Pan troglodytes (chimpanzee): 129144073
Help
Entry
129144073 CDS
T01005
Name
(RefSeq) LOW QUALITY PROTEIN: spectrin beta chain, non-erythrocytic 5-like
KO
K06115
spectrin beta, non-erythrocytic 1/4/5
Organism
ptr
Pan troglodytes (chimpanzee)
Pathway
ptr04517
IgSF CAM signaling
ptr04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
ptr00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
129144073
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
129144073
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
ptr04812
]
129144073
Cytoskeleton proteins [BR:
ptr04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Cross-linking proteins
129144073
Intermediate filaments
Intermediate filament-binding proteins
129144073
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Spectrin
PH
PH_9
Motif
Other DBs
NCBI-GeneID:
129144073
NCBI-ProteinID:
XP_054540928
LinkDB
All DBs
Position
4:153757..178471
Genome browser
AA seq
2161 aa
AA seq
DB search
MIGSWSHIHGSAPDTPGLRAAASQATLWQELQVEVKAHQGQVQRVLSSGRSLAASGHPQA
QHIVEQCQELEGHWAELERACEARAQCLQQAVTFQQYFLDVSELEGWVEEKRPLVSSRDY
GRDEAATLRLINKHQALQEELAIYWSSMEELDQTAQTLTGPEVPEQPRVVWERLREQLRA
LQELAATRDRELEGTLRLHEFLREAEDLQGWLASQKQAAKGGESLGEDPEHALHLCTKFA
KFQHQVEMGSQRVATCRLLAESLLERGHSAGPMVRQRQXDLQAAWSELWELIQARGHALR
DAETTLRVHRDLLEVLTQVQEKATSLPNNVARDLRGLEAQLRSHQGLERELVGTERQLQE
LLETAGRVQKLCLGPQAHAVQQRQQAVTQAWAVLQRRMEQRRAQLERARLLARFCTAVRD
YASWAARMRQDLQVEESSQEPSSGPLKLSAHQWLRAELEAREKLWQQATQLGQQALLAAG
TPTKEVQEELRALQDQRDQVYQAWARKQERLQAEQQEQLFLRECGHLEEILVPQEVSLKT
SASGSSVEEVEQLIRKHEVFLKVLTAQDKKEAALRERLKTLRRPRVRDRLPILLQRRVRV
KELAESRGHALHASLLMASFTQAATQAEDWIQAWAQQLKEPIPPGDLRDKLKPLLKHQAF
EAEVQAHEEVMTSVAKKGEALLAQGHPRAGEVSQRLQGLRKHWEDLRQAMALRGQELEDR
RNFLEFLQRVDLAEAWIQEKEMKMNVGDLGQDLEHCLQLRRRLCEFRGNSARDTVGDACI
RSISDLSLQLKNRDPEEVKIICQRXSQLNNRWASFHGNLLRYHQQLEGALEIHVLSQELD
NVTKRIQEKEALIQALDCGKDLESVQRLLRKHEELEREVHPIQAQVESLEREVGHLCQRS
PEAARGLRHRQQEVAESWWQLRSRAQKRREALDALHQAQKLQATLQELLVSAQRLRAQMD
TSPAPRSPVEARRMLEEHQECKAELDSWTDSISLAGSTGQRLLTAGRPFSSDIRQVLAGL
EQELSSLEGAWQEHQLQLQQALELQLFLSSVEKMERWLCSKEDSLASEGLWDPLAPMEPL
LWKHKMLERDLEVQAGKISALEATAHGLHQGGHPEAQSALGRCQAMLLRKEALFRQARTR
RHRLEELRQLQAFLQDSQEVAAWLREKNLVALEEGLLDTAMLPAQLQKQQNFQAELDASM
HQQQELQREGQRLLQGGHPASEAIQERLEXLGALWGELQDNFQKVAKLQKACEALRLRRS
MEELENWLEPIEVELRAPTVGQALPGVGELLGTQRELEAAVDKKARQAEALLGQAQAFVR
EGHCLAQDVEEQAQRLLQRFKSLREPLQERRTALEARSLLLKFFRDADEEMAWVQEKLPL
ATAQDYGQSLSAVRHLQEQHQNLESEMSSHEALTQVVLGTGHKLVQAGHFAAHEVAARVQ
QLEKAMAHLRAEAAQRRLLLQQAQEAQQFLTELLEAGSWLAERGHVLDSEDMGHSAEATQ
ALLRRLEATKRDLEAFSPRIERLQQTAALLESRKNPESPKVLAQLQAVREAHAELLRRAE
ARGHGLQEQLQLHQLERETLLLDAWLTTKAATAESQDYGQDLEGVKVLEEKFDAFRKEVQ
SLGQAKVYALRKLAGTLERGAPRRYPHIQAQRSRIEAAWERLDQAIKARTENLAAAHEVH
SFQQAAAELQGRMQEKTALMKGEDGGHSLSSVRTLQQQHRRLERELEAMEKEVARVQTEA
CRLGQLHPAAPGGLAKVQEAWATLQVKAQERGQWLAQAAQGHAFLGRCQELLAWAQERQE
LASSEELAEDVAGAEQLLGQHEELGQEIRECRLQAQDLRQEGQQLVDNSHFMSAEVTECL
QELEGRLQELEEAWALRWQCCAESWGLQKLRQRLEQAEAWLACREGLLLKPDYGHSVSDV
ELLLHRHQDLEKLLAAQEEKFAQMQKTEMEQELLLQPQELKPGRAGSSLTSFQWRPSGHQ
GLGAQLAETRDPQDAKGTPTMEGSLEFKQHLLPGGRQPSSSSWDSCRGTLQGSSLSLFLD
ERMAAEKVASIALLDLTGARCERLRGRHGRKHIFSLRLTSGAEILFAAPSEEQAESWWRA
LGSTAAQSLSPELKAKPVSSLNECTTKDARPGCLLRWDTWVGEAGRGALGFSGWQALSSE
A
NT seq
6486 nt
NT seq
+upstream
nt +downstream
nt
atgattgggtcctggagccacatccatggctctgctccggacacccctgggttaagagca
gcagcctctcaagccactctgtggcaggagctccaggtggaggtaaaagctcaccagggg
caggtgcaacgggtgctgagttctgggcggagcctagcagcctcagggcacccccaagcc
caacacatcgtggagcagtgccaggagctggaaggccactgggcagagctggagagggca
tgtgaagcgcgggcccagtgtctgcagcaggctgtcactttccagcagtactttctggat
gtgtcagagctggagggctgggtggaggagaagcggccgctggtgagcagtcgggactat
ggcagagacgaggcagccaccctcaggctcattaacaagcaccaggctctacaggaggaa
ctagccatttactggagctccatggaggagcttgaccagacggcccaaaccctcactggc
cccgaagtccctgagcagccgcgtgtggtatgggagaggctccgggagcagctgcgggca
ctgcaggagttggcggccacacgggaccgggaactggaggggaccctgaggctgcacgag
ttcctgagggaggccgaggacctgcagggctggctggcaagccagaagcaggcagccaaa
ggaggggagagcctgggggaggaccccgagcacgccctgcacctctgcaccaagtttgca
aagtttcagcaccaagtggagatgggcagccagcgggtggccacctgccggctgctggca
gagagcctgctagagcgtgggcacagtgctggccccatggtccgtcagaggcagtaggat
ctgcaggccgcctggtcggagctgtgggagctgatccaggcccgaggccacgcgctccga
gacgccgagaccaccctcagagttcacagagatctcttggaagtcctcacccaggtccag
gagaaagccacgagcctccccaacaatgtggcacgggacctgcgtgggctggaggcccag
ctgagaagccaccaggggctggagcgagaactcgtgggcaccgagcggcagctgcaggaa
ctgctggagactgcaggcagggtgcagaagctgtgtctggggcctcaggcccatgcggtg
cagcagaggcagcaagctgtgacgcaggcgtgggcagtgctgcagcgacgcatggagcag
cgcagggcccagctggagcgggcacgcctcctggcccgcttctgcacggcggtgcgtgac
tacgcctcctgggcagcccgcatgcgccaggacctgcaggtggaggagagttcgcaagag
cctagcagcggcccgctgaagctcagtgcccaccagtggctccgggcggagctggaggcc
cgggagaagctgtggcagcaggccacccagctgggccagcaggcacttcttgctgcaggg
acacccaccaaggaggtccaggaagagcttcgagccctgcaggaccagcgggaccaggtg
tatcaggcctgggcacggaagcaagagaggctgcaggccgagcagcaggagcagctcttc
ctcagagagtgcggccacctggaggagatcctcgtgccccaggaggtctccctgaaaacc
agtgcctcggggagctcggtggaagaggtagagcagttgattcgcaagcacgaggtcttc
ctgaaggttctgactgcccaggacaagaaggaggcagccctgcgtgagcggctgaagacg
ctccggcgcccccgggtgcgggaccggcttcccatcctgctgcagcgccgggtgagagtg
aaggagctggcggagagccggggacacgccctgcatgcctccctgctgatggccagcttc
acccaggccgcaacccaggctgaggactggatccaggcgtgggcccagcagctgaaggag
ccgatccctcctggggacctgagagataagctgaagcccctgctgaaacaccaggccttt
gaggctgaagtccaggcccatgaggaggtcatgacctctgttgccaagaagggagaggct
ctcctggcacagggtcaccctcgagccggagaggtctcccagcggctgcagggcctgcgg
aagcactgggaggacctgaggcaggcaatggccctcaggggccaggagctggaggacagg
cggaacttcctggagttcctgcagagagtggaccttgcagaggcctggatccaggagaag
gagatgaagatgaatgttggtgacctgggccaggacctggagcactgcctgcagctccga
cggcggctctgcgagttccgaggaaactcggccagggacacagtgggtgatgcctgcatc
aggagcatcagtgacttgtcactgcagctcaagaaccgggaccctgaggaagtcaagatc
atctgccagcggtgaagccagctcaacaacaggtgggcgagtttccatggcaacctgctc
cggtaccaccagcagctcgaaggggccttggagatacacgtgttgtcccaagagctggac
aatgtcaccaagaggattcaggagaaggaagccctgatccaggccctggactgtgggaaa
gatctggagagcgtgcagaggctgctgcggaaacacgaggagctggagcgggaagtgcac
cccatccaggcccaggtggagtccctagagcgtgaagtgggccacctctgccaaagaagc
cctgaggcagcccgcggcctcaggcacaggcagcaggaggtggctgagagctggtggcag
ctccggagcagggcccagaagcggagggaggcgctggatgccttgcaccaagctcagaaa
ctccaggcaacgctgcaggaattgctggtcagcgcccagaggctgcgggctcagatggac
acgagccccgctcctcgcagccctgtggaagcccggcgtatgttagaagagcatcaggag
tgcaaggccgagctggactcctggacagacagcatcagcctggccggaagcactgggcag
cgactgctcacagcggggcgccccttcagctctgacattcgccaggtactggctggctta
gaacaggagctgagcagcctggaaggggcctggcaggagcatcagctacagctgcagcag
gccctggagctacagctgtttctgagctcagtggagaagatggaacgttggctttgcagc
aaggaagactccctagccagtgagggtctatgggaccccttggcccccatggagcccctt
ctgtggaagcacaagatgctggagcgggacctggaggtgcaggcgggaaagatcagtgct
ctggaggccacggcccacggcctgcaccagggtgggcaccccgaggcccagagtgccctg
ggcaggtgccaggccatgcttctgaggaaggaggcgctcttcaggcaagccaggacccgc
cgccatcgcctggaggagctccggcagctgcaggccttcctgcaggactcccaggaggta
gctgcgtggctgagggagaagaacctggtggccctggaggagggtttgctggacacagcc
atgctgccagcacagttacagaagcagcagaatttccaggcggagctggacgcgagcatg
caccaacagcaggagctgcagcgggagggacagaggctgctgcaggggggccacccagcc
tcggaggccatccaggagagactggagtagctgggagcactctggggtgagctgcaagac
aacttccagaaggtggccaagctccagaaggcctgtgaggccctgcgtctgcggcggagc
atggaggaactggagaactggctggagcccatcgaggttgagctgagagcccccactgtg
ggccaggccctgcctggggtgggcgagctcctgggcacacagagggagctggaggcagca
gtggacaagaaggccaggcaggctgaggcactgctgggccaggcccaggcctttgtgagg
gaaggccactgccttgcccaagatgtggaagagcaggcccagcggcttcttcagaggttc
aagagcctgagggagcccctgcaggagcgcaggacggccctggaggcccggagcctcctc
ttgaagttcttcagggacgccgacgaggaaatggcctgggtgcaggagaagctgcctctg
gccactgcccaggactatggccagagcctgagtgcggtgcggcacctgcaggagcagcac
cagaacctggagagtgagatgagcagccacgaggctctgacccaggtggtgctgggcact
gggcacaagctggtgcaggctgggcactttgccgcccacgaggtggccgcccgggtgcag
cagctggagaaggccatggcccacctgcgggcagaggcggcgcagaggcggcttctgctg
cagcaggctcaggaggcccagcagtttctgactgagctcctggaggcgggatcctggctg
gctgagcggggccatgtcctggacagcgaggacatgggccacagtgctgaagccacacag
gcccttctgcggcggctggaggccaccaagagagacctggaagcgttcagcccacgcatc
gagcggctgcagcagacagcagcactcctggagagcaggaagaacccagaaagccccaag
gtgctagcccagctgcaggcagttcgggaggcccacgcagagctgctgcggagggcggag
gccagggggcacggcctgcaggagcagctgcagctacaccagctggagcgagagaccctg
ctcctcgatgcctggctgaccaccaaggcggccaccgccgagtcccaggactacgggcag
gacctggagggtgtcaaggtgctggaagagaagtttgatgctttcagaaaggaagtgcag
agcctgggccaggccaaggtgtatgccctgaggaagttggcaggcaccctggagcgcggt
gcacccaggcgctatccccacattcaagcccagaggagccgcattgaggccgcttgggag
aggttggaccaagcaataaaagcccgcacagagaacttggctgcagcccatgaggtccac
agctttcagcaggcagcggctgagctccagggaaggatgcaggagaagacggccctgatg
aagggagaggacggaggccacagcctgtcatctgtgcggaccctgcagcaacagcacagg
cgcctggagagagagctggaagctatggagaaggaggtggcacgggtacagacggaggcc
tgccgactgggccagctacatcctgcagctccggggggcctggccaaggtgcaggaggcc
tgggccaccctgcaggtgaaggcccaggagcgaggccagtggctggcgcaggctgcacag
ggccatgccttcctcgggcgctgccaggaactgctagcatgggcacaggagaggcaggag
ctggcgtcctccgaggagctggctgaggatgtggcgggggctgagcagctccttgggcag
catgaagagctggggcaagaaatcagggagtgccgccttcaagcccaggacctgcggcag
gaaggacagcagctggtggacaacagccacttcatgtctgcggaggtgacagagtgcctg
caggagctggaagggcggctgcaggagctggaggaggcttgggccctgcgctggcaatgc
tgtgccgagagctggggcctgcagaagcttcggcagaggctggagcaggctgaggcctgg
ctggcctgccgggagggcctcctgctgaaacccgactatgggcactcagtgtcagatgtg
gagttgctgctgcacagacaccaggacttagaaaagctgctggcagcccaggaagagaag
tttgcccaaatgcagaagacagagatggaacaggagctcctgctgcagccacaggagctg
aagcccgggagagctggcagctcgctgacatcctttcagtggaggccctctggacaccag
gggctaggagcacagctggctgagacgagggacccccaggatgcaaagggtacccccacc
atggaggggtctttggagttcaagcagcacctgctgcctggcgggaggcagcctagctcg
agctcctgggacagctgccgcgggaccttgcagggcagctctctgagcctgttcctggat
gagaggatggcagcggagaaagtagcttccatagccctccttgacctcacgggagcccgg
tgtgagaggctgcggggccgccatggcaggaaacacatattctccttaaggctgaccagt
ggggcagagatcctgtttgcagcaccgtccgaagagcaggctgagagctggtggcgagcc
ctgggcagcactgcagcccagagtctgagcccggaactcaaagccaaacctgtcagctct
ctgaatgagtgcacgaccaaggatgcccggcctggatgtctactcaggtgggacacctgg
gtgggggaagcagggcggggagccctgggcttcagtggctggcaggcgctgtcctctgaa
gcctga
DBGET
integrated database retrieval system
