Pan troglodytes (chimpanzee): 452590
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Entry
452590 CDS
T01005
Symbol
PCDH9
Name
(RefSeq) protocadherin-9 isoform X3
KO
K16498
protocadherin delta 1
Organism
ptr
Pan troglodytes (chimpanzee)
Pathway
ptr03273
Virion - Lassa virus and SFTS virus
Brite
KEGG Orthology (KO) [BR:
ptr00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03273 Virion - Lassa virus and SFTS virus
452590 (PCDH9)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
ptr01009
]
452590 (PCDH9)
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
ptr04515
]
452590 (PCDH9)
Protein phosphatases and associated proteins [BR:
ptr01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
452590 (PCDH9)
Cell adhesion molecules [BR:
ptr04515
]
Cadherins
Protocadherins
452590 (PCDH9)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Protocadherin
Cadherin_CELSR2_9th
Cadherin_2
Big_9
V_ATPase_I
RCR
EphA2_TM
DUF6249
DUF6377
MAP17
7tm_3
Motif
Other DBs
NCBI-GeneID:
452590
NCBI-ProteinID:
XP_001139410
Ensembl:
ENSPTRG00000005922
VGNC:
5092
UniProt:
A0A2I3TFU2
A0A6D2VXW0
LinkDB
All DBs
Position
14:complement(71966589..72883798)
Genome browser
AA seq
1203 aa
AA seq
DB search
MDLRDFYLLAALIACLRLDSAIAQELIYTIREELPENVPIGNIPKDLNISHINAATGTSA
SLVYRLVSKAGDAPLVKVSSSTGEIFTTSNRIDREKLCAGASYAEENECFFELEVVILPN
DFFRLIKIKIIVKDTNDNAPMFPSPVINISIPENTLINSRFPIPSATDPDTGFNGVQHYE
LLNGQSVFGLDIVETPEGEKWPQLIVQQNLDREQKDTYVMKIKVEDGGTPQKSSTAILQV
TVSDVNDNRPVFKEGQVEVHIPENAPIGTSVIQLHATDADIGSNAEIRYIFGAQVAPATK
RLFALNNTTGLITVQRSLDREETAIHKVTVLASDGSSTPARATVTINVTDVNDNPPNIDL
RYIISPINGTVYLSEKDPVNTKIALITVSDKDTDVNGKVICFIEREVPFHLKAVYDNQYL
LETSSLLDYEGTKEFSFKIVASDSGKPSLNQTALVRVKLEDENDNPPIFNQPVIELSVSE
NNRRGLYLTTISATDEDSGKNADIVYQLGPNASFFDLDRKTGVLTASRVFDREEQERFIF
TVTARDNGTPPLQSQAAVIVTVLDENDNSPKFTHNHFQFFVSENLPKYSTVGVITVTDAD
AGENKAVTLSILNDNDNFVLDPYSGVIKSNVSFDREQQSSYTFDVKATDGGQPPRSSTAK
VTINVMDVNDNSPVVISPPSNTSFKLVPLSAIPGSVVAEVFAVDVDTGMNAELKYTIVSG
NNKGLFRIDPVTGNITLEEKPAPTDVGLHRLVVNISDLGYPKSLHTLVLVFLYVNDTAGN
ASYIYDLIRRTMETPLDRNIGDSSQPYQNEDYLTIMIAIIAGAMVVIVVIFVTVLVRCRH
ASRFKAAQRSKQGAEWMSPNQENKQNKKKKRKKRKSPKSSLLNFVTIEESKPDDAVHEPI
NGTISLPAELEEQSIGRFDWGPAPPTTFKPNSPDLAKHYKSASPQPAFHLKPDTPVSVKK
HHVIQELPLDNTFVGGCDTLSKRSSTSSDHFSASECSSQGGFKTKGPLHTRQSQRRVTFH
LPDGSQESCSDSGLGDHEPVGSGTLISHPLPLVQPQDEFYDQASPDKRTEADGNSDPNSD
GPLGPRGLAEATEMCTQECLVLGHSDNCWMPPGLGPYPHPKSPLSTFAPQKEWVKKDKLV
NGHTLTRAWKEDSNRNQFNDRKQYGSNEGHFNNGSHMTDIPLANLKSYKQAGGATESPKE
HQL
NT seq
3612 nt
NT seq
+upstream
nt +downstream
nt
atggacctgagggatttttacctgttggctgctctgattgcctgtttaaggctggattcc
gcaatagctcaagaacttatttacactattagagaggaattgcctgaaaatgtgcccata
ggaaacataccaaaggatctgaacatttctcacatcaatgctgccacagggaccagcgcc
agccttgtctacagactggtttctaaagctggggatgcccctttggtgaaagtatccagc
agcactggggaaattttcacaacctccaacagaatagacagagaaaaactctgtgctggc
gcctcatatgctgaggagaatgagtgtttctttgaacttgaggtggtgatcctccccaat
gatttcttcaggctgatcaaaataaaaataattgtcaaggataccaatgataatgccccc
atgtttccatctcctgtcatcaatatttccattccagaaaacactttgatcaacagccgc
tttccaattccatcagcaacagatcctgacacaggcttcaatggtgtacagcattatgaa
ttgttaaatgggcagagtgtttttggactggatatcgtggaaactccagagggagagaag
tggccacaactgattgttcagcaaaacttggatagagaacagaaagatacgtatgtgatg
aaaatcaaagtagaggatggaggcactccacagaaatccagtacggccatactacaggtc
acagtaagtgatgtaaatgacaacaggccagtgtttaaagagggtcaagtggaggtgcat
attccagagaatgctcccataggtacctctgtaattcagctccatgccactgatgcagat
ataggcagtaatgctgaaatccggtacatttttggtgcccaggtcgcccctgcaaccaaa
agactctttgctttaaataatactactgggctgattacagttcagaggtccttagataga
gaggagacagccattcacaaagtgacagtgctggctagtgatggcagctccactcctgct
cgagcaacggttaccatcaatgtcaccgatgtaaatgataaccctcctaatatagacctc
aggtacattataagtcccatcaatggcaccgtgtatttatctgagaaagatcctgtcaat
acaaagattgccctaattacagtttcagataaggacacagatgtgaatggcaaagtgatc
tgttttattgaaagagaggtcccatttcatttgaaggcggtatatgacaaccaatatttg
ttagagacctcttctttgttggactatgagggcaccaaagaattcagctttaaaattgtt
gcctctgattctgggaagcccagtttaaatcagactgccctggtaagggttaagcttgag
gatgaaaatgacaacccaccaattttcaaccagcctgtaattgagctgtcagtttctgaa
aacaaccgacgtgggttatacttaacaactattagtgccacagatgaagacagtgggaaa
aatgcagacattgtttatcagcttggaccgaatgcctccttctttgatctggaccgaaaa
acaggagttttgacagcctccagagtctttgacagagaagaacaagaacgattcattttt
acagtaactgccagggacaatgggacccctcccctccaaagccaagcggctgtgattgtt
actgttttggatgagaatgacaatagccccaagtttactcataatcattttcaatttttt
gtgtctgagaatctgccaaagtatagtactgtgggggtaatcacagtgacagatgcagat
gctggagagaataaagctgtgactctttccattctaaatgacaatgataattttgtgttg
gatccctattctggagtcataaagtcaaatgtctcatttgatagagagcagcagagttcc
tacacttttgatgtcaaagccactgatggaggacaaccacctcgttcctctactgcaaaa
gtaactatcaacgtcatggatgtcaatgacaacagcccagttgtcatttctccaccgtct
aatacttcctttaagttggtgcccctctcagccattcctggctccgtggtagcagaagtt
tttgcagtggatgttgacactggaatgaacgctgaactaaagtatactatagtgagtgga
aacaataaaggcttatttcggattgatccagtaacaggtaacattactctggaagaaaaa
ccagcacctactgatgtgggattgcatcgtttggtggtcaacataagtgacctggggtac
cctaagtctttgcacacgcttgtgcttgtattcctttatgttaatgacactgctggaaat
gcctcctatatctatgacttgatccgcaggactatggagaccccgttggacaggaacata
ggggatagtagccaaccctatcaaaatgaggactatctaaccatcatgattgccatcatc
gccggtgccatggtggtcatcgttgtgatcttcgtcaccgttctggtgcgctgtcgccat
gcatcaaggttcaaagcagctcagaggagcaagcaaggtgccgaatggatgtccccaaac
caggagaacaagcaaaacaagaaaaagaaaagaaagaaaaggaagtctcccaaaagctct
cttttgaactttgttactatcgaagagtccaaacccgatgatgcagttcatgaacctatc
aatgggacaataagcctgccggctgaactggaggagcaaagtataggaagatttgactgg
ggcccggcacctccaacaacattcaagcctaacagtcctgacctggccaagcactacaaa
tctgcttctccacagcctgcttttcatctcaaaccagacactccagtttccgtgaaaaag
caccacgtgattcaggaactccctttggacaacacctttgtcggaggttgtgacaccctt
tctaaacgctcttccactagttcagatcacttcagtgcctcagagtgcagttcccaagga
ggcttcaagacaaagggccccttacacaccagacagtcgcagcgccgtgttacgtttcac
ctccctgatggctcccaggaaagctgcagtgacagtggtctaggagaccatgagccggtg
ggtagtggaaccctgatctcacaccctcttcctctggttcagccacaggacgaattctat
gaccaggcctctccggacaagaggaccgaagcagatggcaactctgatcccaactctgat
gggcctttgggtccccgaggattagctgaagctacagagatgtgcactcaagagtgcttg
gttttgggtcactctgataattgctggatgcctcctggcttgggtccatatccacacccc
aaatctcctctctcaacctttgcaccccagaaagaatgggtgaagaaggacaagcttgtg
aatgggcacaccctgaccagagcctggaaagaagacagcaacaggaaccagttcaatgac
cgtaagcagtatggctccaatgaaggccatttcaacaatggcagccacatgacagacatt
cctctggcaaatctgaagtcttataagcaagcaggaggtgcaactgagagtcctaaggag
caccaactctaa
DBGET
integrated database retrieval system
