Pan troglodytes (chimpanzee): 112204076
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Entry
112204076 CDS
T01005
Symbol
PRPF40B
Name
(RefSeq) pre-mRNA-processing factor 40 homolog B
KO
K12821
pre-mRNA-processing factor 40
Organism
ptr
Pan troglodytes (chimpanzee)
Pathway
ptr03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ptr00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
112204076 (PRPF40B)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ptr03041
]
112204076 (PRPF40B)
Spliceosome [BR:
ptr03041
]
Complex A
U1 snRNP components
U1 related factors
112204076 (PRPF40B)
Complex B
112204076 (PRPF40B)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FF
WW
WW_TCERG1
DUF4936
RhoGAP-FF1
WW_2
Motif
Other DBs
NCBI-GeneID:
112204076
NCBI-ProteinID:
NP_001349306
VGNC:
5547
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All DBs
Position
10:complement(46223362..46299565)
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AA seq
870 aa
AA seq
DB search
MMPPPFMPPPGIPPPFPPMGLPPMSQRPPAIPPMPPGILPPMLPPMGAPPPLTQIPGMVP
PMMPGMLMPAVPVTAATAPGADTASSALAGTGPPRALWSEHVAPDGRIYYYNADDKQSVW
EKPSVLKSKAELLLSQCPWKEYKSDTGKPYYYNNQSKESRWTRPKDLDDLEVLVKQEAAG
KQQQQLPQTLQPQPPQPQPDPPPVPPGPTPVPTGLLEPEPGGSEDCDVLEATQPLEQGFL
QQLEEGPSSSGQHQPQQEEEESKPEPERSGLSWSNREKAKQAFKELLRDKAVPSNASWEQ
AMKMVVTDPRYSALPKLSEKKQAFNAYKAQREKEEKEEARLRAKEAKQTLQHFLEQHERM
TSTTRYRRAEQTFGELEVWAVVPERDRKEVYDDVLFFLAKKEKEQAKQLRRRNIQALKSI
LDGMSSVNFQTTWSQAQQYLMDNPSFAQDHQLQNMDKEDALICFEEHIRALEREEEEERE
RARLRERRQQRKNREAFQTFLDELHETGQLHSMSTWMELYPAVSTDVRFANMLGQPGSTP
LDLFKFYVEELKARFHDEKKIIKDILKDRGFCVEVNTAFEDFAHVISFDKRAAALDAGNI
KLTFNSLLEKAEAREREREKEEARRMRRREAAFRSMLRQAVPALELGTAWEEVRERFVCD
SAFEQITLESERIRLFREFLQVLETECQHLHTKGRKHGRKGKKHHHKRSHSPSGSESEEE
ELPPPSLRPPKRRRRNPSESGSEPSSSLDSVESGGAALGGRGSPSSHLLGADHGLRKAKK
PKKKTKKRRHKSNSPESETDPEEKAGKESDEKEQEQDKDRELQQAELPNRSPGFGIKKEK
TGWDTSESELSEGELERRRRTLLQQLDDHQ
NT seq
2613 nt
NT seq
+upstream
nt +downstream
nt
atgatgccaccacccttcatgccccctccagggatccccccaccctttcctccgatgggg
ctaccccccatgagtcagagaccaccagctatcccccccatgccacctggcatcctgccc
ccaatgcttccaccaatgggggcgccaccaccactcacacagataccaggaatggtacct
ccgatgatgccaggaatgctgatgccagcggtgcctgtcaccgcagcgacggctccgggt
gcggacaccgccagctctgctgtggctgggacaggccctccgagggccctatggagtgag
catgtggccccagatgggcgcatctactactacaatgctgacgacaagcagtccgtgtgg
gagaagcccagcgtgctcaagtccaaggcagagctgctcctgtcccaatgtccctggaaa
gagtacaagtcggacacaggcaaaccttattactataacaaccagagtaaagagtctcgc
tggacccggcccaaggatctggatgacctagaggttctagtcaaacaagaggctgcaggg
aaacagcagcagcagctgccacagacacttcagccacagccgcctcagccacagcctgac
cccccacctgtacctcctggccccaccccagtgcccacaggcctcctggaacctgagcca
ggtgggagtgaagactgtgatgtgttggaggccacccagcccctggaacaggggttcttg
cagcagctggaggagggccccagcagttctggacagcatcagccacagcaggaggaggag
gaatcaaagccagaaccagagaggtctggcctcagttggagcaaccgggagaaggcaaag
caggcattcaaggaactgctgagggacaaggctgtcccctccaatgcctcatgggaacag
gccatgaagatggtggtcaccgacccccgttacagtgccttgcctaaactgagtgagaaa
aagcaggcattcaatgcctacaaggcgcagcgggagaaggaggagaaggaggaggcccgg
ctaagggccaaagaggccaagcagaccctgcagcatttcctggagcagcatgaacgcatg
acctccaccacccgctaccggcgggcagaacagacctttggggagctggaggtctgggct
gtggtccctgagagggatcgaaaagaggtttatgatgatgtcctcttcttcctggccaag
aaggagaaggaacaggccaagcagctccggcgccgcaatatccaggccctaaagagcatc
ctggatgggatgagtagtgtcaacttccaaactacgtggtcccaggcccagcagtacctc
atggataaccccagctttgctcaggaccatcagctgcagaacatggacaaggaagatgca
ctgatctgttttgaggagcacatccgagctttggagagggaagaggaggaggaacgggag
cgggcccggcttcgggagcgacgccaacaacgcaagaatcgggaggccttccagaccttc
ctggacgagctgcatgagacagggcagctgcactctatgtccacctggatggagctatat
ccagcagtcagcactgatgtccgctttgccaacatgctgggccagccgggctccacccct
ctggacttattcaagttctatgtggaggagttgaaggcacgattccatgatgaaaagaag
atcattaaggacatccttaaggaccggggcttctgcgtggaggtgaacacggcctttgag
gacttcgcccacatcataagctttgacaagagggctgccgcactggacgcaggcaacatc
aagctgaccttcaatagtctgctggagaaagcagaggcacgggagagggagcgggagaag
gaggaggcacgcaggatgcggcgcagggaagctgcctttcgaagcatgctgaggcaggct
gtgcctgctctggagctaggcactgcctgggaagaggtccgtgagcgttttgtgtgtgac
tcagcctttgagcagatcaccctggagtcggagcggatccggctcttccgggagttccta
caggtgctggagactgaatgccagcacctccacaccaaaggccgaaagcatggcaggaaa
ggcaagaagcaccatcacaagcgttcccactcaccctcaggctctgagtcagaagaggag
gaactgcccccaccatctctccggccccccaagcggaggaggcggaacccctcagagtca
ggctctgagccctcttcctcacttgattcagttgaaagtgggggtgctgcccttggagga
cggggctccccttcctcccatcttcttggagcagatcatggccttcggaaagccaagaaa
ccaaaaaagaaaactaagaagagaagacacaagtcgaatagtcctgagagtgagacagac
cctgaggagaaagctggcaaggagagcgatgagaaagaacaagaacaggacaaggacagg
gagctccagcaggcagagctccctaaccgttccccaggctttggaatcaagaaggagaag
acaggctgggacacgtcagaaagtgagctgagtgagggtgagctggagaggcggcggcgg
acactcctacagcagctggacgatcaccagtga
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