Pan troglodytes (chimpanzee): 451384
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Entry
451384 CDS
T01005
Symbol
IGHMBP2
Name
(RefSeq) DNA-binding protein SMUBP-2 isoform X1
KO
K19036
ATP-dependent RNA/DNA helicase IGHMBP2 [EC:
5.6.2.5
5.6.2.3
]
Organism
ptr
Pan troglodytes (chimpanzee)
Brite
KEGG Orthology (KO) [BR:
ptr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ptr03009
]
451384 (IGHMBP2)
03012 Translation factors [BR:
ptr03012
]
451384 (IGHMBP2)
Enzymes [BR:
ptr01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
451384 (IGHMBP2)
5.6.2.5 RNA 5'-3' helicase
451384 (IGHMBP2)
Ribosome biogenesis [BR:
ptr03009
]
Eukaryotic type
Other ribosome biogenesis factors
451384 (IGHMBP2)
Translation factors [BR:
ptr03012
]
Eukaryotic type
Initiation factors
Initiation associated factors
451384 (IGHMBP2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_11
AAA_12
SMUBP-2_HCS1_1B
R3H
AAA_30
AAA_19
ResIII
Viral_helicase1
DEAD
nSTAND3
AAA_16
Helicase_RecD
AAA_22
UvrD-helicase
SLFN-g3_helicase
IstB_IS21
zf-AN1
PhoH
AAA_25
Flavi_DEAD
DnaB_C
ABC_tran
Zot
AAA
NPHP3_N
NTPase_1
UvrD_C_2
DAP3
VWA_2
ATPase
Ada3
Motif
Other DBs
NCBI-GeneID:
451384
NCBI-ProteinID:
XP_054518449
Ensembl:
ENSPTRG00000003989
VGNC:
1063
LinkDB
All DBs
Position
9:70951086..70990121
Genome browser
AA seq
1075 aa
AA seq
DB search
MLWLHADASRPKVTVREDAAMAAAIFPQPRPETETTRTAYVTHGPGGEHRSRCNTGPAQK
RDVGCSRPRPAAAMASAMASAAVESFVTKQLDLLELERDAEVEERRSWQENISLKELQSR
GVCLLKLQVSSQRTGLYGRLLVTFEPRRCGSAAALPSNSFTSGDIVGLYDAANEGSQLAT
GILTRVTQKSVTVAFDESHDFQLSLDRENSYRLLKLANDVTYRRLKKALIALKKYHSGPA
SSLIEVLFGRSAPSPASEIHPLTFFNTCLDTSQKEAVSFALSQKELAIIHGPPGTGKTTT
VVEIILQAVKQGLKVLCCAPSNIAVDNLVERLALCKQRILRLGHPARLLESIQQHSLDAV
LARSDSAQIVADIRKDIDQVFVKNKKTQDKREKSNFRNEIKLLRKELKEREEAAMLESLT
SANVVLATNTGASADGPLKLLPESHFDVVVIDECAQALEASCWIPLLKARKCILAGDHKQ
LPPTTVSHKAALAGLSLSLMERLAEEYGARVVRTLTVQYRMHQAIMRWASDTMYLGQLTA
HSSVAGHLLRDLPGVAATEETGVPLLLVDTAGCGLFELEEEDEQSKGNPGEVRLVSLHIQ
ALVDAGVPARDIAVVSPYNLQVDLLRQSLVHRHPELEIKSVDGFQGREKEAVILSFVRSN
RKGEVGFLAEDRRINVAVTRARRHVAVICDSRTVNNHAFLKTLVEYFTQHGEVRTAFEYL
DDIVPENYSHESSQGSSHAATKPQGPATSTRTGSQRQEGGQEATAPARQGRKKPAGKSLA
SEAPSQPSLNGGSPEGVESQDGVDHFRAMIVEFMASKKMQLEFPPSLNSHDRLRVHQIAE
EHGLRHDSSGEGKRRFITVSKRAPPALRPRAALGPPAGTGGPAPLQPVPASPAQTEQPPR
EQRGPDQPDLRTLHLERLQRVRNAQRQPASKEQQASGQQKLPEKKKKKEAKGHPATALPT
EEDFEALVSAAVKADNTCGFAKCTAGVTTLGQFCELCSHRYCLSHHLPEVFFCGPSHQEE
LEVEEGSQHQRWAGRLGGGSFWNRRDLSLNASQHHCPLRCGLSKSPLLSEPVCHL
NT seq
3228 nt
NT seq
+upstream
nt +downstream
nt
atgctgtggctgcacgcggacgccagccgccctaaggtgaccgtcagggaagatgctgcc
atggccgccgccatcttcccgcagcctcggccggaaacggaaacgacgcgaaccgcgtac
gtaacgcacgggcccggcggggaacaccggtcccgctgtaacaccggcccggcgcagaag
cgggacgtcggctgttcgcggcccaggccggcggcggcgatggcctcggcgatggcctcg
gcagctgtggagagcttcgtgaccaagcaactggacctgctggagctcgagagagacgcg
gaggtggaggagcgcaggtcctggcaggagaacatctctctgaaagagctccagagccga
ggcgtgtgtttgctgaagctgcaggtatccagccaacgcactgggctgtacggacggctg
ctggtcacctttgagcccaggcgatgcgggtccgcggcagctcttcccagtaacagcttt
acttctggtgatatcgtgggcctgtacgatgctgctaatgagggcagtcagctggccacc
gggatcctgacccgggtcacccagaagtcggtcacggtggcctttgatgagtcccacgat
ttccagttgagcttggaccgagagaattcctacagactgttaaaacttgccaatgatgtc
acttacaggcgactgaaaaaagccctgattgctctgaagaagtatcattctggcccagcc
tcctcactcatagaagtgctctttggcagatctgctcccagtcctgccagtgaaatacac
ccgctgacattcttcaacacctgcctggacacctcccagaaagaagcggtttcatttgcg
ctgtctcagaaagaacttgccatcatccatggacctcctggcactgggaaaaccacgact
gtggttgagataattcttcaagctgtgaaacaaggcttaaaggttctgtgctgcgccccc
tccaacatcgccgtggacaatctggtggagcgcctggctctgtgtaagcagcggattctg
cgcctggggcaccccgcccgcctcctggagtccattcagcagcactccctggatgcggtt
ttagcgcggagcgacagtgcccagattgttgcagatatcaggaaggacatcgaccaggtc
tttgtgaaaaacaaaaagacccaggataagagagagaaaagtaattttcgaaatgaaatt
aaactgttaagaaaagaactgaaggagagggaagaagcagctatgctcgagagcctcact
tcggcaaatgtggtccttgcaacaaacacaggtgcgtctgccgatggccccctgaagttg
ctgcccgagagccacttcgacgtggtggtcattgatgagtgtgcccaggccctcgaggcg
agctgctggatccccctgctgaaggccagaaagtgcatcctggcgggcgatcacaagcag
ctgccccccaccacagtctctcacaaggctgcgctggcagggctgtcgctcagcctgatg
gaacgcctggctgaggagtacggcgcgagggtggtgcggacactgacggtgcagtaccgc
atgcaccaggctatcatgcgctgggcctcggacaccatgtaccttgggcagctcacagcc
cactcttccgtggcagggcacctcctgagggacctcccaggtgtggctgccacagaagag
acgggtgtgcccctgctcctggtggacaccgccggctgcgggctgtttgagctggaggag
gaggacgaacagtcgaaagggaaccctggcgaagtccgcctcgtcagtttgcacatccag
gctctggtggacgctggtgttccagcccgtgacattgccgtggtctcgccatacaacctc
caggtggacctgctcagacagagccttgtgcacaggcaccccgagcttgaaatcaagtct
gtcgatggcttccaaggccgagagaaggaggccgtgatactgtccttcgtcagatccaac
aggaaaggtgaagttggttttcttgctgaggaccggaggatcaacgtggctgtcacccgt
gcccgacgccacgtggcggtcatctgtgactcccgtactgtcaacaaccatgcatttttg
aagaccctggtggagtatttcacacagcatggggaagtacgcacggcctttgagtatctt
gacgatattgtcccagaaaactattcccatgagagctcccagggttccagccacgctgcc
accaagccccagggacctgctacgtccaccaggaccggaagccagcggcaggagggaggc
caggaggccacagcacctgccagacagggccggaagaagccggctgggaagtctctggcc
tctgaagccccatctcagcccagcctcaacggaggcagcccagagggagtggagagccaa
gatggcgtggaccacttccgggccatgatagtggagttcatggccagcaagaagatgcag
ttggagtttcctccttccctcaattcccacgacaggctgcgggtccaccaaatagccgag
gagcacgggctgaggcacgacagttccggggaagggaagaggaggttcatcactgtgagc
aagagggccccgccggccctgcgaccccgagcagccctgggacccccagcagggaccggt
ggcccagcccctctccagccagtgcccgctagccctgcgcagacggagcagcctccgagg
gagcagcgtggcccagaccagcctgatctgaggacgctgcacctggagagactgcagaga
gtcagaaacgcgcagaggcagcccgccagcaaggagcagcaggcctcagggcagcagaaa
cttccagaaaagaaaaagaaaaaagaagccaaaggacatccggccacagctctgcccacg
gaggaggactttgaggccctggtttctgccgccgttaaggctgataacacctgcggcttt
gccaagtgcacagccggcgtcacaaccctgggccagttctgcgagctctgcagccaccgc
tactgcctcagccaccacctgcccgaggtgttcttctgtgggccgtcccaccaggaggag
cttgaagtagaggaaggcagccagcatcagcggtgggccgggcggttggggggtggaagc
ttctggaatcggagggacctgagtctgaatgccagccagcaccactgtccactgaggtgt
ggcctcagcaagtcacctctcctctctgagcctgtttgtcatctgtga
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