KEGG   Pan troglodytes (chimpanzee): 129135271
Entry
129135271         CDS       T01005                                 
Symbol
POLR2F
Name
(RefSeq) DNA-directed RNA polymerases I, II, and III subunit RPABC2 isoform X1
  KO
K03014  DNA-directed RNA polymerases I, II, and III subunit RPABC2
Organism
ptr  Pan troglodytes (chimpanzee)
Pathway
ptr03020  RNA polymerase
ptr03420  Nucleotide excision repair
ptr04623  Cytosolic DNA-sensing pathway
ptr05016  Huntington disease
Brite
KEGG Orthology (KO) [BR:ptr00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    129135271 (POLR2F)
  09124 Replication and repair
   03420 Nucleotide excision repair
    129135271 (POLR2F)
 09160 Human Diseases
  09164 Neurodegenerative disease
   05016 Huntington disease
    129135271 (POLR2F)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:ptr03021]
    129135271 (POLR2F)
   03400 DNA repair and recombination proteins [BR:ptr03400]
    129135271 (POLR2F)
Transcription machinery [BR:ptr03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol I, II, III common subunits
     129135271 (POLR2F)
  RNA polymerase III system
   RNA polymerase III
     129135271 (POLR2F)
  RNA polymerase I system
   RNA polymerase I
     129135271 (POLR2F)
DNA repair and recombination proteins [BR:ptr03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      129135271 (POLR2F)
SSDB
Motif
Pfam: RNA_pol_Rpb6
Other DBs
NCBI-GeneID: 129135271
NCBI-ProteinID: XP_009436647
VGNC: 8865
LinkDB
Position
23:39965362..40051470
AA seq 160 aa
MSDNEDNFDGDDFDDVEEDEGLDDLENAEEEGQENVEILPSGERPQANQKRITTPYMTKY
ERARVLGTRALQIAMCAPVMVELEGETDPLLIAMKELKSLGTAHQEVGGREKRRQGKWEG
TDETRTSSGCWNFPVPAAGVLTNILSFFPLLSDIKTFFFL
NT seq 483 nt   +upstreamnt  +downstreamnt
atgtcagacaacgaggacaattttgatggcgacgactttgatgatgtggaggaggatgaa
gggctagatgacttggagaatgccgaagaggaaggccaggagaatgtcgagatcctcccc
tctggggagcgaccgcaggccaaccagaagcgaatcaccacaccatacatgaccaagtac
gagcgagcccgcgtgctgggcacccgagcactccagattgcgatgtgtgcccctgtgatg
gtggagctggagggggagacagatcctctgctcattgccatgaaggaactcaaatcctta
ggaacagctcaccaggaagtaggaggaagagagaagaggaggcagggaaagtgggagggc
actgatgagacacggacgtcttctggctgttggaacttccctgttcctgctgcaggagtc
cttaccaatattctgtcattcttccccctcttgtctgatataaaaactttctttttcttg
taa

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