Pan troglodytes (chimpanzee): 453358
Help
Entry
453358 CDS
T01005
Symbol
VPS39
Name
(RefSeq) vam6/Vps39-like protein isoform X1
KO
K20183
Vam6/Vps39-like protein vacuolar protein sorting-associated protein 39
Organism
ptr
Pan troglodytes (chimpanzee)
Pathway
ptr04140
Autophagy - animal
ptr04142
Lysosome biogenesis
ptr04145
Phagocytosis
ptr04148
Efferocytosis
ptr05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
ptr00001
]
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagocytosis
453358 (VPS39)
04142 Lysosome biogenesis
453358 (VPS39)
04140 Autophagy - animal
453358 (VPS39)
04148 Efferocytosis
453358 (VPS39)
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
453358 (VPS39)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ptr04131
]
453358 (VPS39)
Membrane trafficking [BR:
ptr04131
]
Endosome - Lysosome transport
Tethering complex
Hops complex
453358 (VPS39)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Vps39_1
CNH
TPR_Vps41
zf-Vps39_C
Clathrin
LIF1_N
VPS18_solenoid_2nd
DUF4145
KCTD11_21_C
EcoR124_C
Motif
Other DBs
NCBI-GeneID:
453358
NCBI-ProteinID:
XP_009427163
Ensembl:
ENSPTRG00000006971
VGNC:
2462
LinkDB
All DBs
Position
16:complement(34128039..34177677)
Genome browser
AA seq
907 aa
AA seq
DB search
MHDAFEPVPILEKLPLQIDCLAAWEEWLLVGTKQGHLLLYRIRKDVVPADVASPESGSCN
RFEVTLEKSNKNFSKKIQQIHVVSQFKILVSLLENNIYVHDLLTFQQITTVSKAKGASLF
TCDLQHTETGEEVLRMCVAVKKKLQLYFWKDREFHELQGDFSVPDVPKSMAWCENSICVG
FKRDYYLIRVDGKGSIKELFPTGKQLEPLVAPLADGKVAVGQDDLTVVLNEEGICTQKCA
LNWTDIPVAMEHQPPYIIAVLPRYVEIRTFEPRLLVQSIELQRPRFITSGGSNIIYVASN
HFVWRLIPVPMATQIQQLLQDKQFELALQLAEMKDDSDSEKQQQIHHIKNLYAFNLFCQK
RFDESMQVFAKLGTDPTHVMGLYPDLLPTDYRKQLQYPNPLPVLSGAELEKAHLALIDYL
TQKRSQLVKKLNDSDHQSSTSPLMEGTPTIKSKKKLLQIIDTTLLKCYLHTNVALVAPLL
RLENNHCHIEESEHVLKKAHKYSELIILYEKKGLHEKALQVLVDQSKKANSPLKGHERTV
QYLQHLGTENLHLIFSYSVWVLRDFPEDGLKIFTEDLPEVESLPRDRVLGFLIENFKGLA
IPYLEHIIHVWEETGSRFHNCLIQLYCEKVQGLMKEYLLSFPAGKTSVPAGEEEGELGEY
RQKLLMFLEISSYYDPGRLICDFPFDGLLEERALLLGRMGKHEQALFIYVHILKDTRMAE
EYCHKHYDQNKDGNKDVYLSLLRMYLSPPSIHCLGPIKLELLEPKANLQAALQVLELHHS
KLDTTKALNLLPANTQINDIRIFLEKVLEENAQKKRFNQVLKNLLHAEFLRVQEERILHQ
QVKCIITEEKVCMVCKKKIGNRTCRCQRSGHLEAVLTPKPFSSLQCICKIPQWSGRALLL
FQRGKPS
NT seq
2724 nt
NT seq
+upstream
nt +downstream
nt
atgcacgacgctttcgagccagtgccgatcctagaaaagctgcctctgcaaatcgactgt
ctggctgcctgggaggaatggcttcttgtgggaaccaaacaaggacatcttcttctctat
aggattcggaaggacgttgtgccagcagatgtagcatcacctgaaagtggcagttgcaac
agatttgaagtgacactagagaaatccaataagaacttctccaaaaagattcagcagatc
catgtggtttcccagtttaagattctggtcagcttgttagaaaataacatttatgtccat
gacctattgacatttcaacaaatcactacggtttcaaaggcaaagggagcatcactgttt
acttgtgacctccagcacacagagaccggtgaggaggtgttacggatgtgtgtggcagta
aaaaagaagctgcagctctatttctggaaggacagggaatttcatgaattgcagggggac
tttagtgtgccagatgtgcccaagtccatggcgtggtgtgaaaattctatctgtgtgggt
ttcaagagagactactacctaataagggtggatggaaaggggtccatcaaagagctcttt
ccaacaggaaaacagctggagcccttagttgcacctctggcagatggaaaagtggctgtg
ggccaggatgatctcaccgtggtactcaatgaggaagggatctgcacacagaaatgtgcc
ctaaactggacggacataccagtggccatggagcaccagcctccctacatcattgcagtg
ttgcctcggtatgttgagatccgaacatttgaaccgaggcttctggtccaaagcattgaa
ttgcaaaggccccgtttcattacctcaggaggatcaaacattatctatgtggccagcaat
cattttgtttggagactcatccctgtccccatggcaacccaaatccaacaacttctccag
gacaagcagtttgaattggctctgcagctcgcagaaatgaaagatgattctgacagtgaa
aagcagcaacaaattcatcacatcaagaacttgtatgccttcaacctcttctgccagaag
cgttttgatgagtccatgcaggtctttgctaaacttggcacagatcccacccatgtgatg
ggcctgtaccctgacctgctgcccacagactacagaaagcagttgcagtatcccaaccca
ttgcctgtgctctccggggctgaattggagaaggctcacttagctctgattgactacctg
acacagaaacgaagtcaattggtaaagaagctgaatgactctgatcaccagtcaagcacc
tccccgctcatggaaggcactcccaccatcaaatccaagaagaagctgctacaaatcatc
gacaccaccctgctcaagtgctatctccacacaaatgtggccctggtggcccccttgcta
cgcctggagaacaatcactgccacatcgaggagagcgagcacgtgctgaagaaggctcac
aagtacagtgagcttatcatcctgtatgagaagaaggggctccacgagaaagctctgcag
gtgctcgtggaccagtccaagaaagccaactcccctctgaaaggccacgagaggacagtg
cagtatctgcagcatctgggcacagaaaacctgcatttgattttctcctactcagtgtgg
gtgctgagagacttcccagaagatggcctgaagatatttactgaagatctcccggaagtg
gagtctctgccacgtgatcgagtcctcggcttcttaatagagaattttaagggtctggct
attccttatctggaacacatcatccatgtttgggaggagacaggctctcggttccacaac
tgcctgatccagctatactgtgagaaggtgcaaggtctgatgaaggagtatctcctgtcc
ttccctgcaggcaaaacctcagtcccagctggagaggaagagggtgagctgggagaatac
cggcaaaagctcctcatgttcttggagatttccagctactatgatccaggccggctcatc
tgtgattttccctttgatggcctcttagaagaacgagctctcctgttggggcgcatgggg
aaacatgaacaagctcttttcatttatgtccacatcttgaaggatacaaggatggctgag
gagtactgccataaacactatgaccaaaacaaagatggcaacaaagatgtgtatctgtcc
ctgcttcggatgtacctgtcgccccccagcattcactgcctggggccaatcaagctggaa
ctactggagccaaaagccaacctccaggccgctctgcaggtcctcgagctgcaccacagc
aaactggacaccaccaaggccctcaaccttctgccagcaaacactcagatcaatgacata
cgcatcttcctggaaaaggtcttggaagaaaatgcacaaaagaaacggttcaatcaagtg
ctcaagaaccttctccatgcagaattcctgagggtccaggaagagcggattttacaccag
caggtgaagtgcatcatcacagaggagaaggtgtgcatggtgtgtaagaagaagattggg
aacaggacgtgccgctgccagagaagtggtcacttagaagcagtcctcactcccaagcca
ttttcttccctgcagtgcatttgcaagataccccaatggagtggtcgtgcactacttctg
ttccaaagaggtaaacccagctga
DBGET
integrated database retrieval system
