgggcgcgctgggctctctggtgaagtcggagccg
agcggcagcccgcccgccccagcgcactcgcgggcgccgtgccccggggacctgcgcgag
atgatcagcatgtacttgcccgccggcgaggggggcgacccggcggcggcagcagcggcc
gcggcgcagagccggctgcactcgctgccgcagcactaccagggcgcgggcgcgggcgtg
aacggcacggtgcccctgacgcacatctag |