Pan troglodytes (chimpanzee): 450711
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Entry
450711 CDS
T01005
Symbol
PDCD11
Name
(RefSeq) protein RRP5 homolog isoform X1
KO
K14792
rRNA biogenesis protein RRP5
Organism
ptr
Pan troglodytes (chimpanzee)
Brite
KEGG Orthology (KO) [BR:
ptr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ptr03009
]
450711 (PDCD11)
Ribosome biogenesis [BR:
ptr03009
]
Eukaryotic type
90S particles
Other 90S particles
450711 (PDCD11)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
S1_RRP5
S1
Spt6_S1
HAT_PRP39_N
HAT_Syf1_CNRKL1_N
OB_RRP5_4th
HAT_PRP39_C
Suf
OB_RRP5
TPR_14
HAT_Syf1_CNRKL1_C
TPR_19
ARM_TT21
UTP6_C
TPR_16
DUF2110
DUF7017
TPR_CcmH_CycH
ARM_TT21_5th
ARM_TT21_C
PPR
TPR_2
Motif
Other DBs
NCBI-GeneID:
450711
NCBI-ProteinID:
XP_009457466
Ensembl:
ENSPTRG00000002911
VGNC:
5591
UniProt:
A0A2J8PCT7
LinkDB
All DBs
Position
8:115502368..115551760
Genome browser
AA seq
1872 aa
AA seq
DB search
MANLEESFPRGGTRKIHKPEKAFQQSVEQDNLFDISTEEGSTKRKKSQKGPAKTKKLKIE
KRESSKSAREKFEILSVESLCEGMRILGCVKEVNELELVISLPNGLQGFVQVTEICDAYT
KKLNEQVTQEQPLKDLLHLPELFSPGMLVRCVVSSLGITDRGKKSVKLSLNPKNVNRVLS
AEALKPGMLLTGTVSSLEDHGYLVDIGVDGTRAFLPLLKAQEYIRQKNKGAKLKVGQYLN
CIVEKVKGNGGVVSLSVGHSEVSTAIATEQQSWNLNNLLPGLVVKAQVQKVTPFGLTLNF
LTFFTGVVDFMHLDPKKAGTYFSNQAVRACILCVHPRTRVVRLSLRPIFLQPGRPLTRLS
CQNLGAVLDDVPVQGFFKKAGATFRLKDGVLAYARLSHLSDSKNVFNPEAFKPGNTHKCR
IIDYSQMDELALLSLRTSIIEAQYLRYHDIEPGAVVKGTVLTIKSYGMLVKVGEQMRGLV
PPMHLADILMKNPEKKYHIGDEVKCRVLLCDPEAKKLMMTLKKTLIESKLPVINCYADAK
PGLQTHGFIIRVKDYGCIVKFYNSVQGLVPKHELSTEYIPDPERVFYTGQVVKVVVLNCE
PSKERMLLSFKLSSDPEPKKEPAGHSQKKGKAINTGQLVDVKVLEKTKDGLEVAVLPHNI
RAFLPTSHLSDHVANGPLLHHWLQAGDILHRVLCLSQSEGRVLLCRKPALVSTVEGGQDP
KNFSEIHPGMLLIGFVKSIKDYGVFIQFPSGLSGLAPKAIMSDKFVTSTSDHFVEGQTVA
AKVTNVDEEKQRMLLSLRLSDCGLGDLAITSLLLLNQCLEELQGVRSLMSNRDSVLIQTL
AEMTPGMFLDLVVREVLEDGSVVFSGGPVPDLVLKASRYHRAGQEVESGQKKKVVILNVD
LLKLEVHVSLHQDLVNRKARKLRKGSEHQAVVQHLEKSFAIASLVETGHLAAFSLTSHLN
DTFRFDSEKLQVGQGVSLTLKTTEPGVTGLLLAVEGPAAKRTMRPTRKDSETVDEDEEVD
PALTVGTIKKHTLSIGDMVTGTVKSIKPTHVVVTLEDGIIGCIHASHILDDVPEGTSPTT
KLKVGKTVTARVIGGRDMKTFKYLPISHPRFVRTIPELSVRPSELEDGHTALNTHSVSPV
EKIKQYQAGQTVTCFLKKYNVVKKWLEVEIAPDIRGRIPLLLTSLSFKVLKHPDKKFRVG
QALRATVVGPDSSKTFLCLSLTGPHKLEEGEVAMGRVVKVTPNEGLTVSFPFGKIGTVSI
FHMSDSYSETPLEDFVPQKVVRCYILSTADNVLTLSLRSSRTNPETKSKVEDPEINSIQD
IKEGQLLRGYVGSIQPHGVFFRLGPSVVGLARYSHVSQHSPSKKTLYNKHLPEGKLLTAR
VLRLNHQKNLVELSFLPGDTGKPDVLSASLEGQLTKQEERKTEAEKRDQKGEKKNQKRNE
KKNQKGQEEVEMPSKEEQQPQKPQAQKRGGQECRESGSEQERVSKKPKKAGLSEEDDSLV
DVYYREGKEEAEETNVLPKEKQTKPAEAPRLQLSSGFAWNVGLDSLTPALPPLAESSDSE
EDEKPHQATQIKKSKKERELEKQKAEKELSRIEEALMDPGWQPESADDFDRLVLSSPNSS
ILWLQYMAFHLQATEIEKARAVAERALKTISFREEQEKLNVWVALLNLENMYGSQESLTK
VFERAVQYNEPLKVFLHLADIYAKSEKFQEAGELYNRMLKRFRQEKAVWIKYGAFLLRRS
QAAASHRVLQRALECLPSKEHVDVIAKFAQLEFQLGDAERAKAIFENTLSTYPKRTDVWS
VYIDMTIKHGSQKDVRDIFERVIHLSLAPKRMKFFFKRYLDYEKQHGTEKDVQAVKAKAL
EYVEAKSSVLED
NT seq
5619 nt
NT seq
+upstream
nt +downstream
nt
atggcaaacctggaagaaagcttcccccgaggaggtacaagaaagatccacaaaccagag
aaagctttccagcagtcagttgaacaagacaacttatttgatatttctactgaagaggga
tccaccaaaagaaaaaagagccagaaggggccagcaaaaacaaaaaagttgaaaatcgaa
aagagagaaagcagcaagtccgcaagagagaagtttgaaatccttagtgttgagtccctg
tgtgagggaatgcggattttgggttgcgtgaaagaggtgaatgaactggaactggtgatt
agtctccccaatggcctccagggctttgtgcaagtcactgaaatctgtgatgcctacacc
aaaaagctgaatgagcaggtgacacaagaacaacctctgaaggacctacttcacttgcct
gaacttttctcacctggaatgctggtaagatgtgtggtgagcagtctgggcatcacagac
aggggcaagaagagtgtcaagctgtctctgaaccccaaaaatgtcaacagagtgctgagt
gctgaggccctgaagcctggcatgctacttacaggtaccgtatccagcctggaagaccat
ggctacctagtggacattggtgttgatgggaccagagcttttctgccactgctgaaagcc
caggagtacatcagacagaagaacaaaggtgctaaactaaaggtgggtcagtacctgaac
tgcattgttgaaaaggtgaaaggcaacggaggagttgttagtctgtctgttggtcactca
gaggtttctacggccattgctactgaacagcagagctggaaccttaataacttgctacca
ggactggtggtcaaagctcaggtacagaaggtgactccatttggccttacgctaaacttc
ctcacattcttcacgggcgtggttgactttatgcacctggatcccaagaaagctggaaca
tatttctcaaatcaggcggtgagggcctgcatcctttgcgtccatcctcgaaccagagtt
gtgcgcctgagcctgcgccccatcttcctacagcctggacgcccactcacccgactctct
tgccagaaccttggagcagtgctggatgatgttcctgtccagggttttttcaaaaaggct
ggggccacctttaggctgaaggatggggttctggcctatgcccggctcagccatctctct
gattctaagaacgtcttcaatcctgaggccttcaagccagggaacactcacaagtgtaga
attattgactacagccaaatggatgaactggccttgctctctctacgaacgtctattatt
gaagctcagtaccttagatatcatgacatcgaacctggggcagtggtaaagggcacagtg
ctaaccataaagtcatatgggatgctggtgaaggtgggcgagcagatgaggggcctggta
cctcccatgcacctggctgacatcctgatgaagaatccagagaagaagtaccacatcggg
gatgaggtcaagtgccgggttttgctttgtgaccctgaagccaagaagctgatgatgacc
ctgaaaaaaaccctgattgagtccaaactacctgtcattaactgctatgccgatgccaag
cctggtctgcagacacatggcttcatcatcagggtcaaggactatggctgcattgtgaag
ttctacaacagtgtgcagggactggtgcccaagcatgagctcagtactgagtatatccct
gacccggagagagttttttacactggccaggtggtgaaggttgtcgtattgaactgtgag
ccatccaaagagaggatgcttttatccttcaagctgtcgagtgatccagagccgaagaaa
gagcctgcaggacacagtcagaagaaaggaaaagccattaacactgggcagttggtagat
gtgaaggttttagagaagaccaaagatgggctggaggtggctgtcctgccccacaacatc
cgtgctttcctccccacatctcatctgtcggaccacgttgccaacggcccattgttacat
cattggctccaggcaggtgacatccttcaccgagtcctgtgtctgagccagagcgagggg
cgcgttcttctttgcaggaagccagccttggtctccacagtagaaggtggccaggatccc
aagaacttctcagaaatccatcctggaatgctgctcattggttttgtgaagagcatcaag
gactatggcgtgttcatccagttcccctcaggtcttagcggactggccccaaaagctatc
atgagtgacaaatttgtgacctccacaagtgaccactttgttgagggccagacagtagcg
gcaaaggtgaccaatgtggatgaggagaagcagcggatgctgctgtcactgcggctgtct
gactgtggtctgggggacttggccatcaccagcctcctcctcctgaatcagtgcctggag
gagctgcagggcgtgcgcagccttatgagcaaccgagactctgtgttgatccagacgctg
gccgagatgaccccaggaatgttccttgacctagtggtgcgggaggtgttggaagatggc
tctgtggtattcagtgggggtccagtgcccgacctggtcctgaaagccagcagataccat
cgcgcagggcaggaggtggaatctgggcagaaaaagaaggttgttatcttaaatgttgat
cttttgaagttggaagtgcacgtttcccttcaccaggacttggtgaatagaaaagctaga
aagctgaggaaaggcagcgaacaccaggcggttgtgcagcacttggagaagtcctttgcc
attgcctccttggtagagacgggccacctggcagctttctccctgacctctcacctcaac
gacaccttccgctttgactcagagaaattacaggtgggacagggtgtctccctaaccctc
aagaccacagaaccaggagtgactggccttcttttggctgtggaggggccggctgccaag
aggaccatgaggccgacccggaaggactctgagacagttgatgaggatgaagaagtggat
ccagctctgactgtagggaccataaagaagcacaccctctccatcggggacatggtcaca
gggactgtcaagtccattaagcctacccatgtggttgtgactctggaagatggcattatt
ggctgtatccatgcctcccacattctagatgatgttccagagggcacctctcctactacc
aagctgaaggttgggaagacggtcactgcccgagtgattggcgggcgagacatgaagaca
ttcaagtatctcccaataagtcaccccagattcgttcgaaccatcccggagctgagtgtt
cggccaagtgagctggaggatggccacactgctcttaacactcactctgttagccccgtg
gagaagattaaacagtaccaggccggccagactgttacttgcttcttaaagaaatacaat
gtggtgaagaaatggcttgaggtggagattgccccagacatccgggggagaattccctta
ttgctcacttctctgagcttcaaggttctgaagcatccagataagaagttccgggttggc
caggccctgagggccactgttgttggcccagattcctccaagaccttcttatgtctgtcc
ctcacaggtcctcacaagcttgaggaaggggaagtggccatgggccgagtggtgaaggtg
actcccaacgagggactgaccgtctccttcccctttgggaagataggaacagtcagtata
tttcacatgagtgactcctactccgagacgcccctggaagacttcgtcccccagaaggtt
gtcagatgttacatcctgtccactgcagacaacgtattgactttgtcgctgcgatcatcc
agaacaaacccggagacgaaaagcaaagtagaagatccagagattaactccatccaggac
attaaggaagggcagcttctgaggggctatgtagggtccatccagccacacggtgtgttc
tttcgccttggcccctccgttgtgggtttggctcggtactcccatgtctcccagcacagc
ccgtccaagaaaaccctttataacaaacacctccctgaagggaagctgctcacagccagg
gtcctacgccttaaccaccagaagaacctggtagagctgtctttcctccccggagacact
gggaagccagacgtgctttctgcttccttggaagggcaacttacaaagcaagaggagagg
aaaacagaggctgagaagagagaccaaaaaggggaaaagaaaaatcagaaaaggaacgag
aagaagaaccagaaggggcaggaggaggtggagatgcccagcaaggaggagcaacagccc
cagaagccacaggcgcagaagcggggcgggcaggagtgccgggagtctgggagtgagcag
gaaagagtgagcaagaagccaaagaaagccggcctgtcagaggaggacgacagccttgtg
gacgtgtactatcgggagggaaaagaggaggcagaagagacgaatgtgctgcccaaggag
aagcaaaccaagccagcagaagcgccccggctgcagctatcttcaggcttcgcttggaat
gtgggactagactctctgaccccggccttgccacctctagcagagagctcagacagcgag
gaggatgagaagccacaccaagccacgcagataaagaaaagcaagaaagaaagggagttg
gagaagcagaaggcagagaaggaactgtcccgcattgaggaggcgctgatggatcctggg
tggcagccagagtccgcggatgattttgaccgactggtgctgagctcccccaatagctct
attctgtggctgcagtacatggctttccacctgcaggccacggagatcgagaaggcccgt
gccgtggctgagagggcccttaagaccatctccttcagagaggagcaggagaagctgaac
gtgtgggtggctctgctgaacctggagaacatgtatggctctcaggagtccctgaccaag
gtctttgagcgagccgtgcagtacaacgagcctctcaaagtctttctccacctggctgac
atctacgccaagtcagagaaattccaggaagctggtgaactctacaaccggatgctgaag
cgtttccggcaggagaaagctgtgtggatcaaatacggtgccttccttctgcggaggagc
caggctgcagccagtcaccgcgtgctgcagcgagccctggagtgcctgcctagcaaggag
catgtggatgtcattgccaagtttgcccagcttgagtttcagctgggggatgcagagcgg
gccaaagccatttttgagaacacgctgagcacctacccaaagcgcacagatgtctggtcg
gtctatatcgacatgaccatcaagcacggcagccagaaggacgtccgggacatctttgag
cgggtcattcatctgagcttggcccccaagagaatgaagttcttcttcaagcgctacctg
gactacgagaagcagcatggcactgagaaggatgtgcaggcagtcaaggccaaggccctg
gagtatgtggaggccaagagctcagtgctagaggactag
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