KEGG   Pan troglodytes (chimpanzee): 452247
Entry
452247            CDS       T01005                                 
Symbol
ATXN2
Name
(RefSeq) ataxin-2 isoform X3
  KO
K23625  ataxin-2
Organism
ptr  Pan troglodytes (chimpanzee)
Pathway
ptr05014  Amyotrophic lateral sclerosis
ptr05017  Spinocerebellar ataxia
ptr05022  Pathways of neurodegeneration - multiple diseases
Brite
KEGG Orthology (KO) [BR:ptr00001]
 09160 Human Diseases
  09164 Neurodegenerative disease
   05014 Amyotrophic lateral sclerosis
    452247 (ATXN2)
   05017 Spinocerebellar ataxia
    452247 (ATXN2)
   05022 Pathways of neurodegeneration - multiple diseases
    452247 (ATXN2)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:ptr03019]
    452247 (ATXN2)
Messenger RNA biogenesis [BR:ptr03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    Common to processing body (P body) and stress granule
     452247 (ATXN2)
SSDB
Motif
Pfam: SM-ATX LsmAD PAM2 LSM
Other DBs
NCBI-GeneID: 452247
NCBI-ProteinID: XP_016779715
Ensembl: ENSPTRG00000029540
VGNC: 4941
LinkDB
Position
10:complement(118265358..118412064)
AA seq 1220 aa
MSLKPQQQQQQQQQQQQQQQQQQQQQQQQQQPPPAAANVRKPGGSGLLASPAAAPSPSSS
SVSSSSATAPSSVVAATSGGGRPGLGRGRNSNKGLPQSTISFDGIYANMRMVHILTSVVG
SKCEVQVKNGGIYEGVFKTYSPKCDLVLDAAHEKSTESSSGPKREEIMESILFKCSDFVV
VQFKDMDSSYAKRDAFTDSAISAKVNGEHKEKDLEPWDAGELTANEELEALENDVSNGWD
PNDMFRYNEENYGVVSTYDSSLSSYTVPLERDNSEEFLKREARANQLAEEIESSAQYKAR
VALENDDRSEEEKYTAVQRNSSEREGHSINTRENKYIPPGQRNREVISWGSGRQNSPRMG
QPGSGSMPSRSTSHTSDFNPNSGSDQRVVNGGVPWPSPCPSPSSRPPSRYQSGPNSLPPR
AATPTRPPSRPPSRPSRPPSHPSAHGSPAPVSTMPKRMSSEGPPRMSPKAQRHPRNHRVS
AGRGSISSGLEFVSHNPPSEAATPPVARTSPSGGTWSSVVSGVPRLSPKTHRPRSPRQNS
IGNTPSGPVLASPQAGIIPTEAVAMPIPAASPTPASPASNRAVTPSSEAKDSRLQDQRQN
SPAGNKENIKPNETSPSFSKAENKGISPVVSEHRKQIDDLKKFKNDFRLQPSSTSESMDQ
LLNKNREGEKSRDLIKDKIEPSAKDSFIENSSSNCTSGSSKPNSPSISPSILSNTEHKRG
PEVTSQGVQTSSPACKQEKDDKEEKKDAAEQVRKSTLNPNAKEFNPRSFSQPKPSTTPTS
PRPQAQPSPSMVGHQQPTPVYTQPVCFAPNMMYPVPVSPGVQPLYPIPMTPMPVNQAKTY
RAGKVKYLELELLRYVPNMPQQRQDQHHQSAMMHPASAAGPPIAATPPAYSTQYVAYSPQ
QFPNQPLVQHVPHYQSQHPHVYSPVIQGNARMMAPPTHAQPGLVSSSATQYGAHEQTHAM
YACPKLPYNKETSPSFYFAISTGSLAQQYAHPNATLHPHTPHPQPSATPTGQQQSQHGGS
HPAPSPVQHHQHQAAQALHLASPQQQSAIYHAGLAPTPPSMTPASNTQSPQNSFPAAQQT
VFTIHPSHVQPAYTNPPHMAHVPQCASEALARCGLEMRLSWIYLSEGYLAHVQSGMVPSH
PTAHAPMMLMTTQPPGGPQAALAQSALQPIPVSTTAHFPYMTHPSGEACVCRGRRGTPKH
SARTGGMAGRASASSPAFEN
NT seq 3663 nt   +upstreamnt  +downstreamnt
atgtcgctgaagccccagcagcagcagcagcagcagcagcagcaacaacaacaacaacaa
cagcagcagcaacagcagcagcagcagcagcagccgccgcccgcggctgccaatgtccgc
aagcccggcggcagcggccttctagcgtcgcccgccgccgcgccttcgccgtcctcgtcc
tcggtctcctcgtcctcggccacggctccctcctcggtggtcgcggcgacctccggcggc
gggaggcccggcctgggcagaggtcgaaacagtaacaaaggactgcctcagtctacgatt
tcttttgatggaatctatgcaaatatgaggatggttcatatacttacatcagttgttggc
tccaaatgtgaagtacaagtgaaaaatggaggtatatatgaaggagtttttaaaacttac
agtccgaagtgtgatttggtacttgatgccgcacatgagaaaagtacagaatccagttcg
gggccgaaacgtgaagaaataatggagagtattttgttcaaatgttcagactttgttgtg
gtacagtttaaagatatggactccagttatgcaaaaagagatgcttttactgactctgct
atcagtgctaaagtgaatggcgaacacaaagagaaggacctggagccctgggatgcaggt
gaactcacagccaatgaggaacttgaggctttggaaaatgacgtatctaatggatgggat
cccaatgatatgtttcgatataatgaagaaaattatggtgtagtgtctacgtatgatagc
agtttatcttcgtatacagtgcccttagaaagagataactcagaagaatttttaaaacgg
gaagcaagggcaaaccagttagcagaagaaattgagtcaagtgcccagtacaaagctcga
gtggccctggaaaatgatgataggagtgaggaagaaaaatacacagcagttcagagaaat
tccagtgaacgtgaggggcacagcataaacactagggaaaataaatatattcctcctgga
caaagaaatagagaagtcatatcctggggaagtgggagacagaattcaccgcgtatgggc
cagcctggatcgggctccatgccatcaagatccacttctcacacttcagatttcaacccg
aattctggttcagaccaaagagtagttaatggaggtgttccctggccatcgccttgccca
tctccttcctctcgcccaccttctcgctaccagtcaggtcccaactctcttccacctcgg
gcagccacccctacacggccgccctccaggcccccctcgcggccatccagacccccgtct
cacccctctgctcatggttctccagctcctgtctctactatgcctaaacgcatgtcttca
gaagggcctccaaggatgtccccaaaggcccagcgacatcctcgaaatcacagagtttct
gctgggaggggttccatatccagtggcctagaatttgtatcccacaacccacccagtgaa
gcagctactcctccagtagcaaggaccagtccctcggggggaacgtggtcatcagtggtc
agtggggttccaagattatcccctaaaactcatagacccaggtctcccagacagaacagt
attggaaatacccccagtgggccagttcttgcttctccccaagctggtattattccaact
gaagctgttgccatgcctattccagctgcatctcctacgcctgctagtcctgcatcgaac
agagctgttaccccttctagtgaggctaaagattccaggcttcaagatcagaggcagaac
tctcctgcagggaataaagaaaatattaaacccaatgaaacatcacctagcttctcaaaa
gctgaaaacaaaggtatatcaccagttgtttctgaacatagaaaacagattgatgattta
aagaaatttaagaatgattttaggttacagccaagttctacttctgaatctatggatcaa
ctactaaacaaaaatagagagggagaaaaatcaagagatttgatcaaagacaaaattgaa
ccaagtgctaaggattctttcattgaaaatagcagcagcaactgtaccagtggcagcagc
aagccgaatagccccagcatttccccttcaatacttagtaacacggagcacaagagggga
cctgaggtcacttcccaaggggttcagacttccagcccagcatgtaaacaagagaaagat
gataaggaagagaagaaagacgcagctgagcaagttaggaaatcaacattgaatcccaat
gcaaaggagttcaacccacgttccttctctcagccaaagccttctactaccccaacttca
cctcggcctcaagcacaacctagcccatctatggtgggtcatcaacagccaactccagtt
tatactcagcctgtttgttttgcaccaaatatgatgtatccagtcccagtgagcccaggc
gtgcaacctttatacccaatacctatgacgcccatgccagtgaatcaagccaagacatat
agagcaggtaaagttaaatacctagaattggaattgctgaggtatgtaccaaatatgccc
caacagcggcaagaccagcatcatcagagtgccatgatgcacccagcgtcagcagcgggc
ccaccgattgcagccaccccaccagcttactccacgcaatatgttgcctacagtcctcag
cagttcccaaatcagccccttgttcagcatgtgccacattatcagtctcagcatcctcat
gtctatagtcctgtaatacagggtaatgctagaatgatggcaccaccaacacacgcccag
cctggtttagtatcttcttcggcaactcagtacggggctcatgagcagacgcatgcgatg
tatgcatgtcccaaattaccatacaacaaggagacaagcccttctttctactttgccatt
tccacgggctcccttgctcagcagtatgcgcaccctaacgctaccctgcacccacatact
ccacaccctcagccttcagctacccccactggacagcagcaaagccaacatggtggaagt
catcctgcacccagtcctgttcagcaccatcagcaccaggccgcccaggctctccatctg
gccagtccacagcagcagtcagccatttaccacgcggggcttgcgccaactccaccctcc
atgacacctgcctccaacacgcagtcgccacagaatagtttcccagcagcacaacagacc
gtctttacgatccatccttctcacgttcagccggcgtataccaacccaccccacatggcc
cacgtacctcagtgcgccagtgaggctctggcaaggtgtgggctagagatgcgactcagt
tggatctatctctcagaaggctaccttgctcatgtacagtcaggaatggttccttctcat
ccaactgcccatgcgccaatgatgctaatgacgacacagccacccggcggtccccaggcc
gccctcgctcaaagtgcactacagcccattccagtctcgacaacagcgcatttcccctat
atgacgcacccttcaggtgaggcgtgtgtgtgcaggggccgccggggcaccccaaagcat
tctgctcgcacaggtggaatggcaggcagggccagtgcttcaagccccgcatttgagaac
tag

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