Pan troglodytes (chimpanzee): 107974193
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Entry
107974193 CDS
T01005
Name
(RefSeq) LOW QUALITY PROTEIN: RNA-binding protein with serine-rich domain 1-like
KO
K14325
RNA-binding protein with serine-rich domain 1
Organism
ptr
Pan troglodytes (chimpanzee)
Pathway
ptr03013
Nucleocytoplasmic transport
ptr03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
ptr00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
107974193
03015 mRNA surveillance pathway
107974193
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ptr03019
]
107974193
Messenger RNA biogenesis [BR:
ptr03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
107974193
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
RRM_7
RRM_5
RRM_3
RRM_ACIN1
RRM_occluded
Nup35_RRM_2
RBD_AKAP-17A
RRM_MUD2_C
Motif
Other DBs
NCBI-GeneID:
107974193
NCBI-ProteinID:
XP_054538748
LinkDB
All DBs
Position
3:11828053..11833200
Genome browser
AA seq
305 aa
AA seq
DB search
MDLSGVKKKSLLGVKENNKKSSTRAPSPTKRKDRSDEKSKDRSKDIGATKESSKKDRGRD
KTRKRRSASSGSSSTRSRSSSTSSPGSSTSTGSSSGSSSSSASSRSGSSSTSRSSSSSSS
SGSPSPSRRRHDNRRRSRSKSKPPKRDEKERKRRSPSPKPTKVHIGRLTRNVTKDHIMEI
FSTYGKIKMIDMPVERMQPHLSKGYAYVEFENPDEAEKALKHMDGGQIDGQEITATAVLA
PWPRPPPRRFSPPRRMLPPPPMWRRSPPRMRRWSRSXRRRSPVRRRSRSPGRRRHRSRSS
SNSSR
NT seq
917 nt
NT seq
+upstream
nt +downstream
nt
atggatttatcaggagtgaaaaagaagagcttgctaggagtcaaagaaaataataaaaaa
tccagcactagggccccttcacctaccaaacgcaaagaccgctcagatgagaagtccaag
gatcgctcaaaagatataggggccaccaaggagtcgagtaagaaggatcgcggccgggac
aaaacgcgaaagaggcgcagcgcttccagtggtagcagcagtaccaggtctcggtccagc
tcgacttccagcccaggctccagcaccagcactggctcaagcagtggctccagctcttcc
tcagcatccagccgctcaggaagctccagcacctcccgcagctccagctctagcagctct
tctggctctccaagtccttctcggcgcagacacgacaacaggaggcgctcccgctccaaa
tccaaaccacctaaaagagatgaaaaggagaggaaaaggcggagcccatctcctaagccc
accaaagtgcacattgggagactcaccaggaatgtgacaaaggatcacatcatggagata
ttttccacctatgggaaaattaaaatgattgacatgcccgtggaaaggatgcaaccccat
ctgtccaaaggctatgcgtacgtagagtttgagaatccagatgaagctgagaaggcgctg
aagcacatggatggaggacaaattgatggccaggagatcactgccaccgccgtgctggcc
ccctggcctaggccaccccccaggagattcagccctcccaggagaatgttgccaccaccg
cctatgtggcgcaggtctcccccacggatgaggagatggtcccgctcacgaggcgcaggt
cccccgtgcgccggagatcacggtccccgggccgccgccgccacaggagccgctccagct
ccaactcctcccgataa
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