Pan troglodytes (chimpanzee): 450489
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Entry
450489 CDS
T01005
Symbol
JMJD1C
Name
(RefSeq) probable JmjC domain-containing histone demethylation protein 2C isoform X9
KO
K11449
jumonji domain-containing protein 1C [EC:1.14.11.-]
Organism
ptr
Pan troglodytes (chimpanzee)
Pathway
ptr05202
Transcriptional misregulation in cancer
Brite
KEGG Orthology (KO) [BR:
ptr00001
]
09160 Human Diseases
09161 Cancer: overview
05202 Transcriptional misregulation in cancer
450489 (JMJD1C)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ptr03036
]
450489 (JMJD1C)
Chromosome and associated proteins [BR:
ptr03036
]
Eukaryotic type
Histone modification proteins
Histone demethylases
450489 (JMJD1C)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Tudor_KDM3B
JmjC
C1_2
zf-C5HC2
FYVE
Motif
Other DBs
NCBI-GeneID:
450489
NCBI-ProteinID:
XP_016773871
Ensembl:
ENSPTRG00000002540
VGNC:
4718
LinkDB
All DBs
Position
8:complement(75419765..75774061)
Genome browser
AA seq
2372 aa
AA seq
DB search
MPLSIKRESQSCLLYMGPYSLNGYRVRVYRQDSATQWFTGIITHHDLFTRTMIVMNDQVL
EPQNVDPSMVQMTFLDDVVHSLLKGENIGITSRRRSRANQNVNAVHSHYTRAQANSPRPA
MNSQAAVPKQNTHQQQQQRSIRPNKRKGSDSSIPDEEKMKEEKYDYISRGENPKGKNKHL
MNKRRKPEEDEKKLNMKRLRTDNVSDFSESSDSENSNKRIIDNSSEQKPENELKNKNTSK
INGEEGKPHNNEKAGEETLKDSQPPWDQIQEDKKHEEAEKRKSVDTQLQEDMIIHSSEQS
TVSDHNSNDLLPQECNMDKTHTMELLPKEKFVSRPPTPKCVIDITNDTNLEKVAQENSST
FGLQTLQKMDPNVSDSKHSIANAKFLETAKQDSDQSWVSDVVKVDLTQSGVTNASSGNDH
LNMEKEKYVSYISPLSAVSVMEDKLHKRSPPPETIKSKLNTSVDTHKIKSSPSPEVVKPK
ITHSPDSVKSKATYVNSQATGERRLANKIEHELSRCSFHPIPTRSSTLETTKSPLIIDKN
EHFTVYRDPALIGSETGANHISPFLSQHPFPLHSSSHRTCLNPGTHHPALTPAPHLLAGS
SSQTPLPTINTHPLTSGPHHAVHHPHLLPTVLPGVPTASLLGGHPRLESAHASSLSHLAL
AHQQQQQLLQHQSPHLLGQAHPSASYNQLGLYPIIWQYPNGTHAYSGLGLPSSKWVHPEN
AVNAEASLRRNSPSPWLHQPTPVTSADGIGLLSHIPVRPSSAEPHRPLKITAHSSPPLTK
TLVDHHKEELERKAFMEPLRSVASTSAKNDLDLNRSQTGKDCHLHRHFVDPVLNQLQRPP
QETGERLNKYKEEHRRILQESIDVAPFTTKIKGVEGERENYSRVASSSSSPKSHIIKQDM
DVERSVSDLYKMKHSVPQSLPQSNYFTTLSNSVVNEPPRSYPSKEVSNIYGDKQSNALAA
AAANPQTLTSFITSLSKPPPLIKHQPESEGLVGKIPEHLPHQIASHSVTTFRNDCRSPTH
LTVSSTNTLRSMPALHRAPVFHPPIHHSLERKEGSYSSLSPPTLTPVMPVNAGGKVQESQ
KPPTLIPEPKDSQANFKSSSEQSLTEMWRPNNNLSKEKTEWHVEKSSGKLQAAMASVIVR
PSSSTKTDSMPAMQLASKDRVSERSSAGAHKTDCLKLAEAGETGRIILPNVNSDSVHTKS
EKNFQAVSQGSVPSSVMSAVNTMCNTKTDVITSAADTTSVSSWGGSEVISSLSNTILAST
SSECVSSKSVSQPVAQKQECKVSTTAPVTLASSKTGSVVQPSSGFSGTTDFIHLKKHKAA
LAAAQYKSSNASETEPNAIKNQTLSASLPLDSTVICSTINKANSVGNGQASQTSQPNYHT
KLKKAWLTRHSEEDKNTNKMENSGNSVSEIIKPCSVNLIASTSSDIQNSVDSKIIVDKYV
KDDKVNRRKAKRTYESGSESGDSDESESKSEQRTKRQPKPTYKKKQNDLQKRKGEIEEDL
KPNGVLSRSAKERSKLKLQSNSNTGIPRSVLKDWRKVKKLKQTGESFLQDDSCCEIGPNL
QKCRECRLIRSKKGEEPAHSPVFCRFYYFRRLSFSKNGVVRIDGFSSPDQYDDEAMSLWT
HENFEDDELDIETSKYILDIIGDKFCQLVTSEKTALSWVKKDAKIAWKRAVRGVREMCDA
CEATLFNIHWVCQKCGFVVCLDCYKAKERKSSRDKELYAWMKCVKGQPHDHKHLMPTQII
PGSVLTDLLDAMHTLREKYGIKSHCHCTNKQNLQVGNFPTMNGVSQVLQNVLNHSNKISL
CMPESQQQNTPPKSEKNGGSSPESDVGTDNKLTPPESQSPLHWLADLAEQKAREEKKENK
ELTLENQIKEEREQDNSESPNGRTSPLVSQNNEQGSTLRDLLTTTAGKLRVGSTDAGIAF
APVYSMGAPSSKSGRTMPNILDDIIASVVENKIPPSKTSKINVKPELKEEPEESIISAVD
ENNKLYSDIPHSWICEKHILWLKDYKNSSNWKLFKECWKQGQPAVVSGVHKKMNISLWKA
ESISLDFGDHQADLLNCKDSIISNANVKEFWDGFEEVSKRQKNKSGETVVLKLKDWPSGE
DFKTMMPARYEDLLKSLPLPEYCNPEGKFNLASHLPGFFVRPDLGPRLCSAYGVVAAKDH
DIGTTNLHIEVSDVVNILVYVGIAKGNGILSKAGILKKFEEEDLDDILRKRLKDSSEIPG
ALWHIYAGKDVDKIREFLQKISKEQGLEVLPEHDPIRDQSWYVNKKLRQRLLEEYGVRTC
TLIQFLGDAIVLPAGALHQVQNFHSCIQVTEDFVSPEHLVESFHLTQELRLLKEEINYDD
KLQVKNILYHAVKEMVRALKIHEDEVEDMEEN
NT seq
7119 nt
NT seq
+upstream
nt +downstream
nt
atgccattaagtatcaagagagaatcccaaagctgtttgctttatatgggtccttattcc
ttaaatggatacagagtgagagtatatagacaagactctgccacccagtggtttactggc
ataattactcatcatgatctcttcacccgcaccatgatcgttatgaatgatcaggtacta
gaaccacagaatgtcgatccttctatggttcaaatgacctttctagatgatgttgttcac
tctttgttaaaaggtgaaaatattggcattacatcacgacgcaggtctcgtgccaatcaa
aacgtcaacgctgttcacagccattatacacgtgcccaagcaaatagtcccagaccagca
atgaactcccaagctgctgtaccaaaacagaatacacaccagcaacagcaacaaagaagt
atccgtccaaataagaggaagggctcagatagcagtataccagatgaagagaagatgaag
gaggaaaaatatgattatatatcacgaggagaaaatcctaaaggtaaaaacaaacacttg
atgaataaaagaaggaaacctgaggaggatgaaaagaaactaaatatgaaaagacttcga
actgacaatgtttcagacttttctgagagcagtgactcagaaaattcaaataagagaata
atagataattcctcagaacagaagccagagaatgaattgaaaaataaaaatacttcaaaa
ataaatggagaagaaggaaaaccccataataatgagaaggcaggagaagagaccctaaaa
gatagccagcctccctgggatcaaatacaggaagataaaaaacatgaagaagcagagaag
cggaagtctgttgacactcagcttcaagaagatatgattattcattcgtcagaacaatcc
acagtttctgatcataattctaatgatttacttcctcaggaatgcaatatggataaaaca
cataccatggaattgctaccaaaggagaagtttgtatccagaccacccacaccaaaatgt
gttattgatattacaaatgacactaatttagaaaaggtggctcaggaaaactcaagtacc
tttggccttcagacacttcagaaaatggatcctaatgttagtgattcaaaacactctatt
gcaaatgcaaaattcttggaaacagcaaaacaagattctgaccagagctgggtcagtgat
gtagttaaagtggatctaacccaatcaggtgttacaaatgcttcttcaggaaatgatcac
ttgaacatggaaaaagagaagtatgtctcttacatttctcctttaagtgcagtttctgtc
atggaagataagctgcataagcgaagtccacctccagagactataaaatctaaacttaat
acttcagtagatactcacaagataaaatccagcccatcacctgaagttgttaaacccaaa
ataactcattctcctgattctgtaaagtctaaggccacttatgtgaacagccaagctact
ggtgaaagaagactggcaaataagatagaacatgagctatcaagatgcagttttcatcca
attcctactcgaagcagtacattagaaactacaaagagtcctcttatcattgataaaaat
gagcattttacagtttacagagatcctgcacttattgggtcagaaacaggagctaatcat
atttcacctttcctaagccagcatccttttcctcttcactcctcatctcatagaacctgt
ttaaatccaggtacccatcatcctgccttaactcctgcaccccatttactagccggatca
tctagtcaaactccattacctaccattaacactcatcctctgactagtggtccacaccat
gctgttcatcaccctcatttacttcccactgtgttacctggagtgcctactgcctcctta
cttggtggccacccacgactagagagtgctcatgccagcagcttgagccacttagcgcta
gcacaccagcaacaacaacagttgttacagcaccagtcacctcatcttcttggacaagcc
catccttctgcttcatataatcagcttggactttatccaattatttggcagtatccaaat
ggaacacatgcatactcaggacttggtttgccttcttctaagtgggttcacccagaaaat
gcagttaatgctgaagcttcgttaaggaggaattctcccagtccttggctacatcagccc
acccctgtgacctcagcagatggtattggattacttagccacattcctgtcagaccttcc
agtgcagagcctcatcggcctcttaaaattacagcccattccagtccaccattgacaaaa
actttagtagatcatcataaggaagaattagaaagaaaagcttttatggaaccattacgg
tctgttgcatccacatcagccaaaaatgacctggatctaaataggtcacagactggaaaa
gattgtcacttacataggcattttgtggatccagtattaaatcaattacagaggccaccc
caggagactggagagaggttaaacaaatacaaagaggaacaccgtcgaattcttcaagaa
agtattgatgttgctccctttacaactaaaatcaagggagttgagggtgagagagagaat
tattccagagtggcatcatcatcttccagtcctaaaagccatatcatcaaacaagatatg
gatgtagaacgctcagtatcagatctttataaaatgaagcactcagtgcctcagagttta
ccccaaagtaactatttcactacattgtctaatagtgtggtcaatgaaccaccaagatca
tacccatccaaagaagtttcaaatatttacggtgataaacagagtaatgcccttgcagcg
gcagcagctaatcctcaaactctgacttcatttataacatctctttcaaagcctccacct
ttgattaaacaccaaccagaaagtgaaggtttagtaggcaagataccagaacatcttcca
catcagattgcatctcactcagtaacaaccttcagaaatgattgtaggagtcctacccat
ttgacagtttcttctacaaatacactccgcagtatgcctgcattacatagagcaccagta
tttcacccaccaatccatcacagcctggaaagaaaggaaggcagctatagtagtctttcc
cctccaactttaactccggtgatgccagtaaatgctggtggtaaagttcaagaatcacag
aagcctccaactctaatacccgaaccaaaagactcccaggcaaattttaagagttcttca
gaacagagtttgacggagatgtggagacctaataataacctcagcaaagagaaaactgaa
tggcatgtggagaaaagcagcggaaagttacaggctgctatggcatctgtcattgtgcgt
ccatcttctagtacaaaaactgatagtatgccagcaatgcagttagcttctaaagatcga
gttagtgaaagatcttcagctggggcacataaaacagattgcctcaaactagcagaagcc
ggagaaactggaagaatcattttgccaaatgtgaattcagacagtgttcacacaaaatct
gaaaaaaactttcaggctgtctcacagggcagtgttcccagttcagtcatgtctgctgta
aatacgatgtgtaataccaaaacggatgtaatcacatctgctgccgatactaccagtgtt
tccagctggggtggttcagaagtaatttcctctttatcaaataccattttggcctctaca
tcatcagaatgtgtatcttcaaaaagtgtcagtcagccagtggctcaaaaacaagaatgc
aaggtcagcaccacagcaccagttacattggccagtagtaagacaggaagtgttgttcaa
cccagttctgggttctcaggcacaactgattttatccatttaaaaaagcacaaggcagca
ttggctgcagctcagtataaaagtagtaatgccagtgagactgaacctaatgctataaaa
aatcagacactttcagcctcccttcctctggatagcactgtaatctgtagtacaattaac
aaagcaaactctgtaggaaatgggcaagcttcccagacaagtcaaccaaactaccatact
aaactgaaaaaggcctggctcaccagacactcagaagaagataaaaatactaataaaatg
gaaaattcagggaattctgtatcagaaattattaagccatgttctgtcaacttaatagcc
tctacatctagtgatatacaaaatagtgtagatagtaagatcatagttgataaatatgta
aaagatgataaagtcaacaggagaaaagccaaaagaacttatgaatctggctctgaaagt
ggagactcagatgaaagtgaaagcaagtcagagcaaaggactaaaagacaacctaagcca
acttacaaaaagaagcaaaatgatttgcaaaagagaaaaggtgaaatagaagaagatttg
aaacccaatggagttctcagcaggagtgccaaagaaagaagtaaactgaagttgcaaagc
aacagtaatactggcattcctcgttcagtattgaaagattggcgtaaagtcaagaagctg
aagcaaactggggaatcctttttacaggatgactcctgctgtgagatagggcctaattta
caaaagtgtcgagaatgtagacttattcgcagtaaaaaaggagaagaaccagctcactca
ccagtattttgtagattttactactttagacggttgtcatttagtaaaaacggagtagtt
agaatagatggtttctcttctcctgaccaatatgatgatgaagctatgagtttgtggaca
catgaaaattttgaagatgatgaactagatatagagacttctaaatatatcttggatata
ataggtgataagttctgtcaattagtaacatctgaaaaaacagctttgtcctgggtgaaa
aaggatgccaaaattgcctggaaaagagcagtgagaggagtccgggagatgtgtgatgca
tgtgaagcaacattgtttaacattcactgggtctgccaaaaatgtggatttgtggtctgc
ttagattgttacaaggcaaaggaaaggaagagttctagagataaagaactatatgcttgg
atgaagtgtgtgaagggacagcctcatgatcacaaacatttaatgccaacccaaattata
cctggttctgttttgacagatcttctagatgccatgcacactcttagggaaaaatatggt
attaaatcccattgtcattgtactaacaaacagaatttacaagttggaaattttcctaca
atgaatggtgtatctcaagttttacagaatgttcttaatcacagtaataaaatttctcta
tgcatgcctgagtctcagcagcaaaatactcctccgaagtctgagaaaaatggtggcagc
agcccagagagtgatgtaggcacagataacaagttaactcctccagaatcccagtcacca
ctgcactggttagcagatcttgcagagcaaaaagccagagaggaaaaaaaagaaaacaaa
gaacttacccttgaaaaccaaattaaagaagaaagagaacaagacaactctgaatctcca
aatggcagaacatcacctcttgtgtcccagaataatgaacaaggctcaaccttacgggat
ttgctgactacaacagctggaaagctacgtgtggggtctacagatgctggcattgccttt
gccccagtatattcaatgggagccccaagtagcaaaagtggacggactatgcctaacatt
cttgatgacataattgcttcagttgttgaaaacaaaattccaccaagtaaaacctccaag
ataaatgtaaaaccagagcttaaagaagagcctgaagaaagcataatatctgcagtggat
gaaaataataaattatacagtgatataccacattcttggatctgtgagaagcatatttta
tggcttaaggattataagaatagcagtaattggaagcttttcaaagaatgttggaaacaa
ggacagcctgcagtggtttctggtgtgcataagaaaatgaacattagcctatggaaggcg
gaatcaattagtcttgattttggagaccaccaagctgatctcctgaactgcaaagatagc
atcatttcaaatgccaatgttaaggaattctgggatggttttgaagaagtttcaaaacgg
cagaaaaacaagagtggagaaacagttgttttaaaattgaaagattggccttcaggagaa
gacttcaagactatgatgccagcaagatacgaagatcttttaaaaagtctgccattgcca
gaatattgtaatccagaaggaaaattcaatttggcctctcatttgccaggattttttgta
cgtcctgatctaggacccaggttgtgcagtgcctatggtgtagttgctgctaaagatcat
gatataggaacaacaaatctccatattgaagtttctgatgttgtaaatatactagtttat
gttggcatagcaaaaggaaatggcattctctcaaaagcaggaattctcaagaaatttgag
gaagaagatttggatgacattttaaggaaaagattgaaggactcaagtgaaatacctggt
gctctgtggcatatttatgctgggaaagatgttgacaagataagggaatttcttcaaaag
atttcaaaagaacaaggccttgaagttctaccagaacatgatccaatacgtgaccaaagt
tggtatgtgaacaaaaagctccgtcaaaggctgcttgaagaatatggagtcagaacctgt
actcttattcagttccttggtgatgctattgttttgccagcgggagcacttcatcaggtt
cagaattttcacagctgtattcaggtaactgaagattttgtgtctccagaacatcttgta
gagtcatttcatttaacacaggaactgagacttttgaaggaagaaatcaattatgatgat
aaactacaggttaaaaatattttgtatcatgcagtcaaagaaatggtgagagccttgaag
atacacgaggatgaagtagaggatatggaagaaaattaa
DBGET
integrated database retrieval system
