Pan troglodytes (chimpanzee): 129143446
Help
Entry
129143446 CDS
T01005
Name
(RefSeq) LOW QUALITY PROTEIN: spectrin beta chain, non-erythrocytic 5-like
KO
K06115
spectrin beta, non-erythrocytic 1/4/5
Organism
ptr
Pan troglodytes (chimpanzee)
Pathway
ptr04517
IgSF CAM signaling
ptr04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
ptr00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
129143446
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
129143446
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
ptr04812
]
129143446
Cytoskeleton proteins [BR:
ptr04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Cross-linking proteins
129143446
Intermediate filaments
Intermediate filament-binding proteins
129143446
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Spectrin
PH
PH_9
Rv2175c_wHTH
Motif
Other DBs
NCBI-GeneID:
129143446
NCBI-ProteinID:
XP_063646387
LinkDB
All DBs
Position
13:14222485..14250490
Genome browser
AA seq
2338 aa
AA seq
DB search
MLVPHLFRAAHEPSGVCRNMLQTLKRHEAAESELLATRRHVEALQQVGRELLSRRPCGQE
DIQTRLQGLRSKWEALNRKMTEHGDELQQAGQQEQLLRQLQDAKEQLEQLEGALQSSETG
QDLRSSQRLQKWHQQLESESRTLAAKMAALASKAHGVAASPAILEETQKHLQRLELLQGH
LAIRGLQLQASVELHQFCHLINMELSWVTEQMPHGSPTSYTECLNGAQSLHCKHKELQVE
VKAHQGQVQRVLSSGQSLAASGHPQAQHIVEQCQELEGHWAELERACEARAQCLQQAVAF
QQYFLDVSELEGWVEEKQPLVSSRDYGRDEAATLRLINKHQALQEELAIYWSSMEELDQT
AQTLTGPEVPEQLRVVWERLREQLRALQELAATRDRELEGTLRLHEFLREAEDLQGWLAS
QKQAAKGGESLGEDPEHALHLCTKFAKFQHQVEMGSQRVAACRLLAESLLERGHSSGPMV
HQRQQDLQAAWSELWELTQARGHALRDAETTLRVHRDLLEVLTQVQEKATSLPNNVARDL
RGLEAQLRSHQGLERELVGTERQLQELLETAGRVQKLCPGPQAHAVQQRQQAVTQAWAVL
QXRMEQHRAQLERARLLARFRTAVRDYASWAARMRQDLQVEGSSQEPSSGPLKLSAHQWL
RAELEAREKLWQQATPLGQQALLAAGTPTKEVQEELRALQDQRDQVYQAWARKQERLQAE
QQEQLFLRECGRLEEILTAQEVSLKTSALGSSVEEVEQLICKHEVFLKVLTAQDKKEVAL
RERLKTLRRTWVQDRLPILQQRQVRVKXLAESRGHALHASLLMASFTQAATQAEDWIQAW
AQQLKESIPPGDPRDKLKPLLKHQAFEAEVQANEEVMTSVAKKGEALLXQSHPRAGELSQ
RLQGLRKHWEDLRQAMALRGQELEDRRNFLEFLQRVDLAEAWIQEKEVKMNVGDLGQDLE
HCLQLXRWLCEFRGNSAGDTVGDACIRSISDLSLQLKNRDPEEVKIICQRRSQLNNRWAS
FHGNLLRYQQQLEGALEIHVLSRELDNVTKRIQEKEALIQALDCGKDLESVQRLLRKHEE
LEREVHPIQAQVESLEREVGRLCQRSPEAAHGLRHRQQEVAESWWQVRSRAXKRREALDA
LHQAQKLQATLQELLVSAQRLRAQMDTNPTPRSPVEARCMLEEHQECKAELDSWTDSISL
ARSTGQRLLTAGHTFSSNIRQVLAGLEQELSSLEGAWQEHQLQLQQALELQLFLSSVEKM
ERWLCSKEDSLASEGLWDPLAPMEPLLWKHKMLERDLEVQAGKISALEATARGLHQDGHP
EAQSALDRCQAMLLRKEALFRQAGTRRHRLEELRQLQAFLQDSQEVAAWLREKNLVALEE
GLLDTAMLPAQLQKQQNFQAELDASMHQQQELQREGQRLLQGGHPASEAIQERLEELGAL
WGELQDNSQKVAKLQKACEALRLQWSMEELENWLEPIEVELRAPTVGQALPGVGELLGTQ
RELEAAVDKKARQAEALLGQAQAFVREGHCLAQDVEEQAWRLLQRFKSLREPLQERRTAL
EARSLLLKFFRDADEEMAWVQEKLPLAAAQDYGQSLSVVRHLQEQHQNLESEMSSHEALT
RVXAGHFAAHEVAARVQQLEKAMAHLRAEAAWRRLLLQQAQEAQQFLTELLEAGSWLAER
GHVLDSEDMGHSAEATQALLRRLEATKRDLEAFSPRIERLQQTAALLESRKNPESTKVLA
QLQAVQEAHAELLRRAEARGHGLQEQLQLHQLERETLLLDAXLTTKAATAESQDYGQDLE
GVKVLEEKFDAFRKEVQSLGQAKVYALRKLAGTLERGAPRRYPHIQAQRSCIEAAWERLD
QAIKACTENLAAAHEVHSFQQAAAELQGRMQEKTALMKGEDGGHSLSSVRTLQQQHRHLE
RELEAMEKEVARVQTEACRLGQLHPAAPGGLAKVQEAWATLQAKAQERGQWLAQAAQGHA
FLGRCQELLXVAWAQERQELASSEELAEDVAGAEQLLGQHEELGQEIRECRLQAQDLRQE
GQQLVDNSHFMSAEVTECLQELEGRLQELEEAWALRWQRCAESWGLQKLRQRLEQAEAWL
ACREGLLLKPDYGHSVSDVELLLHRHQDLEKLLAAQEEKFAQMQKTEMEQELLLQPQKLK
PGRAGSSLTSFQWRPSGHQGLGAQLAETRDPQDAKGTPTMEGSLEFKQHLLPGGRQPSSS
SWDSCRGTLQGSSLSLFLDERMAAEKVASIALLDLTGARCERLRGRHGRKHTFSLRLTSG
AEILFAAPSEEQAESWWRALGSTAARSLSPELKAKPVSSLNECTTKDARPGCLLRSDP
NT seq
7015 nt
NT seq
+upstream
nt +downstream
nt
atgttggtaccccatttatttagggctgcgcatgagccctccggagtgtgcagaaacatg
ctgcagacactcaagcgacacgaagcagctgagagcgagctactcgccacccgcagacac
gtggaggccctgcagcaggttgggagagagctgttgagtaggaggccctgtggccaggag
gacatacagaccaggcttcaaggcctgagaagcaaatgggaagctttgaaccgcaagatg
actgagcatggggacgagctccagcaggctggacagcaggagcaactcctgaggcagctg
caggatgcaaaggagcagctggagcagctcgaaggggccctacagagctcggaaacaggg
caggacctgcgctccagccagaggctgcagaaatggcaccaacagctggagagtgagagc
cggaccctggctgccaagatggctgccctcgcctccaaggcccatggcgtggccgcctcc
ccggccatcctggaagagacccagaagcacctccagaggctggagcttctgcaggggcat
ctggccatccggggcctgcagctgcaggcctcagtggagctgcaccagttctgccacctg
atcaacatggagctctcttgggtaactgagcagatgccccatggcagccccaccagctat
accgagtgcttgaatggtgcccagagccttcactgcaagcacaaggagctccaggtggag
gtaaaagctcaccaggggcaggtgcaacgggtgctgagttctgggcagagcctggcagcc
tcagggcacccccaagcccaacacatcgtggagcagtgccaggagctggaaggccactgg
gcagagctggagagggcatgtgaagcacgggcccagtgtctgcagcaggctgtcgctttc
cagcagtactttctggatgtgtcagagctggagggctgggtggaggagaagcagccgctg
gtgagcagtcgggactatggcagagacgaggcagccaccctcaggctcattaacaagcac
caggctctacaggaggaactagccatttactggagctccatggaggagcttgaccagaca
gcccaaaccctcactggccccgaagtccctgagcagctgcgtgtggtgtgggagaggctc
cgggagcagctgcgggcactgcaggagttggcggccacacgggaccgggaactggagggg
accctgaggctgcacgagttcctgagggaggccgaggacctgcagggctggctggcaagc
cagaagcaggcagccaaaggaggggagagcctgggggaggaccccgagcacgccctgcac
ctctgcaccaagtttgcaaagtttcagcaccaagtggagatgggcagccagcgggtggcc
gcttgccggctgctggcagagagcctgctagagcgtgggcacagttctggccccatggtc
catcagaggcagcaggatctgcaggctgcctggtcggagctgtgggagctgacccaggcc
cgaggccacgcgctccgagacgccgagaccaccctcagagttcacagagatctcttggaa
gtcctcacccaggtccaggagaaagccacgagcctccccaacaatgtggcacgggacctg
cgtgggctggaggcccagctgagaagccaccaggggctggagcgagaactcgtgggcacc
gagcggcagctgcaggaactgctggagactgcaggcagggtgcagaagctgtgtccgggg
cctcaggcccatgcggtgcagcagaggcagcaagctgtgacgcaggcgtgggcagtgctg
cagtgacgcatggagcagcatagggcccagctggagcgggcacgcctcctggcccgcttc
cgcacggcggtgcgtgactacgcctcctgggcagcccgcatgcgccaggacctgcaggtg
gaggggagttcgcaagagcctagcagcggcccgctgaagctcagtgcccaccagtggctc
cgggcggagctggaggcccgggagaagctgtggcagcaggccaccccgctgggccagcag
gcacttcttgctgcagggacacccaccaaggaggtccaggaagagcttcgagccctgcag
gaccagcgggaccaggtgtatcaggcctgggcacggaagcaagagaggctgcaggccgag
cagcaggagcagctcttcctcagagagtgcggccgcctggaggagatcctcacggcccag
gaggtctccctgaaaaccagtgccttggggagctcggtggaagaggtagagcagttgatt
tgcaagcacgaggtcttcctgaaggttctgactgcccaggacaagaaggaggtagccctg
cgtgagcggctgaagacgctccggcgcacctgggtgcaggaccggcttcccatcctgcag
cagcgccaggtgagagtgaagtagctggcggagagccggggacacgccctgcatgcctcc
ctgctgatggccagcttcacccaggccgcaacccaggctgaggactggatccaggcgtgg
gcccagcagctgaaggagtcgatccctcctggggacccgagagataagctgaagcccctg
ctgaaacaccaggcctttgaggctgaagtccaggccaatgaggaggtcatgacctctgtt
gccaagaagggagaggctctcctggcagagtcaccctcgagccggagagctctcccagcg
gctgcagggcctgcggaagcactgggaggacctgaggcaggcaatggccctcaggggcca
ggagctggaggacaggcggaacttcctggagttcctgcagagagtggaccttgcagaggc
ctggatccaggagaaggaggtgaagatgaatgttggtgacctgggccaggacctggagca
ctgcctgcagctctgacggtggctctgcgagttccgaggaaactcggccggggacacagt
gggtgatgcctgcatcaggagcatcagtgacttgtcactgcagctcaagaaccgggaccc
tgaggaagtcaagatcatctgccagcggcgaagccagctcaacaacaggtgggcgagttt
ccatggcaacctgctccggtaccagcagcagctcgaaggggccttggagatacacgtgtt
gtcccgagagctggacaatgtcaccaagaggattcaggagaaggaagccctgatccaggc
cctggactgtgggaaagatctggagagcgtgcagaggctgctgcggaaacacgaggagct
ggagcgggaagtgcaccccatccaggcccaggtggagtccctagagcgtgaagtgggccg
cctctgccaaagaagccctgaggcagcccacggcctcaggcacaggcagcaggaggtggc
tgagagctggtggcaggtccggagcagggcctagaagcggagggaggcgctggatgcctt
gcaccaagctcagaaactccaggcaacgctgcaggaattgctggtcagtgcccagaggct
gcgggctcagatggacacgaaccccactcctcgcagccctgtagaagcccggtgtatgtt
agaagagcatcaggagtgcaaggccgagctggactcctggacagacagcatcagcctggc
ccgaagcactgggcagcgactgctcacagcagggcacaccttcagctccaacattcgcca
ggtgctggctggcttagaacaggagctgagcagcctggaaggggcctggcaggagcatca
gctacagctgcagcaggccctggagctacagctgtttctgagctcagtggagaagatgga
acgttggctttgcagcaaggaagactccctagccagtgagggtctatgggaccccttggc
ccccatggagccccttctgtggaagcacaagatgctggagcgggacctggaggtgcaggc
gggaaagatcagtgctctagaggccacggcccgcggcctgcaccaggatgggcaccccga
ggcccagagtgccctggacaggtgccaggccatgcttctgaggaaggaggcgctcttcag
gcaagccgggacccgccgccatcgcctggaggagctccggcagctgcaggccttcctgca
ggactcccaggaggtggctgcgtggctgagggagaagaacctggtggccttggaggaggg
tttgctggacacagccatgctgccagcacagttacagaagcagcagaatttccaggcgga
gctggacgcgagcatgcaccaacagcaggagctgcagcgggagggacagaggctgctgca
ggggggccacccagcctcggaggccatccaggagcgactggaggagctgggagcactctg
gggtgagctgcaagacaactcccagaaggtggccaagctccagaaggcctgtgaggccct
gcgtctgcagtggagcatggaggaactggagaactggctggagcccatcgaggttgagct
gagagcccccactgtgggccaggccctgcctggggtgggcgagctcctgggcacacagag
ggagctggaggcagcagtggacaagaaggccaggcaggctgaggcactgctgggccaggc
ccaggcctttgtgagggaaggccactgccttgcccaagatgtagaagagcaggcctggcg
gctgcttcagaggttcaagagcctgagggagcccctgcaggagcgcaggacggccctgga
ggcccggagcctcctcttgaagttcttcagggatgccgacgaggaaatggcctgggtgca
ggagaagctgcctctggccgctgcccaggactatggccagagcctgagtgtggtgcggca
cctgcaggagcagcaccagaacctggagagtgagatgagcagccacgaggctctgacccg
ggtggtgctgggcactttgctgcccacgaggtggccgcccgggtgcagcagctggagaag
gccatggcccacctgcgggcagaggcggcgtggaggcggcttctgctgcagcaggctcag
gaggcccagcagtttctgactgagctcctggaggcgggatcctggctggctgagcggggc
catgtcctggacagcgaggacatgggccacagtgctgaagccacacaggcccttctgcgg
cggctggaggccaccaagagagacctggaagcgttcagcccacgcatcgagcggctgcag
cagacagcagcactcctggagagcaggaagaacccagaaagcaccaaggtgctagcccag
ctgcaggcagttcaggaggcccacgcagagctgctgcggagggcggaggccagggggcac
gggctgcaggagcagctgcagctacaccagctggagcgagagaccctgctcctcgacgcc
tgactgaccaccaaggcggccaccgccgagtcccaggactacgggcaggacctggagggt
gtcaaggtgctggaagagaagtttgatgctttcagaaaggaagtgcagagcctgggccag
gccaaggtgtatgccctgaggaagttggcaggcaccctggagcggggtgcacccaggcgc
tatccccacatccaagcccagaggagctgcattgaggccgcttgggagaggttggaccaa
gcaataaaagcctgcacagagaacttggctgcagcccatgaggtccacagctttcagcag
gcagcggctgagctccagggaaggatgcaggagaagacggccctgatgaagggagaggac
ggaggccacagcctgtcatctgtgcggaccctgcagcaacagcacaggcacctggaaaga
gagctggaagctatggagaaggaggtggcacgggtacagacggaggcctgccgactgggc
cagctacatcctgcagctccggggggcctggccaaggtacaggaggcctgggccaccctg
caggcgaaggcccaggagcgaggccagtggctggcgcaggctgcacagggccatgccttc
ctcgggcgctgccaggaactgctataggtagcatgggcacaggagaggcaggagctggcg
tcctccgaggagctggctgaggacgtggcgggggctgagcagctccttgggcagcatgaa
gagctggggcaagaaatcagggagtgccgccttcaagcccaggacctgcggcaggaagga
caacagctggtggacaacagccacttcatgtctgcggaggtgacagagtgcctgcaggag
ctggaagggcggctgcaggagctggaggaggcttgggccctgcgctggcaacgctgtgcc
gagagctggggcctgcagaagcttcggcagaggctggagcaggctgaggcctggctggcc
tgccgggaggggcctcctgctgaagcccgactatgggcactcagtgtcagatgtggagtt
gctgctgcacagacaccaggacttagaaaagctgctggcagcccaggaagagaagtttgc
ccaaatgcagaagacagagatggaacaggagctcctgctgcagccacagaagctgaagcc
cgggagagctggcagctcactgacatcctttcagtggaggccctctggacaccaggggct
aggagcacagctggctgagacgagggacccccaggatgcaaagggtacccccaccatgga
ggggtctttggagttcaagcagcacctgctgcctggcgggaggcagcctagctcgagctc
ctgggacagctgccgcgggaccttgcagggcagctctctgagcctgttcctggatgagag
gatggcagcggagaaagtagcttccatagccctccttgacctcacgggagcccggtgtga
gaggctgcggggccgccatggcaggaaacacacattctccttaaggttgaccagtggggc
agagatcctgtttgcagcaccgtccgaagagcaggctgagagctggtggcgagccctggg
cagcactgcagcccggagtctgagcccagaactcaaagccaaacctgtcagctctctgaa
tgagtgcacgaccaaggatgcccggcctggatgtctactcaggtctgatccctga
DBGET
integrated database retrieval system
