Pan troglodytes (chimpanzee): 100615531
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Entry
100615531 CDS
T01005
Name
(RefSeq) LOW QUALITY PROTEIN: cleavage and polyadenylation specificity factor subunit 5-like
KO
K14397
cleavage and polyadenylation specificity factor subunit 5
Organism
ptr
Pan troglodytes (chimpanzee)
Pathway
ptr03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
ptr00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
100615531
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ptr03019
]
100615531
Messenger RNA biogenesis [BR:
ptr03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Pre-mRNA cleavage factor Im (CFIm)
100615531
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Gene cluster
GFIT
Motif
Pfam:
NUDIX_2
Motif
Other DBs
NCBI-GeneID:
100615531
NCBI-ProteinID:
XP_054517772
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Position
9:complement(119059818..119077348)
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AA seq
249 aa
AA seq
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MGVVPVSYLQVENDMLTTEGEPDQFSNKYIQQTKPLILEHTIKLYPIINYTFGTKEPLYE
KDSSVSSRFQQMREELDKIGMRSNIEGDSDCLQALVWLLYVLLLLLGATFFKLPDGELSP
GKGEVEGLKCLMTGILSHQDGVLKDARLGHCIGNWWRPXYPYIPAYITKPKEHKKLFLAQ
LQEKALFAISKNYKLIATPLFELYNNALGYGPIVCSLPQLLSSFKFIYNGIPVQWRSKRS
HFCEHSYTV
NT seq
751 nt
NT seq
+upstream
nt +downstream
nt
atgggcgtggtccctgtctcctacctgcaagtggaaaatgatatgctgaccacagaggga
gagcccgatcagttcagcaacaagtacatccagcagaccaagcccctcatcctggagcac
accatcaaattgtatcctattatcaattatacttttggtacaaaagagcccctctatgag
aaagacagctctgtctcatccagatttcagcaaatgagggaagaattggataaaattgga
atgaggagtaacatagaaggggattctgattgtttacaagcactggtgtggctactctat
gtattactgctactgctgggagcaactttcttcaagttacctgatggtgaacttagccca
ggaaaaggtgaagttgaaggactaaaatgcttaatgactgggatactgagtcatcaagat
ggagttctgaaagatgcaagactgggccatactgcattggtaactggtggagaccaaata
tccatatattcctgcatatattacaaagcctaaggaacataagaagttgtttctggctca
acttcaagaaaaagccttgtttgcaatctctaaaaattacaagctcatagctacaccatt
gtttgaattgtataacaatgcactagggtatggacctattgtttgcagtctccctcagct
gttgagcagtttcaaatttatatacaatggaattcctgtgcagtggagaagtaaaagaag
ccatttctgtgaacatagctatacagtgtag
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