KEGG T01005: 450651

Pan troglodytes (chimpanzee): 450651

Entry

450651            CDS       T01005

Symbol

EXOSC1

Name

(RefSeq) exosome complex component CSL4 isoform X1

K07573

exosome complex component CSL4

Organism

ptr Pan troglodytes (chimpanzee)

Pathway

ptr03018

RNA degradation

Brite

KEGG Orthology (KO) [BR:ptr00001]
09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    450651 (EXOSC1)
09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:ptr03019]
    450651 (EXOSC1)
Messenger RNA biogenesis [BR:ptr03019]
Eukaryotic type
  mRNA degradation factors
   3'-5' decay
    Core exosome factors
     450651 (EXOSC1)
Prokaryotic type
  Archeal mRNA degradation factors
   Exosome components
    Core exosome
     450651 (EXOSC1)

SSDB

Motif

Pfam:

EXOSC1 ECR1_N RRP4_S1 Nairovirus_NSm

Other DBs

NCBI-GeneID:

NCBI-ProteinID:

Ensembl:

VGNC:

LinkDB

Position

8:complement(109556958..109566851)

AA seq 211 aa
MRKRLRFHPGFGTAAIMAPPVRYCIPGERLCNLEEGSPGSGTYTRHGYIFSSLAGCLMKS
SENGALPVVSVVRETESQLLPDVGAIVTCKVSSINSRFAKVHILYVGSMPLKNSFRGTIR
KEDVRATEKDKVEIYKSFRPGDIVLAKVISLGDAQSNYLLTTAENELGVVVAHSESGIQM
VPISWCEMQCPKTHTKEFRKVARVQPEFLQT

NT seq 636 nt +upstreamnt +downstreamnt
atgagaaagcgacttcgttttcatccgggttttgggacagcggcaatcatggcgccaccc
gtgagatactgcatccccggcgaacgtctgtgtaacttggaggagggcagcccgggcagc
ggcacctacacccgccacggctacatcttttcgtcgcttgccggttgtctgatgaagagc
agcgagaatggcgcgcttccagtggtgtctgtagtgagagaaacagagtcccagttactg
ccagatgtgggagctattgtaacctgtaaggtctctagcatcaattcacgctttgccaaa
gtacacatcctgtatgtggggtccatgccacttaagaactcttttcgaggaactatccgc
aaggaagatgtccgagcaactgaaaaagacaaggttgaaatttataagagtttccgccca
ggtgacattgtcttggccaaagtgatctccttaggtgatgcacagtccaactacctgcta
accaccgccgagaacgagctgggagtggtggtagcccacagtgagtcaggtatccagatg
gttcccatcagctggtgtgagatgcagtgccctaagacccacactaaagaattccggaaa
gtagcccgagtacaacccgaattcttgcagacctaa

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