Pan troglodytes (chimpanzee): 129138706
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Entry
129138706 CDS
T01005
Name
(RefSeq) LOW QUALITY PROTEIN: spectrin beta chain, non-erythrocytic 5-like
KO
K06115
spectrin beta, non-erythrocytic 1/4/5
Organism
ptr
Pan troglodytes (chimpanzee)
Pathway
ptr04517
IgSF CAM signaling
ptr04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
ptr00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
129138706
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
129138706
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
ptr04812
]
129138706
Cytoskeleton proteins [BR:
ptr04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Cross-linking proteins
129138706
Intermediate filaments
Intermediate filament-binding proteins
129138706
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Spectrin
KIF21A_4th
Motif
Other DBs
NCBI-GeneID:
129138706
NCBI-ProteinID:
XP_063660314
LinkDB
All DBs
Position
X:complement(153857026..153878349)
Genome browser
AA seq
1983 aa
AA seq
DB search
MSNSSFQTGPSGWPDWPPGGWATHFWGTTDCQHRDRELEGTLRLHEFLREAEDLQGWLAS
QKQAAKGGESLGEDPEHALHLCTKFAKFQHQVEMGSQRVAACRLLAESLLEHGHSAGPMG
SAGGLAAEKLSPPQALVCEGSAVGRAAWSELWELTQARGHALRDAETTLRVHRDLLEVLT
QVQEKATSLPNNVARDLRGLEAQLRSHQGLERELVGTERQLQELLETAGRVQKLCPGPQA
HAVQQRQQAVTQAWAVLQRRMEQRRAQLERARLLARFRTAVRDYASWAARMRQDLQVEES
SQEPSSGPQKLSAHQWLRAELEAREKLWQQATQLGQQALLAAGTPTKEVQEELRALQDQR
DQVYQAWARKQERLQAEQQEQLFLRECGRLEEILVPQEVSLKTSALGSSVEEVEQLIRKH
EVFLKVLTAQDKKEAALHERLKTLRHPRVRDRLPILLQRRVRVKELAESRGHALHASLLM
ASFTQAATQAEDWIQAWAQQLKEPIPPGDLRDKLKPLLKHQAFEAEVQAHEEVMTCVAKK
GEALLXQSHPRAGEVSQRLQGLWKHWEDLRQAMALRGQELEDRRNFLEFLQRVDLAEAWI
QEKEVKMNVGDLGQDLEHCLQLRQQLCVFRGNSAGDTVGDACIRRISDLSLQLKNRDPEE
VKIICQRRSQLNNRWASFHGNLLWYQQQLEGALEIHVLSRELDNVTKRIQEKEALIQALD
CGKDLESVQRLLRKHEELEREVHPIQAQVESLEREVGRLCQRSPEAAHGLRHRQQEVAES
WWQLQSRAQKRREALDALHQAQKLQAMLQELLVSAQRLRAQMDTSPALRSPVEARRMLEE
HQECKAELDSWTDSISLAQSTGQRLLTAGHPFSSDIRQVLAGLEQELSSLEGAWQEHQLQ
LQQALELQLFLSSVEKMERWLCSKEDSLASEGLWDPLAPMEPLLWKHKMLERDLEEQAGK
ISALEATARGLHQGGHPEAQSALDRCPAMLLRKEALFRQAGTRRHRLEELRQLQAFLQDS
QKVAAWLREKNLVALEEGLLDTAMLPAQLQKQQNFQAELDASMHQQXELQREGQRLLXGG
HPASEAIQEQLEXLGALWGELQDNSQKKVAKLQKACEALRSMEELENWLEPIEVELRAPT
VGQALPGVGELLGTQRELEAAVDKKARQAEALLGQAQAFVREGHCLAQDVEEQARRLLQR
FKSLREPLRERRTALEARSLLLKFFRDADEEMAWVQEKLPLAAAQDYGQSLSAVRHLQEQ
HQNLESEISSHEALTRVXAGHFAAHEVAARVQQLEKAMAHLRAEAARRRLLLQQAQEAQQ
FLTELLEAGSWLAERGHVLDSEDMGHSAEATQALLRRLEATKRDLEAFSPRIERLQQTAA
LLESRKNPESPKVLAQLQAVQEAHAELLRRAEARGHGLQEQLQLHQLERETLLLDAXLTT
KAATAESQDYGQDLEGVKVLEEKFDAFRKEVQSLGQAKVYALRKLAGTLERGAPRRYPHI
QAQRSCIEAAWERLDQAIKARTENLAAAHEVHSFQQAAAELQGRMQEKTALMKGEDGGHS
LSSVRTLQQQHRRLERELEAMEKEVARVQTEACRLGQLHPAAPGGLAKVQEAWATLQAKA
QERGQWLVQAAQGHAFLGRCQELLAWAQERQELASSEELAEELAEDLAGAEQLLGQHEEL
GQEIRECRLQAQDLRQEGQQLVDNSHFMSAEVTECLQELEGRLQELEEAWVLRWQCCAES
WGLQKLLQRLEQAEAWLACREGLLLKPDYGHSVSDVELLLHRRQDLEKLLAAQEEKFAQM
QKTEMEQELLLQPQELKPGRAGSSLTSFQWRPSGHQGLGAQLAETRDSQDAKGTPTMEGS
LEFKQHLLPGGRQPSSSCWDSCRGTLQGSSLSLFLDERMAAEKVASIALLDLTGARCERL
RGRHGRKHTFSLRLTSGAEILSAAPSKEQAESWWRALGSTAGGLQGKDAGRAADSLGPKL
LGP
NT seq
5948 nt
NT seq
+upstream
nt +downstream
nt
atgagtaactccagttttcagactggcccctctggctggcccgactggcccccagggggg
tgggcaactcacttctggggaaccacggactgtcaacacagggaccgggaactggagggg
accctgaggctgcacgagttcctgagggaggccgaggacctgcagggctggctggcaagc
cagaagcaggcagccaaaggaggggagagcctgggggaggaccccgagcacgccctgcac
ctctgcaccaagtttgcaaagtttcagcaccaagtggagatgggcagccagcgggtggcc
gcctgccggctgctggcagagagcctgctagagcatgggcacagtgctggccccatgggc
tctgcagggggcctagctgcagagaagctgagcccgccacaggctctggtctgtgaaggg
agcgccgtgggcagggccgcctggtcggagctgtgggagctgacccaggcccgaggccac
gcgctccgagacgccgagaccaccctcagagttcacagagatctcttggaagtcctcacc
caggtccaggagaaagccacgagcctccccaacaatgtggcacgggacctgcgtgggctg
gaggcccagctgagaagccaccaggggctggagcgagaactcgtgggcaccgagcggcag
ctgcaggaactgctggagactgcaggcagggtgcagaagctgtgtccggggcctcaggcc
catgcggtgcagcagaggcagcaagctgtgacgcaggcgtgggcagtgctgcagcgacgc
atggagcagcgcagggcccagctggagcgggcacgcctcctggcccgcttccgcacggcg
gtgcgtgactacgcctcctgggcagcccgcatgcgccaggacctgcaggtggaggagagt
tcgcaagagcctagcagcggcccgcagaagctcagtgcccaccagtggctccgggcggag
ctggaggcccgggagaagctgtggcagcaggccacccagctgggccagcaggcacttctt
gctgcagggacacccaccaaggaggtccaggaagagcttcgagccctgcaggaccagcgg
gaccaggtgtatcaggcctgggcacggaagcaagagaggctgcaggccgagcagcaggag
cagctcttcctcagagagtgcggccgcctggaggagatcctcgtgccccaggaggtctcc
ctgaaaaccagtgccttggggagctcggtggaagaggtagagcagttgattcgcaagcac
gaggtcttcctgaaggttctgactgcccaggacaagaaggaggcagccctgcatgagcgg
ctgaagacgctccggcacccccgggtgcgggaccggcttcccatcctgctgcagcgccgg
gtgagagtgaaggagctggcggagagccggggacacgccctgcatgcctccctgctgatg
gccagcttcacccaggccgcaacccaggctgaggactggatccaggcgtgggcccagcag
ctgaaggagccgatccctcctggggacctgagagataagctgaagcccctgctgaaacac
caggcctttgaggctgaagtccaggcccatgaggaggtcatgacctgtgttgccaagaag
ggagaggctctcctggcagagtcaccctcgagccggagaggtctcccagcggctgcaggg
cctgtggaagcactgggaggacctgaggcaggcaatggccctcaggggccaggagctgga
ggacaggcggaacttcctggagttcctgcagagagtggaccttgcagaggcctggatcca
ggagaaggaggtgaagatgaatgttggtgacctgggccaggacctggagcactgcctgca
gctccgacagcagctctgcgtgttccgaggaaactcagccggggacacagtgggtgatgc
ctgcatcaggaggatcagtgacttgtcactgcagctcaagaaccgggaccctgaggaagt
caagatcatctgccagcggcgaagccagctcaacaacaggtgggcgagtttccatggcaa
cctgctctggtaccagcagcagctcgaaggggccttggagatacacgtgttgtcccgaga
gctggacaatgtcaccaagaggattcaggagaaggaagccctgatccaggccctggactg
tgggaaagatctggagagcgtgcagaggctgctgcggaaacacgaggagctggagcggga
agtgcaccccatccaggcccaggtggagtccctagagcgtgaagtgggccgcctctgcca
aagaagccctgaggcagcccatggcctcaggcacaggcagcaggaggtggctgagagctg
gtggcagctccagagcagggcccagaagcggagggaggcgctggatgccttgcaccaagc
tcagaaactccaggcaatgctgcaggaattgctggtcagcgcccagaggctgcgggctca
gatggacacgagccccgctcttcgcagccctgtggaagcccggcgtatgttagaagagca
tcaggagtgcaaggccgagctggactcctggacagacagcatcagcctggcccaaagcac
tgggcagcgactgctcacagcggggcaccccttcagctccgacattcgccaggtgctggc
tggcttagaacaggagctgagcagcctggaaggggcctggcaggagcatcagctacagct
gcagcaggccctggagctacagctgtttctgagctcagtggagaagatggaacgttggct
ttgcagcaaggaagactccctagccagtgagggtctatgggaccccttggcccccatgga
gccccttctgtggaagcacaagatgctggagcgggacctggaggagcaggcgggaaagat
cagtgctctggaggccacggcccgcggcctgcaccagggtgggcaccccgaggcccagag
tgccctggacaggtgcccggccatgcttctgaggaaggaggcgctcttcaggcaagccgg
gacccgccgccatcgcctggaggagctccggcagctgcaggccttcctgcaggactccca
gaaggtggctgcgtggctgagggagaagaacctggtggccttggaggagggtttgctgga
cacagccatgctgccagcacagttacagaagcagcagaatttccaggcggagctggacgc
gagcatgcaccaacagtaggagctgcagcgggagggacagaggctgctgcaggggggcac
ccagcctcggaggccatccaggagcaactggagtagctgggagcactctggggtgagctg
caagacaactcccagaagaaggtggccaagctccagaaggcctgtgaggccctgcggagc
atggaggaactggagaactggctggagcccatcgaggttgagctgagagcccccactgtg
ggccaggccctgcctggggtgggcgagctcctgggcacacagagggagctggaggcagca
gtggacaagaaggccaggcaggctgaggcactgctgggccaggcccaggcctttgtgagg
gaaggccactgccttgcccaagatgtggaagaacaggcccggcggctgcttcagaggttc
aagagcctgagggagcccctgcgggagcgcaggacggccctggaggcccggagcctcctc
ttgaagttcttcagggacgccgacgaggaaatggcctgggtgcaggagaagctgcctctg
gccgctgcccaggactatggccagagcctgagtgcggtgcggcacctgcaggagcagcac
cagaacctggagagtgagataagcagccacgaggctctgacccgggtggtgctgggcact
ttgccgcccacgaggtggccgcccgggtgcagcagctggagaaggccatggcccacctgc
gggcagaggcggcgcggaggcggcttctgctgcagcaggctcaggaggcccagcagtttc
tgactgagctcctggaggcgggatcctggctggctgagcggggccatgtcctggacagcg
aggacatgggccacagtgctgaagccacacaggcccttctgcggcggctggaggccacca
agagagacctggaagcgttcagcccacgcatcgagcggctgcagcagacagcagcactcc
tggagagcaggaagaacccagaaagccccaaggtgctagcccagctgcaggcagttcagg
aggcccacgcagagctgctgcggagggcggaggccagggggcacggcctgcaggagcagc
tgcagctacaccagctggagcgagagaccctgctcctcgacgcctgactgaccaccaagg
cggccaccgccgagtcccaggactacgggcaggacctggagggtgtcaaggtgctggaag
agaagtttgatgctttcagaaaggaagttcagagcctgggccaggccaaggtgtatgccc
tgaggaagttggcaggcaccctggagcggggtgcacccaggcgctatccccacatccaag
cccagaggagctgcattgaggccgcttgggagaggttggaccaagcaataaaagcccgca
cagagaacttggctgcagcccatgaggtccacagctttcagcaggcagcggctgagctcc
agggaaggatgcaggagaagacggccctgatgaagggagaggacggaggccacagcctgt
catctgtgcggaccctgcagcaacagcacaggcgcctggagagagagctggaagctatgg
agaaggaggtggcacgggtacagacggaggcctgccgactgggccagctacatcctgcag
ctccggggggcctggccaaggtgcaggaggcctgggccaccctgcaggcgaaggcccagg
agcgaggccagtggctggtgcaggctgcacagggccatgccttcctcgggcgctgccagg
aactgctagcatgggcacaggagaggcaggagctggcgtcctccgaggagctggctgagg
agctggctgaggacttggcgggggctgagcagctccttgggcagcatgaagagctggggc
aagaaatcagggagtgccgccttcaagcccaggacctgcggcaggaaggacagcagctgg
tggacaacagccacttcatgtctgcggaggtgacagagtgcctgcaggagctggaagggc
ggctgcaggagctggaggaggcttgggtcctgcgctggcaatgctgtgccgagagctggg
gcctgcagaagcttctgcagaggctggagcaggctgaggcctggctggcctgccgggagg
gcctcctgctgaaacccgactatgggcactcagtgtcagatgtggagttgctgctgcaca
gacgccaggacttagaaaagctgctggcagcccaggaagagaagtttgcccaaatgcaga
agacagagatggaacaggagctcctgctgcagccacaggagctgaagcccgggagagctg
gcagctcgctgacatcctttcagtggaggccctctggacaccaggggctaggagcacagc
tggctgagacgagggactcccaggatgcaaagggtacccccaccatggaggggtctttgg
agttcaagcagcacctgctgcctggcgggaggcagcctagctcgagctgctgggacagct
gccgcgggaccttgcagggcagctctctgagcctgttcctggatgagaggatggcagcgg
agaaagtagcttccatagccctccttgacctcacgggagcccggtgtgagaggctgcggg
gccgccatggcaggaaacacacattctccttaaggctgaccagtggggcagagatcctgt
ctgcagcaccgtccaaagagcaggctgagagctggtggcgagccctgggcagcactgcag
gtgggcttcaggggaaggatgcggggagggcggccgactccctgggccccaagctcctgg
gcccctag
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