Pan troglodytes (chimpanzee): 454266
Help
Entry
454266 CDS
T01005
Name
(RefSeq) LOW QUALITY PROTEIN: polycystin-1-like protein 2
KO
K04988
polycystin 1L2
Organism
ptr
Pan troglodytes (chimpanzee)
Brite
KEGG Orthology (KO) [BR:
ptr00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
ptr04040
]
454266
04091 Lectins [BR:
ptr04091
]
454266
Ion channels [BR:
ptr04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
454266
Lectins [BR:
ptr04091
]
C-Type lectins
Others
454266
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Polycystin_dom
PKD_channel
PLAT
Ion_trans
REJ
GPS
Motif
Other DBs
NCBI-GeneID:
454266
NCBI-ProteinID:
XP_054524465
LinkDB
All DBs
Position
18:complement(79262543..79363743)
Genome browser
AA seq
2172 aa
AA seq
DB search
MSLTVAGNVSSNVTHQFTSPGEFTVFAECTTSEWHVTAQRQVTVRDKMETLSVTACSCLS
QSGASPLCQAVFGDPLWIQVELDGGTGVTYTVLLGDITLAESTTQKGSLPYNLMTLDRET
QKLMGPGRHRLEIQATGNTNTSTISRNITVHLVELLSGLQASWASDHLELGQDLLINISL
AQGIPEELTFEVAGLDATFSHEQVSFGEPFGIYRLAVPVEGTFLVTMLVRNAFSNLSLEI
GNITITAPSGLQEPSGMNAEGKSKGKGDMEVYIQPGPYVDPFTTVTLDWPDNDKELRFQW
SCGSCWALWSSCVERQLLHTDQRELVVPASCLPPPDSAVTLHLAVLRGQELENRAEQCLY
VSAPWELRPRVSCERNCRPVNASEDILLRVTMGEDSPVAMFSWYLDNTPTEQAEPLPDAC
RLRGFWPRSLTLLQSNTSTLLLNSSFLQSRGEVIRIRATALTRHAYGEDTYVISTLPPPE
VPACTIAPEEGTVLTSFAIFCNASTALGPLEFCFCLESGSCLHCGPEPALPSVYLPLGKE
NNDFVLTVVISATNHAGDTQQTQAMAKVALGDTCVEDVAFQAAVSEKIPTALQGEGGPEQ
LLQLAKAVSSVPNQEHESQGSGQSLSIDVRQKVREHVLGSLSAVTTGLEDVQRVQELAEV
LREVTCRSKELTPLAQWEASLALQHASEALLTVSAKARPEDQRCQAATRDLFQAVGSVLE
ASLSNRPEEPAEASSSQFATVPQLLGVVEHVQTALLLGKLPGGLPAMLATPSISVYTNRI
QPWSWQGSSLRTDAADSATFTLPAASSLGSLEGGQEPVDIKMMSFPKSPFPARSHFDVSG
TVGGLRVTSPSGQLIPVKNLSENIEILLPRHSQRHSQPTVLNLTSPEALWVNVTSGEATL
GIQLHWRPDIALTLSLGYGYHPNKSSYDAQTRLVPMVAPDELPTWILSPQDLRFGEGVYY
LTVVPESDLEPAPGRDLTVGITTFLSHCVLWDEVQETWDDSGCQVGPRTSLYQTHCLCNH
LTFFGSTFLVMPNAIDIHQTAELFATFEDNPVVVTTVGCLCVVYVLVVIWARRKDAQDQA
KVKVTVLEDNDPFAQYHYLVTVYTGHRRGAATSSKVTVTLYGLDGESEPHHLADPDTLVF
ERGAVDAFLLSTLFPLGELRSLRLWHDNSGDRPSWYVSRVLVYDLAMDRKWYFLCNSWLS
VNVGDCVLNKVFPVATEQDRKQFSHLFFMKTSAGFQDGHIWYSIFSRCARSSFTRVQRVS
CCFSLLLCTMLTSIMFWGVPKDPAEQKMDLGKIEFTWQEVMIGLESSILMFPINLLIVQI
FRNTRPRVAKEKNTGKWDRGSPNLTPSPQPMEDGLLTPEAVTKDVSRIVSSLFKALKVPS
PALGWDSVNLMDINSLLALVEDVICPQNTSGQVFWEEAKKREDPVTLTLGSSEMKEKSQC
PKPKAARSGPWKDSAYRQCLYLQLEHVEQKLRLVGPRGFPQPHSHARALRQLQTLKGGLG
VQPGTWAPAMCSALWVNKPPQGLPWWCILVGWLLVAATSGVAAFFTMLYGLHYGRASSLR
WLISMAVSFVESVFVTQPLKVLGFAAFFALVLKRVDDEEDTVAPLPGHLLGPDPYALFRA
RRNSSRDVYQPPLTTAIEKMKTTHLKEQKAFALIREILAYLGFLWLLLLVAYGQRDPSAY
HLNRHLQHSFTRGFSGVLGFREFFEXANTTLVSNLYGHPPGFITDGNSKLVGSAQIRQVS
VRESSCPLAQQLQASLNGCRAPYSLDAEDLADYGEGWNATALSNGSSFPQAWQYQSQDQR
QGYPIWGKLTVYRGGGYVVPLGTDRQSTSRILRYLFDNTWLDALTRAVFVEFTVYNANVN
LFCIVTLTLETSALGTFFTHPALQSLRLYPFTDGWHPFVVAAELIYFLFLLYYMVVQGKR
MRKQTWGHFRSKWNLLELAIILASWSALAVFVKRIVMAERDLQRCRNHREEGISFSETAA
ADAALGYIIAFLVLLSTVKLWHLLRLNPKMNMITAALRRAWGNISGFIIVILTMLLAYSI
ASNLIFGWKLRSYKTLFDAAETMISLQLGIFNYEEVLDYRPVLGSFLIGSCIVFMTFVVL
NLFISVILVAFSEEQKYYQLSEEGEIVDLLLMKILSFLGIKCKRKEPGSSREQPGSLSQT
RHSQPAQALPKV
NT seq
6519 nt
NT seq
+upstream
nt +downstream
nt
atgtccctgactgtggccggcaatgtgtccagcaatgtgacccaccagttcacatctcct
ggggaattcaccgtgtttgctgaatgcacaaccagtgagtggcatgtgacagctcagagg
caggtgaccgtgcgagacaagatggagacgctcagtgtgactgcatgctcctgcctgtcc
cagtcaggagccagccctctctgccaggctgtctttggggatcctctgtggattcaggtg
gagcttgatggaggaacaggagtgacttacactgtgcttttgggtgacataaccctggcc
gagtccaccacccaaaagggctcgctaccgtacaatctgatgaccctggacagagaaacc
cagaaactgatgggccctgggaggcaccgcctggagatccaagccaccggcaacaccaac
acctctacaatctccaggaacatcacagtccacttggtggagctgctgtcagggctgcag
gcctcctgggcttctgaccatttggagcttggacaggacctattgatcaacatctcattg
gctcagggcatcccggaagagctgacctttgaggtggctggactcgatgcaaccttctcc
cacgagcaagtgagctttggagagccatttgggatttaccgcctggctgttccagttgaa
ggcacctttctggtcaccatgctggtgagaaatgccttctccaacctgagtttggaaatc
gggaacatcactatcacagccccttccggtctccaagaaccatccgggatgaatgctgaa
ggaaagagtaaaggtaaaggcgatatggaggtgtatatccaacctggtccatatgtggat
cctttcacgacagtgaccctggactggccagacaatgacaaggagttacgcttccaatgg
tcatgtgggtcttgctgggctctgtggagcagctgtgttgagaggcagctgcttcacaca
gaccagagggagctggtggttccagcatcctgcctgccgccgcctgactctgctgtcacc
ctgcacctggctgttctgagaggccaagagctggagaacagggcagagcagtgcctctac
gtgtctgcgccctgggaactcaggcctcgagtcagctgtgagaggaactgcaggccagtt
aatgccagcgaagacattctgctcagggtcaccatgggggaggactccccagtggctatg
ttcagctggtatttggacaacaccccaacagagcaggccgagcccctcccggatgcctgc
agactcagaggattttggccaaggtccttaaccctcctccagagcaacacctccacgttg
ctgctgaacagctcgtttctgcagtcccggggagaggtcatccgaatcagagccacagca
ctgaccaggcatgcctatggggaggacacctatgtgatcagcactctgcctccccctgag
gtgcctgcctgcactattgccccagaggagggcaccgttctgacgagctttgccatcttc
tgcaacgcctccacagccctgggacccctggagttctgcttctgtctggaatcaggttcc
tgcctacactgtggccctgaacctgccctcccatcagtgtatctgccacttggaaaggag
aacaatgactttgtgctgacagtagttatttctgccaccaatcatgcaggggacacacag
cagacccaggccatggctaaggtggcactcggagacacatgtgttgaggatgtagcattc
caggctgccgtgtcagagaaaatccccacagctctgcaaggcgagggtggccccgagcag
ctcctccagctggccaaggctgtgtcctctgtgccgaaccaagagcatgaaagccagggc
tcaggacagtcactgagcatagacgtcagacagaaggtcagagagcatgtgctgggatca
ctgtctgcagtcaccaccggcttggaggacgtgcagagggtgcaggagctggccgaggtg
ctgagagaggtgacctgccggagtaaggaactcacacccttggcccagtgggaggccagc
ttggctctacagcatgccagtgaggccctgttgacagtgagtgccaaggcccgccctgag
gaccagaggtgccaggcagccaccagggacctgtttcaggctgtgggcagtgtgctggaa
gcttccctgagcaacagaccagaagagcctgcggaggccagcagcagccagtttgccaca
gtgccgcagctgcttggagtcgtggagcatgtgcagaccgccctcctgctgggaaaactg
ccagggggccttccagccatgctggccaccccctccatctctgtgtacacaaacagaata
caaccctggagttggcaaggctcctccctgcgcactgatgccgcagactctgcaaccttc
acgctgcccgctgcctcctccctcggctctctggagggcggccaggagcctgtggatata
aagatgatgagtttcccaaagagcccctttccagcccgaagccactttgatgtcagcggg
actgtcggtggcctccgtgtgaccagccctagtggtcaactcatacctgtgaagaatctg
tcggagaatatcgagatcctgctgccccggcattcacaaagacacagccagccgaccgtg
ttgaacctgaccagtcctgaagctttgtgggtgaacgtgacttcaggggaggcaaccttg
gggatccagctgcactggagaccggacattgcactcacgcttagcctgggctatggctac
caccccaacaagagcagttacgatgcccaaactcgcctcgtaccaatggtggctccagat
gagctgcccacgtggatcctgagcccacaggacctgcgttttggagaaggggtctactat
ttgactgtggtccctgagtctgacttggagccagcccccggcagggacctcacagttggc
atcaccaccttcctgtctcactgtgtgctctgggatgaggtccaggagacttgggacgac
tcagggtgccaggtggggcctcggaccagcctctaccagacacactgcctctgcaaccac
ctcactttcttcggaagcacgttcctggtgatgcccaatgccatcgacatccaccagact
gctgagctctttgccacctttgaggacaaccctgtggtcgtgaccaccgtgggctgcctg
tgtgtggtctacgtgctggtggtgatctgggcgaggaggaaggacgctcaggatcaggcc
aaggtgaaggtcacagtgctggaagacaatgatccctttgctcaataccactacctggtg
acagtctacacaggacaccgacgaggggcagccacgtcctcaaaggtgactgtcaccctg
tatggcctggatggagagagtgagccccaccacctggctgatcccgacactctggttttt
gagcgaggagcagtggatgccttcctcctctccaccctgttccccctgggagaactgcgg
agcctccggctgtggcatgacaactcaggggaccggccatcgtggtatgtcagccgggtg
ctggtctatgacctggcgatggaccggaagtggtatttcctgtgcaactcctggctatcc
gtcaatgttggagattgtgtcctcaacaaggtgtttcctgtggccacggagcaggacaga
aaacaattcagccacctgtttttcatgaagacttccgcgggcttccaggatggacacatc
tggtattcgatcttcagccgctgcgctcgcagcagcttcacccgcgtccagagggtgtcc
tgctgcttctccctgctgctgtgcaccatgctgaccagcatcatgttctggggggtcccc
aaggacccagctgagcaaaagatggacttgggtaaaattgaattcacctggcaggaggtg
atgattggcctggagagctccatcctcatgttccccatcaacctcctgattgttcagatc
tttcggaacactcgtccccgggtcgcgaaggagaagaacactgggaaatgggaccggggg
tcccccaacctgactccctccccacagcccatggaggacggccttctgacacctgaggca
gtgaccaaggatgtgtcaagaatcgtcagctccctcttcaaagctctcaaggtgccatcc
cccgccttgggctgggactcagtgaacttgatggacatcaacagtctcctcgccttggtg
gaagatgtcatttgtccacagaacacatcagggcaggtgttctgggaggaagccaaaaag
agagaggaccctgtaacactcactttggggtcatcagaaatgaaagagaaatcacagtgt
cccaagcccaaggcggcacggagtggcccctggaaggacagcgcctacaggcagtgtctg
taccttcagctggaacacgtggagcaaaagctgcggctggtggggccccgaggcttccct
cagccccacagccatgcccgggccctcaggcagctgcagaccctgaagggcggcctgggg
gtacagccgggcacctgggcccctgcaatgtgcagcgctctttgggtgaacaaaccccca
caaggcctgccctggtggtgcatcctggtgggctggctcctggtagcggccaccagtggc
gtggcggccttcttcaccatgctctacggcctgcactacgggagggccagctccctcagg
tggctcatctccatggctgtctccttcgtggagagcgtgttcgtcacccagcccctgaag
gtgctgggatttgctgctttctttgcactggtcttgaagagagtggacgatgaggaggat
actgtggccccgctgccaggacatctgttgggcccagacccctatgccttgttccgagca
cgaagaaacagcagcagggatgtctaccagccacctctcaccactgccattgagaagatg
aaaaccacccacctcaaggaacagaaagcatttgccctcatcagagaaatcctggcatac
ttgggcttcctgtggttgctactgctggtggcctatgggcagagggaccccagcgcctac
cacctcaacagacacctccagcacagcttcaccaggggcttttcaggtgtgctcggcttc
cgagagttcttcgagtgagccaacaccaccctcgtgagcaacctgtatggtcacccccca
ggctttatcactgatgggaactccaagctggttggcagtgcccagattcgtcaagtgagt
gtccgggaaagctcttgccctcttgcccagcagctgcaggcatctctcaacggatgccgt
gcaccatattccctggatgctgaagacctggcagactatggggaaggctggaatgccacc
gccctcagtaatggcagtagctttccccaggcttggcagtaccagagccaggaccaacgt
caagggtatcccatctggggcaaactcactgtgtaccggggaggaggctacgtggtcccc
ttggggactgatcgccaaagcacgtcaagaattctccgctatctctttgacaacacctgg
ctggacgccttgaccagagctgtgtttgtggagttcactgtctacaacgccaacgtcaac
ctgttctgcattgtcacgctgacgctagagaccagcgctctgggcaccttctttacgcac
ccggccctgcagagccttcgcctgtaccccttcaccgacggctggcaccccttcgtggta
gcggcagagctcatctacttcctcttcctcctctactacatggtggtgcagggcaagcgc
atgaggaagcagacgtggggccatttccgcagcaagtggaatcttctggagctggccatc
atcctggccagctggagcgccctggcggtgtttgtgaagaggattgtcatggccgaaagg
gacctccagcgctgccggaaccacagggaggaaggcatcagcttcagtgagacagcagca
gccgatgctgcccttggctacatcattgccttcctggtactcctgtccacagtgaagctt
tggcatctgctcaggttgaatcccaaaatgaacatgattacggcagccctacgccgtgcc
tggggcaacatttcaggctttatcattgtcatccttaccatgctcctggcttactccatc
gcgtcgaacttaatatttggttggaaactccgttcctacaaaaccctctttgatgcggcg
gagacgatgatcagccttcagctgggaatcttcaactacgaggaggtcctggactataga
ccagtgcttggctccttcctcattgggtcctgcatcgtttttatgacatttgtggtgctg
aacctgtttatctctgtcatcctggtggccttcagtgaggagcaaaaatactatcagctg
tcagaggaaggggagatcgtagatttgctgctgatgaaaatactcagtttcctgggcatt
aagtgtaagagaaaggagcctggaagcagcagggagcagcctgggtccctgtcccagact
cgccactctcaaccagcacaagctttgcccaaggtctaa
DBGET
integrated database retrieval system
