Pan troglodytes (chimpanzee): 452661
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Entry
452661 CDS
T01005
Symbol
COL4A2
Name
(RefSeq) collagen alpha-2(IV) chain isoform X2
KO
K06237
collagen type IV alpha
Organism
ptr
Pan troglodytes (chimpanzee)
Pathway
ptr04151
PI3K-Akt signaling pathway
ptr04510
Focal adhesion
ptr04512
ECM-receptor interaction
ptr04820
Cytoskeleton in muscle cells
ptr04926
Relaxin signaling pathway
ptr04933
AGE-RAGE signaling pathway in diabetic complications
ptr04974
Protein digestion and absorption
ptr05146
Amoebiasis
ptr05165
Human papillomavirus infection
ptr05200
Pathways in cancer
ptr05222
Small cell lung cancer
Brite
KEGG Orthology (KO) [BR:
ptr00001
]
09130 Environmental Information Processing
09132 Signal transduction
04151 PI3K-Akt signaling pathway
452661 (COL4A2)
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
452661 (COL4A2)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
452661 (COL4A2)
09142 Cell motility
04820 Cytoskeleton in muscle cells
452661 (COL4A2)
09150 Organismal Systems
09152 Endocrine system
04926 Relaxin signaling pathway
452661 (COL4A2)
09154 Digestive system
04974 Protein digestion and absorption
452661 (COL4A2)
09160 Human Diseases
09161 Cancer: overview
05200 Pathways in cancer
452661 (COL4A2)
09162 Cancer: specific types
05222 Small cell lung cancer
452661 (COL4A2)
09172 Infectious disease: viral
05165 Human papillomavirus infection
452661 (COL4A2)
09174 Infectious disease: parasitic
05146 Amoebiasis
452661 (COL4A2)
09167 Endocrine and metabolic disease
04933 AGE-RAGE signaling pathway in diabetic complications
452661 (COL4A2)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ptr04147
]
452661 (COL4A2)
00536 Glycosaminoglycan binding proteins [BR:
ptr00536
]
452661 (COL4A2)
Exosome [BR:
ptr04147
]
Exosomal proteins
Exosomal proteins of other cancer cells
452661 (COL4A2)
Glycosaminoglycan binding proteins [BR:
ptr00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
452661 (COL4A2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Collagen
C4
Motif
Other DBs
NCBI-GeneID:
452661
NCBI-ProteinID:
XP_001136859
Ensembl:
ENSPTRG00000006032
VGNC:
10710
UniProt:
K7C8W0
A0A6D2WRG6
LinkDB
All DBs
Position
13:91570720..91779031
Genome browser
AA seq
1711 aa
AA seq
DB search
MGRDQRAVAGPALRRWLLGTVTVGFLAQSVLAGVKKFDVPCGGRDCSGGCQCYPEKGGRG
QPGPVGPQGYNGPPGLQGFPGLQGRKGDKGERGAPGITGPKGDVGARGVSGFPGADGIPG
HPGQGGPRGRPGYDGCNGTQGDSGPQGPPGSEGFTGPPGPQGPKGQKGEPYALPKEERDR
YRGEPGEPGLVGFQGPPGRPGHVGQMGPVGAPGRPGPPGPPGPKGQQGNRGLGFYGVKGE
KGDVGQPGPNGIPSDLLHPIIAPTGVTFHPDQYKGEKGSEGEPGIRGISLKGEEGIMGFP
GLRGYPGLSGEKGSPGQKGSRGLDGYQGPDGPRGPKGEAGDPGPPGLPAYSPHPSLAKGA
RGDPGFPGAQGEPGSQGEPGDPGLPGAPGLSIGDGDQRRGLPGEMGPKGFIGDPGIPALY
GGPPGPDGKRGPPGPPGLPGPPGPDGFLFGLKGAKGRAGFPGLPGSPGARGPKGWKGDAG
ECRCTEGDEAIKGLPGLPGPKGFAGINGEPGRKGDKGDPGQHGLPGFPGLKGVPGNVGAP
GPKGAKGDSRTITTKGERGQPGVPGVPGMKGDDGSPGRDGLDGFPGLPGPPGDGIKGPPG
DPGYPGIPGTKGTPGEMGPPGLGLPGLKGQRGFPGDAGLPGPPGFLGPPGPAGTPGQIDC
DTDVKRAIGGDRQEAIQPGCVGGPKGLPGLPGPPGPTGAKGLRGIPGFSGADGGPGPKGL
PGDAGREGFPGPPGFIGPRGSKGAVGLPGPDGSPGPIGLPGPDGPPGERGLPGEVLGAQP
GPRGDAGVPGQPGLKGLPGDRGPPGFRGSQGMPGMPGLKGQPGLPGPSGQPGLYGPPGLH
GFPGAPGQEGPLGLPGIPGREGLPGDRGDPGDTGAPGPVGMKGLSGDRGDAGFTGERGHP
GSPGFKGIDGMPGTPGLKGDRGSPGMDGFQGMPGLKGRPGFPGSKGEAGFFGIPGLKGLA
GEPGFKGSRGDPGPPGPPPVILPGMKDIKGEKGDEGPMGLKGYLGAKGIQGMPGIPGLSG
IPGLPGRPGHIKGVKGDIGAPGIPGLPGFPGVAGPPGITGFPGFIGSRGDKGAPGRAGLY
GEIGATGDFGDIGDTINLPGRPGLKGERGTTGIPGLKGFFGEKGTEGDIGFPGITGVTGV
QGPPGLKGQTGFPGLTGPPGSQGEPGRIGLPGGKGDDGWPGAPGLPGFPGLRGIRGLHGL
PGTKGFPGSPGSDIHGDPGFPGPPGERGDPGEANTLPGPVGVPGQKGDQGAPGERGPPGS
PGLQGFPGITPPSNISGAPGDKGAPGIFGLKGYRGPPGPPGSAALPGSKGDTGNPGAPGT
PGTKGWAGDSGPQGRPGVFGLPGEKGPRGEQGFMGNTGPTGAVGDRGPKGPKGDPGFPGA
PGTVGAPGIAGIPQKIAVQPGTVGPQGRRGPPGAPGEMGPQGPPGEPGFRGAPGKAGPQG
RGGVSAVPGFRGDEGPIGHQGPIGQEGAPGRPGSPGLPGMPGRSVSIGYLLVKHSQTDQE
PMCPVGMNKLWSGYSLLYFEGQEKAHNQDLGLAGSCLARFSTMPFLYCNPGDVCYYASRN
DKSYWLSTTAPLPMMPVAEDEIKPYISRCSVCEAPAVAIAVHSQDVSIPHCPAGWRSLWI
GYSFLMHTAAGDEGGGQSLVSPGSCLEDFRATPFIECNGGRGTCHYYANKYSFWLTTIPE
QSFQGSPSADTLKAGLIRTHISRCQVCMKNL
NT seq
5136 nt
NT seq
+upstream
nt +downstream
nt
atggggagagaccagcgcgcggtggccggccctgccctacggcggtggctgctggggaca
gtgaccgtggggttcctcgcccagagcgtcttggcgggtgtgaagaagtttgatgtgccg
tgtggaggaagagattgcagtgggggctgccagtgctaccctgagaaaggtggacgtggt
cagcctgggccagtgggcccccaggggtacaatgggccaccaggattacaaggattcccg
ggactgcagggacgcaaaggagacaagggtgaaaggggagcccccggaataacaggaccc
aagggcgacgtgggagcaagaggcgtttctggattccctggtgccgatggaattcctgga
cacccggggcaaggtgggcccaggggaaggcccggctacgatggctgcaacggaacccag
ggagactcaggtccacaggggccccccggctctgaggggttcaccgggcctcccgggccc
caaggaccaaaagggcagaaaggtgagccttatgcactgcctaaagaggaacgcgacaga
tatcggggtgaacctggagagcctggattggtcggtttccagggacctcccggccgccct
gggcatgtgggacagatgggtccagttggagctccagggagaccaggaccacccggaccc
cctggaccaaaaggacagcaaggcaacagaggacttggtttctacggagttaagggtgaa
aagggtgacgtagggcagccgggacccaacgggattccatcagacctcctccaccccatc
atcgcgcccacgggagtcaccttccacccagatcagtacaagggtgaaaaaggcagtgag
ggggaaccaggaataagaggcatttccttgaagggagaagaaggaatcatgggctttcct
ggactgaggggttaccctggcttgagtggtgaaaaaggatcaccaggacagaagggaagc
cgaggcctggatggctatcaagggcctgatggaccccggggacccaagggagaagccgga
gacccagggccccctggactacctgcctactcccctcacccttccctagcaaaaggtgcc
agaggtgacccgggattcccaggggcccaaggggagccaggaagccagggtgagccagga
gacccgggcctcccaggtgcccctggcctctccatcggagatggagatcagaggagaggc
ctgccgggtgagatgggacccaagggcttcatcggagaccccggcatccctgcgctctac
gggggcccacctggacctgatggaaagcgagggcctccaggaccccccgggctccctgga
ccacctggacctgatggcttcctgtttgggctgaaaggagcaaaaggaagagcaggcttc
cctgggcttcccggctcccctggagcccgcggaccaaaggggtggaaaggtgacgctggg
gaatgcagatgtacagaaggcgacgaagctatcaaaggtcttccgggactgccaggaccc
aagggcttcgcaggcatcaacggggagccggggaggaaaggggacaaaggagaccccggc
caacacggcctccctgggttcccagggctcaagggagtgcctggcaacgttggtgctccc
ggacccaaaggagcaaaaggagattccagaacaatcacaaccaaaggtgagcggggacag
cccggcgtcccaggtgtgcccgggatgaaaggtgacgatggcagcccaggccgcgatggg
ctcgatggattccccggcctcccaggccctcccggcgatggcatcaagggccctccaggg
gacccaggctatccaggaatacctggaacgaagggtactccaggagaaatgggcccccca
ggactgggccttcccggcctcaaaggccaacgtggtttccctggagacgccggcttacct
ggaccaccaggcttcctgggccctcctggccccgcagggaccccaggacaaatagattgt
gacacagatgtgaaaagggccattggaggtgacagacaggaggccatccagccaggttgc
gtaggagggcccaagggattgccaggcctgccaggacccccaggccccacaggtgccaaa
ggcctccgaggaatcccaggcttctcaggagctgatggaggaccagggcccaagggcttg
ccaggagacgcaggtcgtgaagggttcccaggacccccagggttcataggaccccgagga
tccaaaggtgcagtgggcctccctggcccagatggatccccaggtcccatcggcctgcca
gggccagatgggccccctggggaaaggggcctccctggagaagtcctgggagcccagccc
gggccacggggagatgctggtgtgcctggacagcctgggcttaaaggccttcccggagac
agaggcccccctggattcagaggaagccaagggatgcctgggatgccagggctgaagggc
cagccaggcctcccaggaccttccggccagccaggcctgtacgggcctccaggactgcat
ggattcccaggagctcctggccaagaggggcccttggggctgccaggaatcccaggccgt
gaaggtctgcctggtgatagaggggaccctggggacacaggcgctcctggccctgtgggc
atgaaaggtctctctggtgacagaggagatgctggcttcacaggggagcgaggccatcca
ggaagccctggatttaaaggaattgatggaatgcctgggacccccgggctaaaaggagat
agaggctcacctgggatggatggtttccaaggcatgcctggactcaaagggagacccggg
tttccagggagcaaaggcgaggctggatttttcggaatacccggtctgaagggtctggct
ggtgagccaggttttaaaggcagccgaggggaccctgggcccccaggaccacctcctgtc
atcctgccaggaatgaaagacattaaaggagagaaaggagatgaagggcctatggggctg
aaaggatacctgggcgcaaaaggtatccaaggaatgccaggcatcccagggctgtcagga
atccctgggctgcctgggaggcccggccacatcaaaggagtcaagggagacatcggagcc
cccggcatccccggtttgccaggattccctggggtggctggcccccctggaattacggga
ttcccaggattcataggaagccggggtgacaaaggtgccccagggagagcaggcctgtat
ggcgagattggcgcgactggtgatttcggtgacatcggggacactataaatttaccagga
agaccaggcctgaagggggagcggggcaccactggaataccaggtctgaagggattcttt
ggagagaagggaacagaaggtgacatcggcttccctgggataacaggcgtgactggagtc
caaggccctcctggacttaaaggacaaacaggctttccagggctgactgggcctccaggg
tcgcagggagagccggggcggattgggctgcctggtggcaaaggagatgatggctggccg
ggagctccgggcttaccaggttttccgggactccgtgggatccgcggcttacacggcttg
ccaggcaccaagggctttccaggatccccaggttctgacatccacggagacccaggcttc
ccaggccctcctggggaaagaggtgacccaggagaggccaacacccttccaggccctgtg
ggagtcccaggacagaaaggagaccaaggagctccaggggaacgaggcccacctgggagt
ccaggacttcaggggttccctggcatcacacccccttccaacatctctggggcacctggt
gacaaaggggcgccagggatatttggcctgaaaggttatcggggcccaccagggccacca
gggtctgctgctcttcctggaagcaaaggtgacacagggaacccaggagctccaggaacc
ccagggaccaaaggatgggccggggactccgggccccagggcaggcctggtgtgttcggt
ctcccaggagaaaaagggcctaggggtgaacaaggcttcatggggaacactggacccacc
ggggcggtgggcgacagaggccccaagggacccaagggagacccaggattccctggtgcc
cccgggactgtgggagcccctgggattgcaggaatcccccagaagattgccgtccaacca
gggacagtgggtccccaggggaggcgaggcccccctggggcaccgggggagatggggccc
cagggcccccccggagaaccaggtttccgtggggctccagggaaagctgggccccaagga
agaggtggtgtgtctgctgttcccggcttccggggagatgaaggacccataggccaccag
gggccgattggccaagaaggtgcaccaggccgtccagggagcccgggcctgccgggtatg
ccaggccgcagcgtcagcatcggctacctcctggtgaagcacagccagacggaccaggag
cccatgtgcccggtgggcatgaacaagctctggagtggatacagcctgctgtacttcgag
ggccaggagaaggcgcacaaccaggacctggggctggcgggctcctgcctggcgcggttc
agcaccatgcccttcctgtactgcaaccctggtgatgtctgctactatgccagccggaac
gacaagtcctactggctctctaccactgcgccgctgcccatgatgcctgtggccgaggac
gagatcaagccctacatcagccgctgctctgtgtgtgaggccccagctgtcgccatcgcg
gtccacagtcaggatgtctccatcccacactgcccagctgggtggcggagtttgtggatc
ggatattccttcctcatgcacacggcggcgggagacgaaggcggtggccagtcactggtg
tcaccgggcagctgtctagaggacttccgcgccacaccattcatcgagtgcaatggaggc
cgcggcacctgccactactacgccaacaagtacagcttctggctgaccaccattcccgag
cagagcttccagggctcgccctccgccgacacgctcaaggccggcctcatccgcacacac
atcagccgctgccaggtgtgcatgaagaacctgtga
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