Entry |
|
Symbol |
LMO7
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Name |
(RefSeq) LIM domain only protein 7 isoform X39
|
KO |
|
Organism |
ptr Pan troglodytes (chimpanzee)
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Pathway |
|
Brite |
KEGG Orthology (KO) [BR:ptr00001]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04520 Adherens junction
452604 (LMO7)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:ptr04121]
452604 (LMO7)
Ubiquitin system [BR:ptr04121]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
452604 (LMO7)
|
SSDB |
|
Motif |
|
Other DBs |
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LinkDB |
|
Position |
14:81236241..81546601
|
AA seq |
1349 aa
MKKIRICHIFTFYSWMSYDVLFQRTELGALEIWRQLICAHVCICVGWLYLRDRVCSKKDI
ILRTEQNSGRTILIKAVTEKNFETKDFRASLENGVLLCDLINKLKPGVIKKINRLSTPIA
GLDNINVFLKACEQIGLKEAQLFHPGDLQDLSNRVTVKQEETDRRVKNVLITLYWLGRKA
QSNPYYNGPHLNLKAFENLLGQALTKALEDSSFLKRSGRDSGYGDIWCPERGEFLAPPRH
HKREDSFESLDSLGSRSLTSCSSDITLRGGREGFESDTDSEFTFKMQDYNKDDMSYRRIS
AVEPKTALPFNRFLPNKSRQPSYVPAPLRKKKPDKHEDNRRSWASPVYTEADGTFSRLFQ
KIYGENGSKSMSDVSAEDVQNLRQLRYEEMQKIKSQLKEQDQKWQDDLAKWKDRRKSYTS
DLQKKKEEREEIEKQALEKSERSSKTFKEMLQDRESQNQKSTVPSRRRMYSFDDVLEEGK
RPPTMTVSEASYQSERVEEKGATYPSEIPKEDSTTFAKREDRVTTEIQLPSQSPVEEQSP
ASLSSLRSRSTQMESTRVSASLPRSYQKTDTVRLTSVVTPRPFGSQTRGISSLPRSYTMD
DAWKYNGDVEDIKRTPNNVVSTPAPSPDASQLASSLSSQKEVAATEEDVTRLPSPTSPFS
SLSQDQAATSKATLSSTSGLDLMSESGEGEISPQREVSRSQDQFSDMRISINQTPGKSLD
FGFTIKWDIPGIFVASVEAGSPAEFSQLQVDDEIIAINNTKFSYNDSKEWEEAMAKAQET
GHLVMDVRRYGKAGSPETKWIDATSGIYNSEKSSNLSVTTDFSESLQSSNIESKEINGIH
DESNAFESKASESISLKNLKRRSQFFEQGSSDSVVPDLPVPTISAPSRWVWDQEEERKRQ
ERWQKEQDRLLQEKYQREQEKLREEWQRAKQEAERENSKYLDEELMVLSSNSMSLTTREP
SLATWEATWSEGSKSSDREGTRAGEEERRQPQEEVVHEDQGKKPQDQLVIQRERKWEQQL
QEEQEQKRLQAEAEEQKRPAEEQKRQAEIERETSVRIYQYRRPVDSYDIPKTEEASSGFL
PGDRNKSRSTTELDDYSTNKNGNNKYLDQIGNMTSSQRRSKKEQVPSGAELERQQILQEM
RKRTPLHNDNSWIRQRSASVNKEPVSLPGIMRRGESLDNLDSPRSNSWRQPPWLNQPTGF
YASSSVQDFSRPPPQLVSTSNRAYMRNPSSSVPPPSAGSVKTSTTGVATTQSPTPRSHSP
SASQSGSQLRNRSVSGKRICSYCNNILGKGAAMIIESLGLCYHLHCFKCVACECDLGGSS
SGAEVRIRNHQLYCNDCYLRFKSGRPTAM |
NT seq |
4050 nt +upstreamnt +downstreamnt
atgaagaaaattaggatatgccatattttcacgttttacagttggatgtcctatgatgtt
ctcttccagagaacagagctcggagctctggaaatttggaggcaactgatatgtgctcat
gtctgcatctgtgtgggttggctgtatctcagggacagagtctgcagcaaaaaagatata
attttgaggactgaacaaaattcaggaaggactattctcattaaggcagtaacagagaag
aattttgaaacaaaagattttcgagcctctctagaaaacggtgttctgctgtgtgatttg
attaataagcttaaacctggcgtcattaagaagatcaatagactgtctacaccaatagca
ggattggataatataaacgttttcttgaaagcttgtgaacagattggattgaaagaagcc
cagcttttccatcctggagatctacaggatttatcaaatcgagtcactgtcaagcaagaa
gagactgacaggagagtgaaaaatgttttgataacattgtactggctgggaagaaaagca
caaagcaacccgtactataatggtccccatcttaatttgaaagcgtttgagaatctttta
ggacaagcactgacgaaggcactcgaagactccagcttcctgaaaagaagtggcagggac
agtggctacggtgacatctggtgtcctgaacgtggagaatttcttgctcctccaaggcac
cataagagagaagattcctttgaaagcttggactctttgggctcaaggtcattgacaagc
tgctcctctgatatcacgttgagaggggggcgtgaaggttttgaaagtgacacagattcg
gaatttacattcaagatgcaggattataataaagatgatatgtcgtatcgaaggatttcg
gctgttgagccaaagactgcgttacccttcaatcgttttttacccaacaaaagtagacag
ccatcctatgtaccagcacctctgagaaagaaaaagccagacaaacatgaggataacaga
agaagttgggcaagcccggtttatacagaagcagatggaacattttcaagactctttcaa
aagatttatggtgagaatgggagtaagtccatgagtgatgtcagcgcagaagatgttcaa
aacttgcgtcagctgcgttacgaggagatgcagaaaataaaatcacaattaaaagaacaa
gatcagaaatggcaggatgaccttgcaaaatggaaagatcgtcgaaaaagttacacttca
gatctgcagaagaaaaaagaagagagagaagaaattgaaaagcaggcacttgagaagtct
gagagaagctctaagacgtttaaggaaatgctgcaggacagggaatcccaaaatcaaaag
tctacagttccgtcgagaaggagaatgtattcttttgatgatgtgctggaggaaggaaag
cgaccccctacaatgactgtgtcagaagcaagttaccagagtgagagagtagaagagaag
ggagcaacttatccttcagaaattcccaaagaagattctaccacttttgcaaaaagagag
gaccgtgtaacaactgaaattcagcttccttctcaaagtcctgtggaagaacaaagccca
gcctctttgtcttctctgcgttcacggagcacacaaatggaatcaactcgtgtttcagct
tctctccccagaagttaccagaaaactgatacagtcaggttaacatctgtggtcacacca
agaccttttggctctcagacaaggggaatctcatcactccccagatcttacacgatggat
gatgcttggaagtataatggagatgttgaagacattaagagaactccaaacaatgtggtc
agcacccctgcaccaagcccagacgcaagccaactggcttcaagcttatctagccagaaa
gaggtagcagcaacagaagaagatgtgacaaggctgccctctcctacatcccccttctca
tctctttcccaagaccaggctgccacttctaaagccacattgtcttccacatctggtctt
gatttaatgtctgaatctggagaaggggaaatctccccacaaagagaagtctcaagatcc
caggatcagttcagtgatatgagaatcagcataaaccagacgcctgggaagagtcttgac
tttgggtttacaataaaatgggatattcctgggatcttcgtagcatcagttgaagcaggt
agcccagcagaattttctcagctacaagtagatgatgaaattattgctattaacaacacc
aagttttcatataacgattcaaaagagtgggaggaagccatggctaaggctcaagaaact
ggacacctagtgatggatgtgaggcgctatggaaaggctggttcacctgaaacaaagtgg
attgatgcaacttctggaatttacaactcagaaaaatcttcaaatctatctgtaacaact
gatttctccgaaagccttcagagttctaatattgaatccaaagaaatcaatggaattcat
gatgaaagcaatgcttttgaatcaaaagcatctgaatccatttctttgaaaaacttaaaa
aggcgatcacaattttttgaacaaggaagctctgattcggtggttcctgatcttccagtt
ccaaccatcagtgccccgagtcgctgggtgtgggatcaagaggaggagcggaagcggcag
gagaggtggcagaaggagcaggaccgcctactgcaggaaaaatatcaacgtgagcaggag
aaactgagggaagagtggcaaagggccaaacaggaggcagagagagagaattccaagtac
ttggatgaggaactgatggtcctaagctcaaacagcatgtctctgaccacacgggagccc
tctcttgccacctgggaagctacctggagtgaagggtccaagtcttcagacagggaagga
acccgagcaggagaagaggagaggagacagccgcaagaggaagttgttcatgaggaccaa
ggaaagaagccgcaggatcagcttgttattcagagagagaggaaatgggagcaacagctt
caggaagagcaagagcagaagcggcttcaggctgaggctgaggagcagaagcgtcctgcg
gaggagcagaagcgccaggcagagatagagcgggaaacatcagtcagaatataccagtac
aggaggcctgttgattcctatgatataccaaagacagaagaagcatcttcaggttttctt
cctggtgacaggaataaatccagatctactactgaactggatgattactccacaaataaa
aatggaaacaataaatatttagaccaaattgggaacatgacctcttcacagaggagatcc
aagaaagaacaagtaccatcaggagcagaattggagaggcaacaaatccttcaggaaatg
aggaagagaacaccccttcacaatgacaacagctggatccgacagcgcagtgccagtgtc
aacaaagagcctgttagtcttcctgggatcatgagaagaggcgaatctttagataacctg
gactccccccgatccaattcttggagacagcctccttggctcaatcagcccacaggattc
tatgcttcttcctccgtgcaagactttagtcgcccaccacctcagctggtgtccacatca
aaccgtgcctacatgcggaacccctcctccagcgtgcccccgccttcagctggctccgtg
aagacttccaccacaggtgtggccaccacacagtcccccaccccgagaagccattcccct
tcagcttcacagtcaggctctcagctgcgtaacaggtcagtcagtgggaagcgcatatgc
tcctactgcaataacattctgggcaaaggagccgccatgatcatcgagtccctgggtctt
tgttatcatttgcattgttttaagtgtgttgcctgtgagtgtgacctcggaggctcttcc
tcaggagctgaagtcaggatcagaaaccaccaactgtactgcaacgactgctatctcaga
ttcaaatctggacggccaaccgccatgtga |