Pan troglodytes (chimpanzee): 452130
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Entry
452130 CDS
T01005
Symbol
PLXNC1
Name
(RefSeq) plexin-C1 isoform X1
KO
K06572
plexin C
Organism
ptr
Pan troglodytes (chimpanzee)
Pathway
ptr04360
Axon guidance
Brite
KEGG Orthology (KO) [BR:
ptr00001
]
09150 Organismal Systems
09158 Development and regeneration
04360 Axon guidance
452130 (PLXNC1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04090 CD molecules [BR:
ptr04090
]
452130 (PLXNC1)
CD molecules [BR:
ptr04090
]
Proteins
452130 (PLXNC1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Plexin_cytopl
Plexin_RBD
PSI
TIG
Sema
PSI_integrin
Motif
Other DBs
NCBI-GeneID:
452130
NCBI-ProteinID:
XP_009424282
Ensembl:
ENSPTRG00000005301
VGNC:
5538
LinkDB
All DBs
Position
12:91784596..91943069
Genome browser
AA seq
1574 aa
AA seq
DB search
MEVSRRKAPPRPPRPAAPLPLLAYLLALAAPGRGADEPVWRSEQAIGAIAASQEDGVFVA
SGSCLDQLDYSLEHSLSRLYRDQAGNCTEPVSLAPPARPRPGSSFSKLLLPYREGAAGLG
GLLLTGWTFDRGACEVRPLGNLSRSSLRNGTEVVSCHPQGSTAGVVYRAGRNNRWYLAVA
ATYVLPEPETASRCNPAASDHDTAIALKDTEGRSLATQELGRLKLCEGAGSLHFVDAFLW
NGSIYFPYYPYNYTSGAATGWPSMARIAQSTEVLFQGQASLDCGHGHPDGRRLLLSSSLV
EALDVWAGVFSAAAGEGQERRSPTTTALCLFRMSEIQARAKRVSWDFKTAESHCKEGDQP
ERVQPIASSTLIHSDLTSVYGTVVMNRTVLFLGTGDGQLLKVILGENLTSNCPEVIYEIK
EETPVFYKLVPDPVKNIYIYLTAGKEVRRIRVANCNKHKSCSECLTATDPHCGWCHSLQR
CTFQGDCVHSENLENWLDISSGAKKCPKIQIIRSSKEKTTVTMVGSFSPRHSKCMVKNVD
SSRELCQNKSQPNRTCTCSIPTRATYKDVSVVNVMFSFGSWNLSDRFNFTNCSSLKECPA
CVETGCAWCKSARRCIHPFTACDPSDYERNQGCSPFQEQCPVAVEKTSGGGRPKENKGNR
TNQALQVFYIKSIEPQKVSTLGKSNVIVTGANFTRASNITMILKGTSTCDKDVIQVSHVL
NDTHMKFSLPSSRKEMKDVCIQFDGGNCSSVGSLSYIALPHCSLIFPATTWISGGQNITM
MGRNFDVIDNLIISHELKGNINVSEYCVATYCGFLAPSLKSSKVRTNVTVKLRVQDTYLD
CGTLQYLEDPRFTGYRVESEVDTELEVKIQKENDNFNISKKDIEITLFHGENGQLNCSFE
NITRNQDLTTILCKIKGIKTASTIANSSKKVRVKLGNLELYVEQESVPSTWYFLIVLPVL
LVIVIFAAVGVTRHKSKELSRKQSQQLELLESELRKEIRDGFAELQMDKLDVVDSFGTVP
FLDYKHFALRTFFPESGGFTHIFTEDMHNRDANDKNESLTALDALICNKSFLVTVIHTLE
KQKNFSVKDRCLFASFLTIALQTKLVYLTSILEVLTRDLMEQCSNMQPKLMLRRTESVVE
KLLTNWMSVCLSGFLRETVGEPFYLLVTTLNQKINKGPVDVITCKALYTLNEDWLLWQVP
EFSTVALNVVFEKIPENESADVCRNISVNVLDCDTIGQAKEKIFQAFLSKNGSPYGLQLN
EIGLELQVGTRQKELLDIDSSSVILEDGITKLNTIGHYEISNGSTIKVFKKIANFTSDVE
YSDDHCHLILPDSEAFQDVQGKRHRGKHKFKVKEMYLTKLLSTKVAIHSVLEKLFRSIWS
LPNSRAPFAIKYFFDFLDAQAENKKITDPDVVHIWKTNSLPLRFWVNILKNPQFVFDIKK
TPHIDGCLSVIAQAFMDAFSLTEQQLGKEAPTNKLLYAKDIPTYKEEVKSYYKAIRDLPP
LSSSEMEEFLTQESKKHENEFNEEVALTEIYKYIVKYFDEILNKLERERGLEEAQKQLLH
VKVLFDEKKKCKWM
NT seq
4725 nt
NT seq
+upstream
nt +downstream
nt
atggaggtctcccggaggaaggcgccgccgcgccccccgcgccccgcagcgccactgccc
ctgctcgcctatctgctggcactggcggctcccggccggggcgcggacgagcccgtgtgg
cggtcggagcaagccatcggagccatcgcggcgagccaggaggacggcgtgtttgtggcg
agcggcagctgcctggaccagctggactacagcctggagcacagcctctcgcgcctgtac
cgggaccaagcgggcaactgcacagagccggtctcgctggcgccccccgcgcggccccgg
cccgggagcagcttcagcaagctgctgctgccctaccgcgagggggcggccggcctcggg
gggctgctgctcaccggctggaccttcgaccggggcgcctgcgaggtgcggcccctgggc
aacctgagccgcagctccctgcgcaacggcaccgaggtggtgtcgtgccacccgcagggc
tcgacggccggcgtggtgtaccgcgcgggccggaacaaccgctggtacctggcggtggcc
gccacctacgtgctgcctgagccggagacggcgagccgctgcaaccccgcggcatccgac
cacgacacggccatcgcgctcaaggacacggaggggcgcagcctggccacgcaggagctg
ggccgcctcaagctgtgcgagggcgcgggcagcctgcacttcgtggacgcctttctctgg
aacggcagcatctacttcccctactacccctacaactacacgagcggcgctgccaccggc
tggcccagcatggcgcgtatcgcgcagagcaccgaggtgctgttccagggccaggcatcc
ctggactgcggccacggccaccccgacggccgccgcctgctcctctcctccagcctagtg
gaggccctggacgtctgggcgggagtgttcagcgcggccgctggagagggccaggagcgg
cgctcccccaccaccacggcgctctgcctcttcagaatgagtgagatccaggcgcgcgcc
aagagggtcagctgggacttcaagacggccgagagccactgcaaagaaggggatcaacct
gaaagagtccaaccaatcgcatcatctaccttgatccattccgacctgacatccgtttat
ggcaccgtggtaatgaacaggactgttttattcttggggactggagatggccagttactt
aaggttattcttggtgagaatttgacttcaaattgtccagaggttatctatgaaattaaa
gaagagacacctgttttctacaaactcgttcctgatcctgtgaagaatatctacatttat
ctaacagctgggaaagaggtgaggagaattcgtgttgcaaactgcaataaacataaatcc
tgttcggagtgtttaacagccacagaccctcactgcggttggtgccattcgctacaaagg
tgcacttttcaaggagattgtgtacattcagagaacttagaaaactggctggatatttcg
tctggagcaaaaaagtgccctaaaattcagataattcgaagcagtaaagaaaagactaca
gtgactatggtgggaagcttttctccaagacactcaaagtgcatggtgaagaatgtggac
tctagcagggagctctgccagaataaaagtcagcccaaccggacctgcacctgtagcatc
ccaaccagagcaacctacaaagatgtttcagttgtcaatgtgatgttctcctttggttct
tggaatttatcagacagattcaactttaccaactgctcatcattaaaagaatgcccagca
tgcgtagaaactggctgcgcgtggtgtaaaagtgcaagaaggtgtatccaccccttcaca
gcttgcgacccttctgattatgagagaaaccagggatgttctccattccaggaacagtgt
ccagtggctgtcgagaagacatcaggaggaggaagacccaaggagaacaaggggaacaga
accaaccaggctttacaggtcttctacattaagtccattgagccacagaaagtatcgaca
ttagggaaaagcaacgtgatagtaacgggagcaaactttacccgggcatcgaacatcaca
atgatcctgaaaggaaccagtacctgtgataaggatgtgatacaggttagccatgtgcta
aatgacacccacatgaaattctctcttccatcaagccggaaagaaatgaaggatgtgtgt
atccagtttgatggtgggaactgctcttctgtgggatccttatcctacattgccctgcca
cattgttcccttatatttcctgctaccacctggatcagtggtggtcaaaatataaccatg
atgggcagaaattttgatgtaattgacaacttaatcatttcacatgaattaaaaggaaac
ataaatgtctctgaatattgtgtggcgacttactgcgggtttttagcccccagtttaaag
agttcaaaagtgcgcacgaatgtcactgtgaagctgagagtacaagacacctacttggat
tgtggaaccctgcagtatctggaggaccccagattcacggggtatcgggtggaatccgag
gtggacacagaactggaagtgaaaattcaaaaagaaaatgacaacttcaacatttccaaa
aaagacattgaaattactctcttccatggggaaaatgggcaattaaattgcagttttgaa
aatattactagaaatcaagatcttaccaccatcctttgcaaaattaaaggcatcaagact
gcaagcaccattgccaactcttctaagaaagttcgggtcaagctgggaaacctggagctc
tacgtcgagcaggagtcagttccttccacgtggtattttctgattgtgctccctgtcttg
ctagtgattgtcatttttgcggccgtgggggtgaccaggcacaaatcgaaggagctgagt
cgcaaacagagtcaacaactagaattgctggaaagcgagctccggaaagagatacgtgat
ggctttgctgagctgcagatggataaattggatgtggttgatagttttggaactgttccc
ttccttgactacaaacattttgctctgagaactttcttccctgagtcaggtggcttcacc
cacatcttcactgaagatatgcataacagagacgccaacgacaagaatgaaagtctcaca
gctttggatgccctaatctgtaataaaagctttcttgttactgtcatccacacccttgaa
aagcagaagaacttttctgtgaaggacaggtgtctgtttgcctccttcctaaccattgca
ctgcaaaccaagctggtctacctgaccagcatcctagaggtgctgaccagggacttgatg
gaacagtgtagtaacatgcagccgaaactcatgctgagacgcacggagtccgtcgtcgaa
aaactcctcacaaactggatgtccgtctgcctttctggatttctgcgggagactgttgga
gagcccttctatttgctggtgacgactctgaaccagaaaattaacaagggtcccgtggat
gtaatcacttgcaaagccctgtacacacttaatgaagactggctgttgtggcaggttccg
gaattcagtactgtggcattaaacgtcgtctttgaaaaaatcccggaaaacgagagtgca
gatgtctgtcggaatatttcagtcaatgttctcgactgtgacaccattggccaagccaaa
gaaaagattttccaagcattcttaagcaaaaatggctctccttatggacttcagcttaat
gaaattggtcttgagcttcaagtgggcacacgacagaaagaacttctggacatcgacagt
tcctctgtgattcttgaagatggaatcaccaagctaaacaccattggccactatgagata
tcaaatggatccactataaaagtctttaagaagatagcaaattttacttcagatgtggaa
tactcggatgaccactgccatttgattttaccagattcggaagcattccaagatgtgcaa
ggaaagagacatcgagggaagcacaagttcaaagtaaaagaaatgtatctgacaaagctg
ctgtcgaccaaggtggcaattcattctgtgcttgaaaaactttttagaagcatttggagt
ttacccaacagcagagctccatttgctataaaatacttttttgactttttggacgcccag
gctgaaaacaaaaaaatcacagatcctgacgtcgtacatatttggaaaacaaacagcctt
cctcttcgcttctgggtaaacatcctgaagaaccctcagtttgtctttgacattaagaag
acaccacatatagacggctgtttgtcagtgattgcccaggcattcatggatgcattttct
ctcacagagcagcaactagggaaggaagcaccaactaataagcttctctatgccaaggat
atcccaacctacaaagaagaagtaaaatcttattacaaagcaatcagggatttgcctcca
ttgtcatcctcagaaatggaagaatttttaactcaggaatctaagaaacatgaaaatgaa
tttaatgaagaagtggccttgacagaaatttacaaatacatcgtaaaatattttgatgag
attctaaataaactagaaagagaacgagggctggaagaagctcagaaacaactcttgcat
gtaaaagtcttatttgatgaaaagaagaaatgcaagtggatgtaa
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integrated database retrieval system
