Pan troglodytes (chimpanzee): 453988
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Entry
453988 CDS
T01005
Symbol
PALB2
Name
(RefSeq) partner and localizer of BRCA2 isoform X2
KO
K10897
partner and localizer of BRCA2
Organism
ptr
Pan troglodytes (chimpanzee)
Pathway
ptr03440
Homologous recombination
ptr03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
ptr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
453988 (PALB2)
03460 Fanconi anemia pathway
453988 (PALB2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ptr03400
]
453988 (PALB2)
DNA repair and recombination proteins [BR:
ptr03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA complex
453988 (PALB2)
FA (Fanconi anemia) pathway
Downstream FA components
453988 (PALB2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PALB2_WD40
Microp_apicomplexa_20
Motif
Other DBs
NCBI-GeneID:
453988
NCBI-ProteinID:
XP_016785125
Ensembl:
ENSPTRG00000007890
VGNC:
10131
LinkDB
All DBs
Position
18:complement(26218478..26256025)
Genome browser
AA seq
1071 aa
AA seq
DB search
MDEPPGKPLSCEEKEKLKEKLAFLKREYSKTLARLQRAQRAEKIKHSIKKTVEEQDCLSQ
QDFSPQLKHSEPKNKICVYDKLHIKTHLDEETGEKTSITLDVGPESFNPGDGPGGLPIQR
TDDTQEHFPHRVSDPNGEQKQKLPSRRKKQQKRTFISQERDCVFGTDSLRLSGKRLKEQE
EISSKNPARSPVTEIRTHLLSLKSELPDSPEPVTEINEDSVLIPPTAQPEKGVDTFLRRP
NFTRATTVPLQTLSDSGSSQHLEHIPPKGSSELTTHDLKNIRFTSPVSLEAQGKKMTVST
DNLLVNKAISKSGQLPTSSNLEANISCSLNELTYNNLPANENQNLKEQNQTEKSLKSPSD
ALDGRNENLQESEILSQPKSLSLEATSPLSAEKHSCTVLEGLLFPAEYYVRTTRSMSNCQ
RKVALEAVIQSHLDVKKKGFKNKNKDASKNLNLSNEETDQSEIRMSGTCTGQPSSRTSQK
LLSLTKVSSPAGPTEDNDLSRKAVAQAPGRRYRGKRKSACTLASDHYEPLLPTSSLLVVN
RSKEEVTSHKYQHEKLFIRVKGKKSRHQKEDSLSWSNSAYLSLDDDAFTAPFHRDGMLSL
KQQLSFLSITDFQLPDEDFGPLKLEKVKSCSEKPVEPFESKMFGERHLKEGSCIFPEELS
PKRMDTEMEDLEEDLIVLPGKSHPKRPNSQSQHTKTGLSSSILLYTPLNTVAPDDNDRPT
TDMCSPAFPILGTTPAFGPQGSYEKASTEVAGRTCCTPQLAHLKDSVCLASDTKQFDSSG
SPAKPHTTLQVSGRQGQPTCDCDSVPPGTPPPIESFTFKENQLCRNTCQELHKHSVEQTE
TAELPASDSINPGNLQLVSELKNPSGSCSVDVSAMFWERAGCKEPCIITACEDVVSLWKA
LDAWQWEKLYTWHFAEVPVLQIVPVPDVYNLVCVALGNLEIREIRALFCSSDDESEKQVL
LKSGNIKAVLGLTKRRLVSSSGTLSDQQVEVMTFAEDGGGKENQFLMPPEETILTFAEVQ
GMQEALLGTTIMNNIVIWNLKTGQLLKKMHIDDSYQASVCHKAYSEMVPGR
NT seq
3216 nt
NT seq
+upstream
nt +downstream
nt
atggacgagcctcccgggaagcccctcagctgtgaggagaaggaaaagttaaaggagaaa
ttagcattcttgaaaagggaatacagcaagacactagcccgccttcagcgtgcccaaaga
gctgaaaagattaagcattctattaagaaaacagtagaagaacaagattgtttgtctcag
caggatttctcaccgcagctaaaacactcagaacctaaaaataaaatatgtgtttatgac
aagttacacatcaaaacccatcttgatgaagaaactggagaaaagacatctatcacactt
gatgttgggcctgagtcctttaaccctggagatggcccaggaggattacctatacaaaga
acagatgacacccaagaacattttccccacagggtcagtgaccctaatggtgagcaaaag
cagaagctgccaagcagaagaaagaagcagcagaagaggacatttatttcacaggagaga
gactgtgtctttggcactgattcactcagattgtctgggaaaagactaaaggaacaggaa
gaaatcagtagcaaaaatcctgctagatcaccagtaactgaaataagaactcacctttta
agtcttaaatctgaacttccagattctccagaaccagttacagaaattaatgaagacagt
gtattaattccaccaactgcccaaccagaaaaaggtgttgatacattcctaagaagacct
aatttcaccagggccactacagttcctttacagactctatcagatagcggtagtagtcag
caccttgaacacattcctcctaaaggtagcagtgaacttactactcacgacctaaaaaac
attagatttacttcacctgtaagtttggaggcacaaggcaaaaaaatgactgtctctaca
gataacctccttgtaaataaagctataagtaaaagtggccaactgcccacaagttctaat
ttagaggcaaatatttcatgttctctaaatgaactcacctacaataacttaccagcaaat
gaaaaccaaaacttaaaagaacaaaatcaaacagagaaatctttaaaatctcccagtgac
gctcttgatggcaggaatgaaaatcttcaggaaagtgagattctaagtcaacctaagagt
cttagcctggaagcaacctctcctctttctgcagaaaaacattcttgcacagtgcttgaa
ggccttctgtttcctgcagaatattatgttagaacaacacgaagcatgtccaattgccag
aggaaagtagccctggaggctgtcattcagagtcatttggatgtcaagaaaaaagggttt
aaaaataaaaataaggatgcaagtaaaaatttaaacctttccaatgaggaaactgaccaa
agtgaaattcggatgtctggcacatgcacaggacaaccaagttcaagaacctctcagaaa
cttctctcattaactaaagtcagctctcctgctgggcccactgaagataatgacttgtct
aggaaggcagttgcccaagcacctggtagaagatacagaggaaaaagaaaatcagcctgc
accctggcatcagatcattatgaaccacttttgccaacttctagcctgttggttgttaac
aggtccaaggaggaagtcacctcacacaaatatcagcacgaaaaattatttattcgagtg
aaagggaagaaaagtcgtcatcaaaaagaggattccctttcttggagtaatagtgcttat
ttatccttggatgatgatgctttcacggctccatttcatagggatggaatgctgagttta
aagcaacaactgtcttttctcagtatcacagactttcagttacctgatgaagactttgga
cctcttaagcttgaaaaagtgaagtcctgctcagaaaaaccagtggagccctttgagtca
aaaatgtttggagagagacaccttaaagagggcagctgtatttttccagaggaactgagt
cctaaacgcatggatacagaaatggaggacttagaagaggaccttattgttctaccagga
aaatcacatcccaaaaggccaaactcacaaagccagcatacaaagacgggcctttcttca
tccatattactttatactcctttaaatacggttgcgcctgatgataatgacaggcctacc
acagacatgtgttcacctgctttccccatcttaggtactactccagcctttggccctcaa
ggctcctatgaaaaagcatctacagaagttgctggacgaacttgctgcacaccccaactt
gctcatttgaaagactcagtctgtcttgccagtgatactaaacaattcgacagttcaggc
agcccagcaaaaccacataccaccctgcaagtgtcaggcaggcaaggacaacctacctgt
gactgtgactctgtcccgccaggaacacctccacccattgagtcattcacttttaaagaa
aatcagctctgtagaaacacatgccaggagttgcataaacattccgtcgaacagactgaa
acagcagagcttcctgcttctgatagcataaacccaggcaacctacaattggtttcagag
ttaaagaatccttcaggttcctgttccgtagatgtgagtgccatgttttgggaaagagcc
ggttgtaaagagccatgtatcataactgcttgcgaagatgtagtttctctttggaaagct
ctggatgcttggcagtgggaaaaactttatacctggcacttcgcagaggttccagtatta
cagatagttccagtgcctgatgtgtataatctcgtgtgtgtagctttgggaaatttggaa
atcagagagatcagggcattgttttgttcctctgatgatgaaagtgaaaagcaagtacta
ctgaagtctggaaatataaaagctgtgcttggcctgacaaagaggaggctagttagtagc
agtgggaccctttctgatcaacaagtagaagtcatgacgtttgcagaagatggaggaggc
aaagaaaaccaatttttgatgccccctgaggagactatactaacttttgctgaggtccaa
gggatgcaagaagctctgcttggtactactattatgaacaacattgttatttggaattta
aaaactggtcaactcctgaaaaagatgcacattgatgattcttaccaagcttcagtctgt
cacaaagcctattctgaaatggttcctggaaggtga
DBGET
integrated database retrieval system
