Pan troglodytes (chimpanzee): 107969798
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Entry
107969798 CDS
T01005
Symbol
CNOT3
Name
(RefSeq) CCR4-NOT transcription complex subunit 3 isoform X1
KO
K12580
CCR4-NOT transcription complex subunit 3
Organism
ptr
Pan troglodytes (chimpanzee)
Pathway
ptr03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ptr00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
107969798 (CNOT3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ptr03019
]
107969798 (CNOT3)
Messenger RNA biogenesis [BR:
ptr03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
107969798 (CNOT3)
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
107969798 (CNOT3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Not3
NOT2_3_5_C
Cluap1
DUF4407
Motif
Other DBs
NCBI-GeneID:
107969798
NCBI-ProteinID:
XP_016792257
Ensembl:
ENSPTRG00000011444
ENSPTRG00000046717
VGNC:
10973
LinkDB
All DBs
Position
20:56958392..56976475
Genome browser
AA seq
771 aa
AA seq
DB search
MADKRKLQGEIDRCLKKVSEGVEQFEDIWQKLHNAANANQKEKYEADLKKEIKKLQRLRD
QIKTWVASNEIKDKRQLIDNRKLIETQMERFKVVERETKTKAYSKEGLGLAQKVDPAQKE
KEEVGQWLTNTIDTLNMQVDQFESEVESLSVQTRKKKGDKDQKQDRIEGLKRHIEKHRYH
VRMLETILRMLDNDSILVDAIRKIKDDVEYYVDSSQDPDFEENEFLYDDLDLEDIPQALV
ATSPPSHSHMEDEIFNQSSSTPTSTTSSSPIPPSPANCTTENSEDDKKRGRSTDSEVSQS
PAKNGSKPVHSNQHPQSPAVPPTYPSGPPPAASALSTTPGNNGVPAPAAPPSALGPKASP
APSHNSGTPAPYAQAVAPPAPSGPSTTQPRPPSVQPSGGGGGGSGGGGSSSSSNSSAGGG
AGKQNGATSYSSVVADSPAEVALSSSGGNNASSQALGPPSGPHNPPPSTSKEPSAAAPTG
AGGVAPGSGNNSGGPSLLVPLPVNPPSSPTPSFSDAKAAGALLNGPPQFSTAPEIKAPEP
LSSLKSMAERAAISSGIEDPVPTLHLTERDIILSSTSAPPASAQPPLQLSEVNIPLSLGV
CPLGPVPLTKEQLYQQAMEEAAWHHMPHPSDSERIRQYLPRNPCPTPPYHHQMPPPHSDT
VEFYQRLSTETLFFIFYYLEGTKAQYLAAKALKKQSWRFHTKYMMWFQRHEEPKTITDEF
EQIPDHLLVHSLTAFSPGQGTYIYFDYEKWGQRKKEGFTFEYRYLEDRDLQ
NT seq
2316 nt
NT seq
+upstream
nt +downstream
nt
atggcggacaagcgcaaactccaaggtgagattgatcgctgcctcaagaaggtgtccgag
ggcgtggagcagtttgaagatatttggcagaagctccacaatgcagccaacgcaaaccag
aaagaaaagtatgaggctgacctaaagaaggagattaagaagctacaacggctgagggac
cagatcaagacatgggtagcgtccaacgagatcaaggacaagaggcagcttatagacaac
cgcaagctcattgagacgcaaatggaacggttcaaagttgtggaacgagagaccaaaacc
aaagcttacagcaaggagggcctgggcctggcccagaaggtagatcctgcccagaaggag
aaggaagaggttggccagtggctcacgaataccatcgacacgctcaacatgcaggtggac
cagtttgagagtgaagtggagtcactgtcagtgcagacacgcaagaagaagggcgacaag
gatcagaagcaggaccggattgagggcttgaagcggcacatcgagaagcaccgctaccac
gtgcgcatgctagagaccatcctgcgcatgctggacaatgactccatcctcgttgacgcc
atccgcaagatcaaggacgacgttgagtactatgttgactcatcccaggaccccgacttc
gaggagaacgagtttctctacgatgacctggacctcgaggacattccacaggcgctggtc
gccacctccccccccagccacagccacatggaggatgagatcttcaaccagtccagcagc
acgcccacctcaaccacctccagctctcccatcccgcccagcccagccaactgtaccacg
gaaaactctgaagatgataagaagaggggacgttccacagacagtgaagtcagccagtct
ccagccaaaaacggctccaagcctgtccacagcaaccagcaccctcagtccccagctgtg
ccgcccacctacccctccggccccccgcctgctgcctctgccttgagcaccactcctggc
aacaatggggtccccgccccagcagcacccccaagtgccctgggccccaaggccagtcca
gctcccagccacaactcgggcacccctgctccctatgcccaggctgtggccccaccagct
cccagtgggcccagcacgacccagccccggccccccagcgtccagcctagcggaggcgga
ggaggcggcagcggaggcggagggagcagcagcagtagtaacagcagtgccggtggaggg
gctggcaagcagaatggcgccaccagttacagctcagttgtggcagacagcccggcagag
gtggctttgagcagcagtgggggcaacaatgccagcagccaggccttgggccccccttcc
ggcccccacaacccacctcccagcacctcgaaggaacccagtgcggcagccccaacgggg
gctgggggcgtggccccaggctcagggaacaactcagggggacccagcctcctggtgcca
ctgcctgtgaatcctcccagctccccaacgcccagcttcagtgatgccaaggcagccggt
gccctgctcaatgggcctccacagttcagcaccgccccggaaatcaaggcccctgagcct
ctgagctccttgaagtccatggcggaacgggcagccatcagctctggcattgaggaccct
gtgccaacgctgcacctgaccgagcgagacatcatcctgagcagtacatcagcacctccg
gcctcagcccagccgcccctgcagctgtcagaggtgaacataccgctgtcgctgggtgtc
tgtccactgggccctgtgcccctcaccaaggagcagctctatcagcaggccatggaagag
gccgcctggcaccacatgcctcacccctctgactctgagcgtatccggcagtacctcccc
cggaacccctgtccgacgcccccctaccaccaccagatgccacccccacactcggacact
gtggagttctaccagcgcctgtcgaccgagacactcttcttcatcttctactatctggag
ggcactaaggcacagtacctggcagccaaggccctaaagaagcagtcatggcgattccac
accaagtacatgatgtggttccagaggcacgaggagcccaagaccatcactgacgagttc
gagcagatcccagaccacctcctcgtccactcactgaccgccttctcccccggccagggc
acctacatctactttgactacgagaagtggggccagcggaagaaggaaggcttcaccttt
gagtaccgctacctggaggaccgggacctccagtga
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