Pan troglodytes (chimpanzee): 452068
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Entry
452068 CDS
T01005
Symbol
CPSF6
Name
(RefSeq) cleavage and polyadenylation specificity factor subunit 6 isoform X4
KO
K14398
cleavage and polyadenylation specificity factor subunit 6/7
Organism
ptr
Pan troglodytes (chimpanzee)
Pathway
ptr03015
mRNA surveillance pathway
ptr03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
ptr00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
452068 (CPSF6)
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
452068 (CPSF6)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ptr03019
]
452068 (CPSF6)
Messenger RNA biogenesis [BR:
ptr03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Pre-mRNA cleavage factor Im (CFIm)
452068 (CPSF6)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
PRP38_assoc
Motif
Other DBs
NCBI-GeneID:
452068
NCBI-ProteinID:
XP_003313896
Ensembl:
ENSPTRG00000005205
VGNC:
5347
UniProt:
K7CF67
A0A803KIV9
LinkDB
All DBs
Position
12:66752224..66787515
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AA seq
551 aa
AA seq
DB search
MADGVDHIDIYADVGEEFNQEAEYGGHDQIDLYDDVISPSANNGDAPEDRDYMDTLPPTV
GDDVGKGAAPNVVYTYTGKRIALYIGNLTWWTTDEDLTEAVHSLGVNDILEIKFFENRAN
GQSKGFALVGVGSEASSKKLMDLLPKRELHGQNPVVTPCNKQFLSQFEMQSRKTTQSGQM
SGEGKAGPPGGSSRAAFPQGGRGRGRFPGAVPGGDRFPGPAGPGGPPPPFPAGQTPPRPP
LGPPGPPGPPGPPPPGQVLPPPLAGPPNRGDRPPPPVLFPGQPFGQPPLGPLPPGPPPPV
PGYGPPPGPPPPQQGPPPPPGPFPPRPPGPLGPPLTLAPPPHLPGPPPGAPPPAPHVNPA
FFPPPTNSGMPTSDSRGPPPTDPYGRPPPYDRGDYGPPGREMDTARTPLSEAEFEEIMNR
NRAISSSAISRAVSDASAGDYGSAIETLVTAISLIKQSKVSADDRCKVLISSLQDCLHGI
ESKSYGSGSRRERSRERDHSRSREKSRRHKSRSRDRHDDYYRERSRERERHRDRDRDRDR
ERDREREYRHR
NT seq
1656 nt
NT seq
+upstream
nt +downstream
nt
atggcggacggcgtggaccacatagacatttacgcggatgtcggcgaagagttcaaccag
gaagctgaatatggtgggcatgatcagatagatttgtatgacgatgtcatatctccatct
gcaaataatggagatgccccagaagaccgggattacatggatactctcccaccaactgtt
ggtgatgatgtgggtaaaggagcagcaccaaatgttgtctatacgtatactggaaagaga
attgcattatatattggaaatctaacatggtggacaacagatgaagacttaactgaagca
gttcattctttgggagtaaatgatattttggagataaaattttttgaaaatcgggcaaat
ggccagtcaaaggggtttgcccttgttggtgttggatctgaagcatcttcaaaaaagtta
atggatctgttgcctaaaagagaacttcatggtcagaatcctgttgtaactccatgcaat
aaacagttcctgagtcaatttgaaatgcagtccaggaaaactacacaatcaggacaaatg
tctggggaaggtaaagctggtcctccaggaggcagttcccgtgcagcatttccacaaggt
ggtagaggacggggccgttttccaggggctgttcctggtggggacagatttcctgggcca
gcaggaccaggagggccacccccaccttttccagctggacagactccaccacgtccaccc
ttaggtcctccaggcccacctggtccaccaggtcctccacctcctggtcaggttctgcct
cctcctctagctgggcctcctaatcgaggagatcgccctccaccaccagttctttttcct
ggacaaccttttgggcagcctccattgggtccacttcctcctggacctccacctccagtt
ccaggctacggcccccctcctggcccaccacctccacaacagggaccacctccacctcca
ggcccctttccacctcgtccacccggtccacttgggccaccccttacactagctcctcct
ccgcatcttcctggaccacctccaggtgccccaccgccagctccgcatgtgaacccagct
ttctttcctccaccaactaacagtggcatgcctacatcagatagccgaggtccaccacca
acagatccatatgggcgacctccaccatatgataggggtgactatggcccccctggaagg
gaaatggatactgcaagaacgccattgagtgaagctgaatttgaagaaatcatgaataga
aatagggcaatctcaagcagtgctatttcgagagctgtgtctgatgccagtgctggtgat
tatgggagtgccattgagacactggtaactgcaatttctttaattaaacaatccaaagta
tccgctgatgatcgttgcaaagttcttattagttctttgcaagattgccttcatggaatt
gagtccaagtcttatggttctggatcaagacgtgaacgatcaagagagagggaccatagt
agatcacgagaaaagagtcgacgtcataaatcccgtagtagagaccgtcatgacgattat
tatagagagagaagcagagaacgagagaggcaccgggatcgtgaccgagaccgtgaccga
gagcgtgaccgagagcgcgaatatcgtcatcgttag
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