Pan troglodytes (chimpanzee): 454393
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Entry
454393 CDS
T01005
Symbol
FANCA
Name
(RefSeq) Fanconi anemia group A protein isoform X3
KO
K10888
fanconi anemia group A protein
Organism
ptr
Pan troglodytes (chimpanzee)
Pathway
ptr03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
ptr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03460 Fanconi anemia pathway
454393 (FANCA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ptr03400
]
454393 (FANCA)
DNA repair and recombination proteins [BR:
ptr03400
]
Eukaryotic type
DSBR (double strand breaks repair)
FA (Fanconi anemia) pathway
FA core complex
454393 (FANCA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fanconi_A_N
FANCA_CTD
FANCA_arcN
FANCA_helical
EspA_EspE
Motif
Other DBs
NCBI-GeneID:
454393
NCBI-ProteinID:
XP_016785906
Ensembl:
ENSPTRG00000008492
VGNC:
5765
UniProt:
H2QBS1
LinkDB
All DBs
Position
18:complement(87950616..88034534)
Genome browser
AA seq
1503 aa
AA seq
DB search
MATAQGLDLRGVAWPPPANGCARLAAANRKAARARAQGAAAGAVGAKAMSDSWVPNSASG
QDPGRRRRSWAELLAGRVKREKYNPERAQKLKESAVRLLRSHQDLNALLLEVEGPLCKKL
SLSKVIDCDSSEAYANHSSSFIGSALQDQASRLGIPVGILSAGVVASSVGQICTAPAETS
HPVLLTVEQRKKLSSLLEFAQYLLAHSMFSRLSFCQELWKIQSSLLLEAVWHLHVQGIVS
LQELLESHPDMHAVGSWLFRNLCCLCEQMEASCQHADVARAMLSDFVQMFVLRGFQKNSD
LRRTVEPEKMPQVAVDVLQRMLIFALDALAAGVQEESSTHKIVRCWFGVFSGHTLGSVIS
TDPLKRFFSHTLTQILTHSPVLKASDAVQMQREWSFARTHPLLTALYRRLLVMLSAEELV
GHLQEVLETQEVHWQRVLSFVSALVVCFPEAQQLLEDWVARLMAQAFESCQLDSMVTAFL
VVRQAALEGPSAFLSYADWFKASFGSTRGYHGCSKKALVFLFTFLSDLVPFESPRYLQVH
ILHPPLVPSKYRSLLTDYISLAKTRLADLKVSIENMGLYEDLSSAGDITEPHSQALQDVE
KAIMVFEHTGKIPVTVMEASIFRRPYYVSHFLPALLTPRVLPKVPDSRVAFIESLKRADK
IPPSLYSTYCQACSAAEEKPEDAALGVRAEPSSAEEPLGQLRAALGELRASMTDPSQRDV
ISAQVAVISERLRAVLGHNEDDSSVEISKIQLSINTPRLEPREHMAVDLLLTSFCQNLMA
ASSVAPPERQGPWAALFVRTMCGRVLPAVLTRLCQLLRHQGPSLSAPHVLGLAALAVHLG
ESRSALPEVDVGPPAPDAGLPVPALFDSLLTCRTRDSLFFCLKFCTAAISYSLCKFSSQS
RDTLCSCLSPGLIKKFQFLMFRLFSEARQPLSEEDVASLSWRPLHLPSADWQRAALSLWT
HRTFRELLKEEDVHLTYQDWLHLELEIQPEADALSDTERQDFHQWAIHEHFLPESSASGG
CDGDLQAACTILVNALMDFHQSSRSYDHSENSDLVFGGRTGNEDIISRLQEMVADLELQQ
DLSVPLGHTPSQGHFLFEIFRRRLQALTSGWSVAASLQRQRELLMYKRILLRLPSSVLCG
SSFQAEQPITARCEQFFHLVNSEMRNFCSHGGALTQDITAHFFRGLLNACLRSRDPSLMV
DFILAKCQTKCPLILTSALVWWPSLEPVLLCRWRRHCQSPLPRELQKLQEGRQFASDFLS
PEAASLAPNPDWLSAAALHFAIQQVREENIRKQLKKLDCEREELLVFLFFFSLMGLLSSH
LTSNSTRDLPKAFHVCAAILECLEKRKISWLALFQLTESDLRLGRLLLRVAPDQHTRLLP
FAFYSLLSYFHEDAAIREEAFLHVAVDMYLKLVQLFVAGDTSTVSPPAGRSLELQGQGNP
VELITKARLFLLQLIPRCPKKSFSHVAELLADRGDCDPEVSAALQSRQQAAPDADLSQEP
YLF
NT seq
4512 nt
NT seq
+upstream
nt +downstream
nt
atggccacggcgcaaggcctcgacctgaggggcgtggcctggccgccgccagccaacggg
tgtgcgcgcctggccgcagccaataggaaggcagcgcgggctcgggcgcagggagccgcc
gccggggctgtaggcgccaaggccatgtccgactcgtgggtcccgaactccgcctcgggc
caggacccagggcgccgccggaggtcctgggccgagctgctggcgggaagggtcaagagg
gaaaaatataatcctgaaagggcacagaaattaaaggaatcagctgtgcgcctcctgcga
agccatcaggacctgaatgcccttttgcttgaggtagaaggtccactgtgtaaaaaattg
tctctcagcaaagtgattgactgtgacagttctgaggcgtatgctaatcattctagttca
tttataggctctgctttgcaggatcaagcctcaaggctggggattcccgtgggtattctc
tcagccggggtggttgcctctagcgtgggacagatctgcacggctccagcggagaccagt
caccctgtgctgctgactgtggagcagagaaagaaactgtcttccctgttagagtttgct
cagtatttattggcacacagtatgttctcccgtctttccttctgtcaagaattatggaaa
atacagagttctttgttgcttgaagctgtgtggcatcttcacgtacaaggcattgtgagc
ctgcaagagctgctggaaagccatcccgacatgcatgctgtgggatcgtggctcttcagg
aatctgtgctgcctttgtgaacagatggaagcatcctgccagcatgctgatgtcgccagg
gccatgctttctgattttgtgcaaatgtttgttttgaggggatttcagaaaaactcagat
ctgagaagaactgtggagcctgaaaaaatgccgcaggtcgcggttgatgtactgcagaga
atgctgatttttgcacttgacgctttggctgctggagtacaggaggagtcctccactcac
aagatcgtgaggtgctggttcggagtgttcagtggacacacgcttggcagtgtaatttcc
acagatcctctgaagaggttcttcagtcataccctgactcagatactcactcacagccct
gtgctgaaagcatctgatgctgttcagatgcagagagagtggagctttgcgcggacacac
cctctgctcaccgcactgtaccgcaggctcttagtgatgctgagtgcagaggagttggtt
ggccatttgcaagaagttctggaaacgcaggaggttcactggcagcgagtgctctccttt
gtgtctgcccttgttgtctgcttcccagaagcgcagcagctgcttgaagactgggtggcg
cgtttgatggcccaggcattcgagagctgccagctggacagcatggtcactgcgttcctg
gtggtgcgccaggcagcactggagggcccctctgcgttcctgtcatatgcagactggttc
aaggcctcctttgggagcacgcgaggctaccatggctgcagcaagaaggccctggtcttc
ctgtttacgttcttgtcagacctcgtgccttttgagtctccccggtacctgcaggtgcac
attctccacccacccctggttcccagcaagtaccgctccctcctcacagactacatctca
ttggccaagacacggctggccgacctcaaggtttctatagaaaacatgggactctacgag
gatttgtcatcagctggggacattactgagccccacagccaagctcttcaggatgttgaa
aaggccatcatggtgtttgagcatacggggaaaatcccagtcaccgtcatggaggccagc
atattcaggaggccttactacgtgtcccacttcctccctgccctgctcacacctcgagtg
ctccccaaagtccctgactcccgtgtggcgtttatagagtctctgaagagagcagataaa
atccccccatctctgtactccacctactgtcaggcctgctccgctgctgaagaaaagcca
gaagatgcagccctgggagtgagggcagaacccagctctgctgaggagcccctgggacag
ctcagagctgcactgggagagctgagagcctccatgacagaccccagccagcgtgatgtt
atatcagcacaggtggcagtgatttctgaaagactgagggctgtcctgggccacaatgag
gatgacagcagcgttgagatatcaaagattcagctcagcatcaacacgccgagactggag
ccacgggaacacatggctgtggacctcctgctgacgtctttctgtcagaacctgatggct
gcctccagtgtcgctcccccggagaggcagggtccctgggctgccctctttgtgaggacc
atgtgtggacgtgtgctccccgcagtgctcacccggctctgccagctgctccgtcaccag
ggcccgagcctgagtgccccacatgtgctggggttggctgccctggccgtgcacctgggt
gagtccaggtctgcgctcccagaggtggatgtgggtcctcctgcacctgatgctggcctt
cctgtccctgcgctcttcgacagcctcctgacctgtaggacgagggattccttgttcttc
tgcctgaaattttgtacagcagcaatttcttactctctctgcaagttttcttcccagtca
cgagatactttgtgcagctgcttatctccaggccttattaaaaagtttcagttcctcatg
ttcagattgttctcagaggcccgacagcctctttctgaggaggacgtagccagcctttcc
tggagacccttgcaccttccttctgcagactggcagagagctgccctctctctctggaca
cacagaaccttccgagagctgttgaaagaggaagatgttcacttaacttaccaagactgg
ttacacctggagctggaaattcaacctgaagctgatgctctttcagatactgaacggcag
gacttccaccagtgggcgatccacgagcactttctccctgagtcctcggcttcagggggc
tgtgacggagacctgcaggctgcgtgtaccattcttgtcaacgcactgatggatttccac
caaagctcaaggagttatgaccactcagaaaattctgatttggtctttggtggccgcaca
ggaaatgaggatattatttccagattgcaggagatggtagctgacctggagctgcagcaa
gacctctcagtgcctctcggccacaccccttcccaggggcacttcctctttgagattttc
cgcagacggctccaggctctgacaagcgggtggagcgtggctgccagccttcagagacag
agggagctgctaatgtacaaacggatcctcctccgcctgccttcgtctgtcctctgcggc
agcagcttccaggcagaacagcccatcactgccagatgcgagcagttcttccacttggtc
aactctgagatgagaaacttctgctcccacggaggtgccctgacacaggacatcactgcc
cacttcttcaggggcctcctgaacgcctgtctgcggagcagagacccctccctgatggtc
gacttcatactggccaagtgccagacgaagtgccccttaattttgacctctgctctggtg
tggtggccgagcctggagcctgtgctgctctgccggtggaggagacactgccagagcccg
ctgccccgggaactgcagaagctacaagaaggccggcagtttgccagcgatttcctctcc
cctgaggctgcctccctggcacccaacccggactggctctcagctgctgcactgcacttt
gcgattcaacaagtcagggaagaaaacatcaggaagcagctaaagaagctggactgcgag
agagaggagctattggttttccttttcttcttctccttgatgggcctgctctcgtcacat
ctgacctcaaatagcaccagagacctgccaaaggctttccacgtttgtgcagcaatcctc
gagtgtttagagaagaggaagatatcctggctggcactctttcagttgacagagagtgac
ctcaggctggggcggctcctcctccgtgtggccccggatcagcacaccaggctgctgcct
tttgctttttacagtcttctctcctacttccatgaagacgcggccatcagggaagaggcc
ttcctgcatgttgctgtcgacatgtacttgaagctggtccagctcttcgtggctggggat
acaagcacagtttcacctccagctggcaggagcctggagctccagggtcagggcaaccct
gtggaactgataacaaaagctcgtctttttctgctgcagttaatacctcggtgcccgaaa
aagagcttctcacacgtggcagagctgctggctgatcgtggggactgcgacccagaggtg
agcgccgccctccagagcagacagcaggctgcccctgacgctgacctgtcccaggagcct
tatctcttctga
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integrated database retrieval system
