Pan troglodytes (chimpanzee): 129138202
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Entry
129138202 CDS
T01005
Name
(RefSeq) LOW QUALITY PROTEIN: spectrin beta chain, non-erythrocytic 5-like
KO
K06115
spectrin beta, non-erythrocytic 1/4/5
Organism
ptr
Pan troglodytes (chimpanzee)
Pathway
ptr04517
IgSF CAM signaling
ptr04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
ptr00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
129138202
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
129138202
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
ptr04812
]
129138202
Cytoskeleton proteins [BR:
ptr04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Cross-linking proteins
129138202
Intermediate filaments
Intermediate filament-binding proteins
129138202
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Spectrin
IRF
Motif
Other DBs
NCBI-GeneID:
129138202
NCBI-ProteinID:
XP_054530616
LinkDB
All DBs
Position
21:complement(70680785..70707122)
Genome browser
AA seq
2136 aa
AA seq
DB search
MIGAWSHIHGSAPDAPGLRAAASQATLWQELQVEVKAHQGQVQRVLSSGQSLAASGHPQA
QHIVEQCQELEGHWAELERACEARAQCLQQAVTFQQYFLDVSELEGWVEEKRPLVSSRDY
GRDEAATLRLINKHQALQEELAIYWSSMEELDQTAQTLTGPEVPEQPRVVWERLREQLRA
LQELAATRDRELEGTLRLHEFLREAEDLQGWLASQKQAAKGGESLGEDPEHALHLCTKFA
KFQHQVEMGSQRVAACRLLAESLLEHGHSAGPMVRQRQQDLQAAWSELWELTQARGHALR
DAETTLRVHRDLLEVLTQVQEKATSLPNNVARDLRGLEAQLRSHQGLERELVGTERQLQE
LLETAGRVQKLCLGPQAHAVQQRQQAVTQAWAVLQRRMEQRRAQLERARLLARFRTAVRD
YASWAARMRQDLQVEESSQEPSSGPQKLSAHQWLRAELEAREKLWQQATQLGQQALLAAG
TPTKEVQEELRALQDQRDQVYQAWARKQERLQAEQQEQLFLRECGRLEEILVPQEVSLKT
SALGSSVEEVEQLIGKHEVFLKVLTAQDKKEAALRERLKTLRRPRVRDRLPILLQRRVRV
KELAESRGHALHASLLMASFTQAATQAEDWIQAWAQQLKEPIPPGDLRDKLKPLLKHQAF
EAEVQAHEEVMTSVAKKGEALLXQSHPRAGEVSQRLQGLRKHWEDLSRAMALRGQELEDR
RNFLEFLQRVDLAEAWIQEKEVKMNVGDLGQDLEHCLQLRRQLCVFRGNSAGDTVGDACI
RSISDLSLQLKNRDPEEVKIICQRRSQLNNRWASFHGNLLRYQQQLKGALEIHVLSRELD
NVTKRIQEKEALIQALDCGKDLESVQRLLRKHEELEREVHPIQAQVESLEREVGRLCQRS
PEAAHGLRHRQQEVAESWWQLRSRAQKRREALDALHQAQKLQATLQELLVSAQRLRAQMD
TSXPVEARRMLEEHQECKAELDSWTDSISLARSTGQRLLTAGHPFSSDIRQVLAGLEQEL
SSLEGAWQEHQLQLQQALELQLFLSSVEKMERWLCSKEDSLASEGLWDPLAPMEPLLWKH
KMLERDLEVQAGKISALEATARGLHQGGHPEAQSALDRCQAMLLRKEALFRQAGTRRHRL
EELRQLQAFLQDSQEVAAWLREKNLVALEEGLLDTAMLPAQLQKQQNFQAELDVSMHQQQ
ELQQEGQRLLQGGHPASEAIQERLEELGALWGELQDNSQKKVAKLQKACEALHLRRSMEE
LENWLEPIEVELRAPTVGQALPGVGELLGTQRELEAAVDKKARQAEALLRQAQAFVREGH
CLAQDVEEQARRLLQRFKSLREPLQERRTALEARSLLLKFFRDADEEMAWVQEKLPLATA
QDYGQSLSAVRHLQEQHQNLESEMSSHEALTRVVLGTGHKLVQAGHFAAHEVAARVQQLE
KAMAHLRAEAARRRLLLQQAQEAQQFLTELLKAGSWLAERGHALDSEDMGHSAEATQALL
QRLEATKRDLEAFSPRIERLQQTAALLESRKNPESPKVLAQLQAVREAHAELLRRAEARG
HGLQEQLQLHQLERKTLLLDAXLTTKAATAESQDYGQDLEGVKVLEEKFDAFRKEVQSLG
QAKVYALRKLAGTLERGAPRRYPHIQAQRSCIEAAWERLDQAIKARTENLAAAHEVHSFQ
QAAAELQGRMQEKTALMKGEDGGHSLSSVRTLQQQHRCLERELEAMEKEVARVQTEACRL
GQLHPAAPGGLAKVQEAWATLQAKAQERGQWLAQAAQGHAFLRRCQELLAXAQERQELAS
SEELAEDLAGAEQLLGQHEELGQEIRECRLQAQDLRQEGQQLVDNSHFMSAEVTECLQEL
EGRLQELEEAWALRWQRCAESWGLQKLQQRLEQAEAWLACREGLLLKPDYGHSVSDVELL
LHRHQDLEKLLAAQEEKFAQMQKTEMEQELLLQPQELKPGRAGSSLTSFQWRPSGHQGLG
AQLAETRDPQDAKGTPTMEGSLEFKQHLLPGGRQPSSSSWDSCRGTLQGSSLSLFLDERM
AAEKVASIALLDLTGARCERLRGRHGRKHTFSLRLTSGAEILSAAPSEEQAESWWRALGS
TAAQSLSPELKAKPVSSLNECTTKDARPGCLLRSDP
NT seq
6407 nt
NT seq
+upstream
nt +downstream
nt
atgattggggcctggagccacatccatggctctgctccggacgcccctgggttaagagca
gcagcctctcaagccactctgtggcaggagctccaggtggaggtaaaagctcaccagggg
caggtgcaacgggtgctgagttctgggcagagcctagcagcctcagggcacccccaagcc
caacacatcgtggagcagtgccaggagctggaaggccactgggcagagctggagagggca
tgtgaagcgcgggcccagtgtctgcagcaggctgtcactttccagcagtactttctggat
gtgtcagagctggagggctgggtggaggagaagcggccgctggtgagcagtcgggactat
ggcagagacgaggcagccaccctcaggctcattaacaagcaccaggctctacaggaggaa
ctagccatttactggagctccatggaggagcttgaccagacggcccaaaccctcactggc
cccgaagtccctgagcagccgcgtgtggtgtgggagaggctccgggagcagctgcgggca
ctgcaggagttggcggccacacgggaccgggaactggaggggaccctgaggctgcacgag
ttcctgagggaggccgaggacctgcagggctggctggcaagccagaagcaggcagccaaa
ggaggggagagcctgggggaggaccccgagcacgccctgcacctctgcaccaagtttgca
aagtttcagcaccaagtggagatgggcagccagcgggtggccgcctgccggctgctggca
gagagcctgctagagcatgggcacagtgctggccccatggtccgtcagaggcagcaagat
ctgcaggccgcctggtcggagctgtgggagctgacccaggcccgaggccacgcgctccga
gacgccgagaccaccctcagagttcacagagatctcttggaagtcctcacccaggtccag
gagaaagccacaagcctccccaacaatgtggcacgggacctgcgtgggctggaggcccag
ctgagaagccaccaggggctggagcgagaactcgtgggcaccgagcggcagctgcaggaa
ctgctggagactgcaggcagggtgcagaagctgtgtctggggcctcaggcccatgcggtg
cagcagaggcagcaagctgtgacgcaggcgtgggcagtgctgcagcgacgcatggagcag
cgcagggcccagctggagcgggcacgcctcctggcccgcttccgcacggcggtgcgtgac
tacgcctcctgggcagcccgcatgcgccaggacctgcaggtggaggagagttcgcaagag
cctagcagcggcccgcagaagctcagtgcccaccagtggctccgggcggagctggaggcc
cgggagaagctgtggcagcaggccacccagctgggccagcaggcacttcttgctgcaggg
acacccaccaaggaggtccaggaagagcttcgagccctgcaggaccagcgggaccaggtg
tatcaggcctgggcacggaagcaagagaggctgcaggccgagcagcaggagcagctcttc
ctcagagagtgcggccgcctggaggagatcctcgtgccccaggaggtctccctgaaaacc
agtgccttggggagctcggtggaagaggtagagcagttgattggcaagcacgaggtcttc
ctgaaggttctgactgcccaggacaagaaggaggcagccctgcgtgagcggctgaagacg
ctccggcgcccccgggtgcgggaccggcttcccatcctgctgcagcgccgggtgagagtg
aaggagctggcggagagccggggacacgccctgcatgcctccctgctgatggccagcttc
acccaggccgcaacccaggctgaggactggatccaggcgtgggcccagcagctgaaggag
ccgatccctcctggggacctgagagataagctgaagcccctgctgaaacaccaggccttt
gaggctgaagtccaggcccatgaggaggtcatgacctctgttgccaagaagggagaggct
ctcctggcagagtcaccctcgagccggagaggtctcccagcggctgcagggcctgcggaa
gcactgggaagacctgagccgggcaatggccctcaggggccaggagctggaggacaggcg
gaacttcctggagttcctgcagagagtggaccttgcagaggcctggatccaggagaagga
ggtgaagatgaatgttggtgacctgggccaggacctggagcactgcctgcagctccgacg
gcagctctgcgtgttccgaggaaactcagccggggacacagtgggtgatgcctgcatcag
gagcatcagtgacttgtcactgcagctcaagaaccgggaccctgaggaagtcaagatcat
ctgtcagcggcgaagccagctcaacaacaggtgggcgagtttccatggcaacctgctccg
gtaccagcagcagctcaaaggggccttggagatacacgtgttgtcccgagagctggacaa
tgtcaccaagaggattcaggagaaggaagccctgatccaggccctggactgtgggaaaga
tctggagagcgtgcagaggctgctgcggaaacacgaggagctggagcgggaagtgcaccc
catccaggcccaggtggagtccctagagcgtgaagtgggccgcctctgccaaagaagccc
tgaggcagcccacggcctcaggcacaggcagcaggaggtggctgagagctggtggcagct
ccggagcagggcccagaagcggagggaggcgctggatgccttgcaccaagctcagaaact
ccaggcaacgctgcaggaattgctggtcagcgcccagaggctgcgggctcagatggacac
gagcccctgtggaagcccggcgtatgttagaagagcatcaggagtgcaaggccgagctgg
actcctggacagacagcatcagcctggcccgaagcactgggcagcgactgctcacagcgg
ggcaccccttcagctctgacattcgccaggtgctggctggcttagaacaggagctgagca
gcctggaaggggcctggcaggagcatcagctacagctgcagcaggccctggagctacagc
tgtttctgagctcagtggagaagatggaacgttggctttgcagcaaggaagactccctag
ccagtgagggtctatgggaccccttggcccccatggagccccttctgtggaagcacaaga
tgctggagcgggacctggaggtgcaggcgggaaagatcagtgctctggaggccacggccc
gtggcctgcaccagggtgggcaccccgaggcccagagtgccctggacaggtgccaggcca
tgcttctgaggaaggaggcgctcttcaggcaagccgggacccgccgccatcgcctggagg
agctccggcagctgcaggccttcctgcaggactcccaggaggtggctgcgtggctgaggg
agaagaacctggtggccctggaggagggtttgctggacacagccatgctgccagcacagt
tacagaagcagcagaatttccaggcggagctggacgtgagcatgcaccaacagcaggagc
tgcagcaggagggacagaggctgctgcaggggggccacccagcctcggaggccatccagg
agcgactggaggagctgggagcactctggggtgagctgcaagacaactcccagaagaagg
tggccaagctccagaaggcctgtgaggccctgcatctgcggcggagcatggaggaactgg
agaactggctggagcccatcgaagttgagctgagagcccccactgtgggccaggccctgc
ctggggtgggcgaactcctgggcacacagagggagctggaggcagcagtggacaagaagg
ccaggcaggctgaggcactgctgcgccaggcccaggcctttgtgagggaaggccactgcc
ttgcccaagatgtggaagagcaggccaggcggctgcttcagaggttcaagagcctgaggg
agcccctgcaggagcgcaggacggccctggaggcccggagcctcctcttgaagttcttca
gggacgccgacgaggaaatggcctgggtgcaggagaagctgcctctggccactgcccagg
actatggccagagcctgagtgcggtgcggcacctgcaggagcagcaccagaacctggaga
gtgagatgagcagccacgaggctctgacccgggtggtgctgggcactgggcacaagctgg
tgcaggctgggcactttgccgcccacgaggtggccgcccgggtgcagcagctggagaagg
ccatggcccacctgcgggcagaggcggcgcggaggcggcttctgctgcagcaggctcagg
aggcccagcagtttctgactgagctcctgaaggcgggatcctggctggctgagcggggcc
atgccctggacagcgaggacatgggccacagtgctgaagccacacaggcccttctgcagc
ggctggaggccaccaagagagacctggaagcgttcagcccacgcatcgagcggctgcagc
agacagcagcactcctggagagcaggaagaacccagaaagccccaaggtgctagcccagc
tgcaggcagttcgggaggcccacgcagagctgctgcggagggcggaggccagggggcatg
gcctgcaggagcagctgcagctacaccagctggagcgaaagaccctgctcctcgacgcct
gactgaccaccaaggcggccaccgccgagtcccaggactacgggcaggacctggagggtg
tcaaggtgctggaagagaagtttgatgctttcagaaaggaagttcagagcctgggccagg
ccaaggtgtatgccctgaggaagttggcaggcaccctggagcggggtgcacccaggcgct
atccccacatccaagcccagaggagctgcattgaggccgcttgggagaggttggaccaag
caataaaagcccgcacagagaacttggctgcagcccatgaggtccacagctttcagcagg
cagcggctgagctccagggaaggatgcaggagaagacagccctgatgaagggagaggacg
gaggccacagcctgtcatctgtgcggaccctgcagcaacagcacaggtgcctggagagag
agctggaagctatggagaaggaggtggcacgggtacagacggaggcctgccgactgggcc
agctacatcctgcagctccggggggcctggccaaggtgcaggaggcctgggccaccctgc
aggcgaaggcccaggagcgaggccagtggctggcgcaggctgcacagggccatgccttcc
tcaggcgctgccaggaactgctagcatgagcacaggagaggcaggagctggcgtcctctg
aggagctggctgaggacttggcgggggctgagcagctccttgggcagcatgaagagctgg
ggcaagaaatcagggagtgccgccttcaagcccaggacctgcggcaggaaggacagcagc
tggtggacaacagccacttcatgtctgcggaggtgacagagtgcctgcaggagctggaag
ggcggctgcaggagctggaggaggcttgggccctgcgctggcaacgctgtgccgagagct
ggggcctgcagaagcttcagcagaggctggagcaggctgaggcctggctggcctgccggg
agggcctcctgctgaaacccgactatgggcactcagtgtcagatgtggagttgctgctgc
acagacaccaggacttagaaaagctgctggcagcccaggaagagaagtttgcccaaatgc
agaagacagagatggaacaggagctcctgctgcagccacaggagctgaagcccgggagag
ctggcagctcgctgacatcctttcagtggaggccctctggacaccaggggctaggagcac
agctggctgagacgagggacccccaggatgcaaagggtacccccaccatggaggggtctt
tggagttcaagcagcacctgctgcctggcgggaggcagcctagctcgagctcctgggaca
gctgccgcgggaccttgcagggcagctctctgagcctgttcctggatgagaggatggcag
cggagaaagtagcttccatagccctccttgacctcacgggagcccggtgtgagaggctgc
ggggccgccatggcaggaaacacacattctccttaaggctgaccagtggggcagagatcc
tgtctgcagcaccgtccgaagagcaggctgagagctggtggcgagccctgggcagcactg
cagcccagagtctgagcccggaactcaaagccaaacctgtcagctctctgaatgagtgca
cgaccaaggatgcccggcctggatgtctactcaggtctgatccctga
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integrated database retrieval system
