Pan troglodytes (chimpanzee): 452689
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Entry
452689 CDS
T01005
Symbol
UPF3A
Name
(RefSeq) regulator of nonsense transcripts 3A isoform X1
KO
K14328
regulator of nonsense transcripts 3
Organism
ptr
Pan troglodytes (chimpanzee)
Pathway
ptr03013
Nucleocytoplasmic transport
ptr03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
ptr00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
452689 (UPF3A)
03015 mRNA surveillance pathway
452689 (UPF3A)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ptr03019
]
452689 (UPF3A)
Messenger RNA biogenesis [BR:
ptr03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Surveillance complex
452689 (UPF3A)
mRNA cycle factors
P-body specific factors
452689 (UPF3A)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Smg4_UPF3
Motif
Other DBs
NCBI-GeneID:
452689
NCBI-ProteinID:
XP_016781121
Ensembl:
ENSPTRG00000006073
VGNC:
51886
UniProt:
A0A2I3RWI0
LinkDB
All DBs
Position
14:119897184..119931442
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AA seq
476 aa
AA seq
DB search
MRSEKEGAGGLRAAVAARGPSGREKLSALEVQFHRDSQQQEAETAPTSSSGCGGGAGKPR
EEKRTALSKVVIRRLPPGLTKEQLEEQLRPLPAHDYFEFFAADLSLYPHLYSRAYINFRN
PDDILLFRDRFDGYIFLDSKGLEYPAVVEFAPFQKIAKKKLRKKDAKTGSIEDDPEYKKF
LETYWVEEEKTSANPETLLGEMEAKTRELIARRTTPLLEYIKNRKLEKQRIREEKREERR
RRELEKKRLREEEKRRRREEERCRKKETDKQKKIAEKEVRIKLLKKPEKGEEPITEKPKE
RGEEIDTGGGKQESCAPGAVVKARPVEGSLEEPQETSHSGSDKEHRDVERSQEQESEAQR
HHVDDGRRHRAHHGPERLSRRSEDEQRWGKGPGQDRGKKGSQDSGAPGEAMERLGRAQRC
DDSPAPRKERLANKDRPALQLYDPGARFRARECGGNRRICKAEGSGTGPEKREEAE
NT seq
1431 nt
NT seq
+upstream
nt +downstream
nt
atgcgctcggaaaaggagggggccggaggccttagggcggccgttgccgcgcggggcccg
agcgggagggagaagctgtcggccctagaagtgcagttccaccgcgactcgcagcagcag
gaggctgagacggcgccaacctcgtcctccggttgcgggggcggtgcgggcaaacctcgc
gaggagaagaggacggccctgagcaaggtggtcatccgccgcctgcctccgggcctcacc
aaggagcagctggaggagcagctgcgcccgctgccagcacacgactacttcgagttcttc
gccgccgacctgagtctttatcctcatctctactcaagagcatacattaattttaggaat
cctgatgacatccttctttttagagatcgttttgatggatatatcttccttgacagcaaa
ggcctagaatatcctgcagtggtagagtttgctccattccagaagatagccaaaaagaag
ctgagaaaaaaagatgccaagactggaagcatcgaagatgatccagaatataagaagttt
ttagaaacctactgggtggaggaagagaagaccagtgccaaccctgagactctgctgggg
gagatggaggcgaagacaagagagctcattgctagaagaaccacacctcttttggaatat
attaaaaatagaaaattagaaaagcagagaattcgagaagagaagcgagaagaacggagg
aggagagagttagaaaagaaacgtttgcgggaagaggaaaaaagaagaagaagagaagaa
gaaagatgcagaaaaaaagagacagataaacagaagaaaattgcagagaaagaagtgagg
attaagcttcttaagaaaccagaaaagggagaggaaccaatcacagagaaaccaaaggaa
agaggagaggagattgatactggaggtggcaagcaggaatcctgtgcccccggtgcagtc
gtaaaagccaggcccgtggaaggctcgctggaggagccccaggagacgtcacacagcggc
agtgataaagagcacagggatgtggagagatctcaagaacaagaatctgaagcacaaaga
caccatgtggatgacggcaggaggcacagagctcaccacgggcctgaacggctttccaga
aggagtgaggatgagcagagatgggggaaaggacctggccaagacagagggaagaagggg
agccaggacagcggggctccaggggaggccatggagagactgggaagagcgcagaggtgt
gacgacagtccagcacccagaaaagagcgactggcaaacaaggaccggccagccttgcag
ctgtatgatccaggagctcgcttccgagcgcgagagtgtggcggaaacaggaggatctgc
aaggcagaaggttcggggactggtcctgagaagagggaagaggcagagtga
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