Pan troglodytes (chimpanzee): 107974885
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Entry
107974885 CDS
T01005
Name
(RefSeq) protocadherin beta-18
KO
K16494
protocadherin beta
Organism
ptr
Pan troglodytes (chimpanzee)
Brite
KEGG Orthology (KO) [BR:
ptr00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
ptr04515
]
107974885
Cell adhesion molecules [BR:
ptr04515
]
Cadherins
Protocadherins
107974885
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
Cadherin_C_2
Cadherin_CELSR2_9th
Motif
Other DBs
NCBI-GeneID:
107974885
NCBI-ProteinID:
XP_016809443
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Position
4:138951685..138959609
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AA seq
788 aa
AA seq
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MEPGKGRAQPTRQVLLFFVFLGGSLVYSETWSYSIAEEMEVGTFIANVVKDMGLDVEDLA
ARGARVIFDDYKPYLRLDPQNGDLLLNEQLDREALCDLTEPCILHFQVLFENPLQFFRAE
LLVKDINDHTPTFLNNHILLKISEGATLGTLFQIDSAQDLDVGKNGVQNYTISPNPHFHL
KLRDGDEGRKYPELVLDQSLDREKESQLSLTLTAVDGGSPPRSGTTLINVVVLDINDNAP
EFEKPVYEVHVPESSPLDSLIIKASATDLDAGINGELSYSFSHVSRDVRKTFEIHPISGE
VYLKAPLDFEIIQSYIINIQAIDGGSLSGKSSILVRVVDVNDNPPEIAMTSLTSPIPENS
SPEMVVAVFSIRDQDAGDNGRMVGSIQDNLPFVLKPTFKNFYALVTEHPLDREVRNEYNI
TITVTDLGTPRLKTQHNITVLVSDVNDNAPAFTQTSYTLFVRENNSPALHIGSVSATDRD
SGTNAQVTYSLLPPQDPHLPLASLVSINTDNGHLFALRSLDYEALQAFEFHVGATDRGSP
ALSSEALVRVLVLDANDNSPFVLYPLQNGSAPCTELVPRAAEPGYLVTKVVAVDGDSGQN
AWLSYQLLKATEPGLFGVWAHNGEVRTARLLSERDVAKHRLVVLVKDNGEPPRSATATLQ
VLLVDGFSQPYLPLPEAAPSQAQADSLTVYLVVALASVSSLFLFSVFLFVAVRLCRRSRA
ASVGRCSVPEGPFPGHLLDVSGTGTLSQSYQYEVCLTGGSGANEFKFLKPVIPNLLSRDS
DMEKAPPF
NT seq
2367 nt
NT seq
+upstream
nt +downstream
nt
atggagccgggaaagggaagagctcagccgacaaggcaagtgctgcttttctttgttttc
ctgggagggtctttggtgtattctgagacctggagctattccatagcagaggaaatggag
gtcggcacctttatagccaacgtggtgaaagacatgggtttggatgtggaagacctggct
gcacggggggccagagtcatctttgacgactataaaccttatttgcgattggatccacag
aatggcgacttgctcttaaacgagcagctggaccgggaggcactttgtgatctcacagag
ccatgtatattgcatttccaggtgttatttgaaaatccgttgcaattttttcgggctgag
cttttggtcaaagacataaatgatcacactcccacgttcctaaacaatcatatacttcta
aaaatctccgaaggtgctactctaggaaccttattccaaatagatagtgcgcaggacttg
gatgtgggaaagaatggtgttcaaaactatacaataagtcccaatccccatttccacctt
aaattacgggacggcgatgagggcagaaaatatccagagttggtactggaccaatccctg
gatcgagaaaaggagtctcagcttagtttaacgctaacagccgtggatggcgggtctccg
cccaggtctgggactacactgattaacgttgtggtcctggacatcaatgacaatgcccct
gaatttgagaagccagtctatgaagttcatgtacctgagagcagccctctggactccttg
atcatcaaagcgtctgctacagatttagatgcaggaataaatggagaactgtcttattca
ttttcccacgtctccagagatgtacggaaaacatttgaaatccatccaatttctggcgaa
gtctatttaaaagcccctctagatttcgagattattcaatcttatataataaatattcag
gccattgacggtgggagcctttctggaaaatcaagcattttagttcgggttgtagatgtg
aatgacaacccgccagaaatagccatgacatctcttaccagccccataccggaaaactct
tcacctgagatggtggtcgctgttttcagcatacgagaccaagacgctggagacaatggg
agaatggttggctcaattcaggacaacctccccttcgtcttgaagcctaccttcaagaat
ttttacgctctggtaacagagcacccactggacagagaggtcagaaatgaatataacatc
accatcaccgtgaccgacttggggacacccaggctgaaaacccagcacaacataaccgtg
ctggtctccgacgtcaatgacaacgcccccgccttcacccaaacctcctacaccctgttc
gtccgcgagaacaacagccccgccctgcacatcggcagtgtcagcgccacagacagagac
tcaggcaccaacgcccaggtcacctactcgctgctgccgccccaggacccgcacctgccc
ctcgcctccctggtctccatcaacacagacaacggccacctattcgccctcaggtctttg
gactacgaggccctgcaggctttcgagttccacgtgggcgccacagaccgcggctccccg
gcgttgagcagcgaggcgctggtgcgcgtgctggtgctggacgccaacgacaactcgccc
ttcgtgctgtacccgctgcagaacggctcggcgccctgcaccgagctggtaccccgggcg
gccgagccgggctacctggtgaccaaggtggtggcggtggacggcgactcgggccagaac
gcctggctgtcgtaccagctgctcaaggccacagagcccgggctgttcggcgtgtgggcg
cacaatggcgaggtgcgcaccgccaggctgctgagcgagcgcgacgtggccaagcacagg
ctagtggtgctggtcaaggacaatggcgagcctccgcgctcggccaccgccacgctgcaa
gtgctcctggtggacggcttctcccagccctacctgcctctcccggaggcggccccctcc
caggcccaggccgactcgctcaccgtctacctggtggtggcgttggcctcggtgtcgtcg
cttttcctcttctcggtgttcctgttcgtggcggtgcggctgtgcaggaggagcagggcg
gcctcggtgggtcgctgctcggtgcccgagggcccctttccagggcatctgctggacgtg
agcggcaccgggaccctatcccagagctaccagtacgaggtgtgtctgacgggaggctca
ggagcaaatgagttcaagttcctgaagccggtgattcccaatctcctgtcccgcgacagc
gacatggagaaagccccacctttctga
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