Pan troglodytes (chimpanzee): 104001100
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Entry
104001100 CDS
T01005
Symbol
SYNGAP1
Name
(RefSeq) ras/Rap GTPase-activating protein SynGAP isoform X1
KO
K17631
Ras/Rap GTPase-activating protein SynGAP
Organism
ptr
Pan troglodytes (chimpanzee)
Pathway
ptr04014
Ras signaling pathway
Brite
KEGG Orthology (KO) [BR:
ptr00001
]
09130 Environmental Information Processing
09132 Signal transduction
04014 Ras signaling pathway
104001100 (SYNGAP1)
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Gene cluster
GFIT
Motif
Pfam:
DAB2P_C
RasGAP
C2
PH
Exonuc_VII_L
PH_6
Motif
Other DBs
NCBI-GeneID:
104001100
NCBI-ProteinID:
XP_009449306
Ensembl:
ENSPTRG00000033928
VGNC:
12705
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Position
6:32936101..32969742
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AA seq
1345 aa
AA seq
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MSRSRASIHRGSIPAMSYAPFRDVRGPSMHRTQYVHSPYDRPGWNPRFCIISGNQLLMLD
EDEIHPLLIRDRRSESSRNKLLRRTVSVPVEGRPHGEHEYHLGRSRRKSVPGGKQYSMEG
APAAPFRPSQGFLSRRLKSSIKRTKSQPKLDRTSSFRQILPRFRSADHDRARLMQSFKES
HSHESLLSPSSAAEALELNLDEDSIIKPVHSSILGQEFCFEVTTSSGTKCFACRSAAERD
KWIENLQRAVKPNKDNSRRVDNVLKLWIIEARELPPKKRYYCELCLDDMLYARTTSKPRS
ASGDTVFWGEHFEFNNLPAVRALRLHLYRDSDKKRKKDKAGYVGLVTVPVATLAGRHFTE
QWYPVTLPTGSGGSGGMGSGGGGGSGGGSGGKGKGGCPAVRLKARYQTMSILPMELYKEF
AEYVTNHYRMLCAVLEPALNVKGKEEVASALVHILQSTGKAKDFLSDMAMSEVDRFMERE
HLIFRENTLATKAIEEYMRLIGQKYLKDAIGEFIRALYESEENCEVDPIKCTASSLAEHQ
ANLRMCCELALCKVVNSHCVFPRELKEVFASWRLRCAERGREDIADRLISASLFLRFLCP
AIMSPSLFGLMQEYPDEQTSRTLTLIAKVIQNLANFSKFTSKEDFLGFMNEFLELEWGSM
QQFLYEISNLDTLTNSSSFEGYIDLGRELSTLHALLWEVLPQLSKEALLKLGPLPRLLND
ISTALRNPNIQRQPSRQSERPRPQPVVLRGPSAEMQGYMMRDLNSSIDLQSFMARGLNSS
MDMARLPSPTKEKPPPPPPGGGKDLFYVSRPPLARSSPAYCTSSSDITEPEQKMLSVNKS
VSMLDLQGDGPGGRLNSSSVSNLAAVGDLLHSSQASLTAALGLRPAPAGRLSQGSGSSIT
AAGMRLSQMGVTTDGVPAQQLRIPLSFQNPLFHMAADGPGPPGGHGGGGGHGPPSSHHHH
HHHHHHRGGEPPGDTFAPFHGYSKSEDLSSGVPKPPAASILHSHSYSDEFGPSGTDFTRR
QLSLQDNLQHMLSPPQITIGPQRPAPSGPGGGSGGGSGGGGGGQPPPLQRGKSQQLTVSA
AQKPRPSSGNLLQSPEPSYGPARPRQQSLSKEGSIGGSGGSGGGGGGGLKPSITKQHSQT
PSTLNPTMPASERTVAWVSNMPHLSADIESAHIEREEYKLKEYSKSMDESRLDRVKEYEE
EIHSLKERLHMSNRKLEEYERRLLSQEEQTSKILMQYQARLEQSEKRLRQQQAEKDSQIK
SIIGRLMLVEEELRRDHPAMAEPLPEPKKRLLDAQVEITMSFIFSVSHPHPSHCLSCTHY
TSHLAPSPSVSHSLLFVHWLLLAAP
NT seq
4038 nt
NT seq
+upstream
nt +downstream
nt
atgagcaggtctcgagcctccatccatcgggggagcatccccgcgatgtcctatgccccc
ttcagagatgtacggggaccctctatgcaccgaacccaatacgttcattccccgtatgat
cgtcctggttggaaccctcggttctgcatcatctcggggaaccagctgctcatgctggat
gaggacgagatacaccccctactgatccgggaccggaggagcgagtccagtcgcaacaaa
ctgctgagacgcacagtctccgtgccggtggaggggcggccccacggcgagcatgaatac
cacttgggtcgctcgaggaggaagagtgtcccaggggggaagcagtacagcatggagggt
gcccctgctgcgcccttccggccctcgcaaggcttcctgagccgacggctaaaaagctcc
atcaaacgaacgaagtcacaacccaaacttgaccggaccagcagctttcgccagatcctg
cctcgcttccgaagtgctgaccatgaccgggcccggctgatgcaaagctttaaggagtca
cactctcatgagtccttgctgagtcctagcagtgcagctgaggcattggagctcaacttg
gatgaagattccattatcaagccagtgcacagctccatcctgggccaggagttctgtttt
gaggtaacaacttcatcaggaacaaaatgctttgcctgtcggtctgcggccgaaagagac
aaatggattgagaatctgcagcgggcagtaaagcccaacaaggacaacagccgccgggta
gacaatgtgctaaagctgtggatcatagaggcccgggagctgccccccaagaagcggtac
tactgtgagctctgcctggatgacatgctgtatgcacgcaccacctccaagccccgctct
gcatctggggacaccgtcttctggggcgagcacttcgagtttaacaacctgccggctgtc
cgtgccctgcggctgcatctgtaccgtgactcagacaaaaagcgcaagaaggacaaggca
ggctatgtcggcctggtgactgtgccagtggccaccctggctgggcgccacttcacagag
cagtggtaccctgtaaccctgccaacaggcagtgggggatctgggggcatgggttcggga
gggggagggggctcggggggtggctcagggggcaagggcaaaggaggttgcccggctgtg
cggctgaaagcacgttaccagacaatgagcatcttgcccatggagctatataaagagttt
gcagagtatgtcaccaaccattatcggatgctgtgtgcagtcttggagcccgccctgaat
gtcaaaggcaaggaggaggttgccagtgcactagttcacatcctgcagagtacaggcaag
gccaaggacttcctttcagacatggccatgtctgaggtagaccggttcatggaacgggag
cacctcatattccgtgagaacacgcttgccactaaagccatagaagagtatatgagactg
attggtcagaaatacctcaaggatgccattggagagttcatccgtgctctgtatgaatct
gaggaaaactgcgaggtagaccctatcaagtgcacagcatccagtttggcagagcaccag
gccaacctgcgaatgtgctgtgagttggccctgtgcaaggtggtcaactcccactgcgtg
ttcccgagggagctgaaggaggtgtttgcttcgtggcggctgcgctgcgcagagcgaggc
cgggaggacatcgcagacaggcttatcagcgcctcactcttcctgcgcttcctctgccca
gcgattatgtcgcccagtctctttgggcttatgcaggagtacccagatgagcagacctca
cgaaccctcaccctcattgccaaggtcatccagaacctggccaacttttccaagtttacc
tcaaaggaggactttctgggcttcatgaatgagtttctggagctggaatggggttccatg
cagcagtttttgtatgagatctccaatctggacacgctaaccaacagcagtagctttgag
ggttacatcgacttgggccgagagctctccacactgcatgccctactctgggaggtgctg
ccccagctcagcaaggaagccctcctgaagctgggtccactgccccggctcctcaacgac
atcagcacagctctgaggaaccccaacatccaaaggcagccaagccgccagagtgagcgg
ccccggcctcagcctgtggtactgcgggggccatcggctgagatgcagggctacatgatg
cgggacctcaacagctccatcgaccttcagtccttcatggctcgaggcctcaacagctct
atggatatggctcgcctcccctccccaaccaaggaaaagccacccccaccaccgcctggt
gggggtaaagacctgttctatgtaagccgtccacccctggcccgttcctcaccagcatac
tgcacgagcagctcggacatcacagagccagagcagaagatgctgagtgtcaacaagagt
gtgtccatgctggacttacagggtgatgggcctggtggccgcctcaacagcagcagtgtt
tcgaacctggcggccgtaggggacctgctgcactcaagccaggcctcgctgacagcagcc
ttggggctacggcctgcgcctgccggacgcctctcccaggggagtggctcatccatcacg
gcggctggcatgcgcctcagccagatgggtgtcaccacagacggtgtccctgcccagcaa
ctgcgaatccccctctccttccagaaccctctcttccacatggctgctgatgggccaggt
cccccaggcggccatggagggggcggtggccatggcccaccttcctcccatcaccaccac
caccaccatcaccaccaccgaggtggagagccccctggggacacctttgccccattccat
ggctatagcaagagtgaggacctctcttctggggtccccaagccccctgctgcctccatc
cttcatagccacagctacagtgatgagtttggaccctctggcactgacttcacccgtcgg
cagctttcactccaggacaacctgcagcacatgctgtcccctccccagatcaccattggt
ccccagaggccagccccctcagggcctggaggtgggagcggtgggggcagcggtgggggt
ggcgggggccagccgcctccattgcagaggggcaagtctcagcagttgacagtcagcgca
gcccagaaaccccggccatccagcgggaatctattgcagtccccagagccaagttatggc
cccgcccgtccacggcaacagagcctcagcaaggagggcagcattgggggcagcgggggc
agcggtggcggagggggtggggggctgaagccctccatcaccaagcagcattctcagaca
ccatccacattgaaccccacaatgccagcctctgagcggacagtggcctgggtctccaat
atgcctcacctgtcggctgacatcgagagtgcgcacatcgagcgggaagagtacaagctc
aaggagtactcaaaatcgatggatgagagccggctggatagggtgaaggagtacgaggag
gagattcactcactgaaagagcggctgcacatgtccaaccggaagctggaagagtatgag
cggaggctgctgtcccaggaagaacaaaccagcaaaatcctgatgcagtatcaggcccga
ctggagcagagtgagaagaggctaaggcagcagcaggcagagaaggattcccagatcaag
agcatcattggcaggctgatgctggtggaggaggagctgcgccgggaccaccccgccatg
gctgagccgctgccagaacccaagaagaggctgctcgacgctcaggtggaaattacaatg
tcatttatcttctccgtgtcccatccccatccatcccactgtctttcgtgcactcactac
accagccacctagccccatcaccatctgtctctcatagtctgctgtttgtccactggctg
ctcctggcagccccctag
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