Pan troglodytes (chimpanzee): 454414
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Entry
454414 CDS
T01005
Symbol
RPA1
Name
(RefSeq) replication protein A 70 kDa DNA-binding subunit
KO
K07466
replication factor A1
Organism
ptr
Pan troglodytes (chimpanzee)
Pathway
ptr03030
DNA replication
ptr03420
Nucleotide excision repair
ptr03430
Mismatch repair
ptr03440
Homologous recombination
ptr03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
ptr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
454414 (RPA1)
03420 Nucleotide excision repair
454414 (RPA1)
03430 Mismatch repair
454414 (RPA1)
03440 Homologous recombination
454414 (RPA1)
03460 Fanconi anemia pathway
454414 (RPA1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ptr03000
]
454414 (RPA1)
03032 DNA replication proteins [BR:
ptr03032
]
454414 (RPA1)
03400 DNA repair and recombination proteins [BR:
ptr03400
]
454414 (RPA1)
Transcription factors [BR:
ptr03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
454414 (RPA1)
DNA replication proteins [BR:
ptr03032
]
Eukaryotic type
DNA Replication Elongation Factors
RPA (replication protein A)
454414 (RPA1)
DNA repair and recombination proteins [BR:
ptr03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
RPA (replication factor A)
454414 (RPA1)
MMR (mismatch excision repair)
454414 (RPA1)
DSBR (double strand breaks repair)
HR (homologous recombination)
454414 (RPA1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rep_fac-A_C
REPA_OB_2
Rep-A_N
tRNA_anti-codon
DUF223
IBR
Motif
Other DBs
NCBI-GeneID:
454414
NCBI-ProteinID:
XP_511254
Ensembl:
ENSPTRG00000008539
VGNC:
9570
UniProt:
H2QBU7
A0A6D2X3Z4
LinkDB
All DBs
Position
19:12314246..12386375
Genome browser
AA seq
616 aa
AA seq
DB search
MVGQLSEGAIAAIMQKGDTTIKPILQVINIRPITTGNSPPRYRLLMSDGLNTLSSFMLAT
QLNPLVEEEQLSSNCVCQIHRFIVNTLKDGRRVVILMELEVLKSAEAVGVKIGNPVPYNE
GLGQPQVAPPAPAASPAASSRPQPQNGSSGVGSTVSKAYGASKTFGKAAGPSLSHTSGGT
QSKVVPIASLTPYQSKWTICARVTNKSQIRTWSNSRGEGKLFSLELVDESGEIRATAFNE
QVDKFFPLIEVNKVYYFSKGTLKIANKQFTAVKNDYEMTFNNETSVMPCEDDRHLPTVQF
DFTGIDDLENKSKDSLVDIIGICKSYEDATKITVRSNNREVAKRNIYLMDTSGKVVTATL
WGEDADKFDGSRQPVLAIKGARVSDFGGRSLSVLSSSTIIANPDIPEAYKLRGWFDAEGQ
ALDGVSISDLKSGGVGGSNTNWKTLYEVKSENLGQGDKPDYFSSVATVVYLRKENCMYQA
CPTQDCNKKVIDQQNGLYRCEKCDTEFPNFKYRMILSVNIADFQENQWVTCFQESAEAIL
GQNAAYLGELKDKNEQAFEEVFQNANFRSFIFRVRVKVETYNDESRIKATVMDVKPVDYR
EYGRRLVMSIRRSALM
NT seq
1851 nt
NT seq
+upstream
nt +downstream
nt
atggtcggccaactgagcgagggggccattgcggccatcatgcagaagggggatacaacc
ataaagcccatcctccaagtcatcaacatccgtcccattactacggggaatagtccgccg
cgttatcgactgctcatgagtgatggattgaacactctatcctctttcatgttggcaaca
cagttgaaccctctcgtggaggaagaacaattgtccagcaactgtgtatgccagattcac
agatttattgtgaacactctgaaagacggaaggagagtagttatcttgatggaattagaa
gttttgaagtcagctgaagcagttggagtgaagattggcaatccagtgccctataatgaa
ggactcgggcagccgcaagtagctcctccagcgccagcagccagcccagcagcaagcagc
aggccccagccgcagaatggaagctcgggagtgggttctactgtttctaaggcttatggt
gcttcaaagacatttggaaaagctgcaggtcccagcctgtcacacacttctgggggaaca
cagtccaaagtggtgcccattgccagcctcactccttaccaatccaagtggaccatttgt
gctcgtgttaccaacaaaagtcagatccgtacctggagcaactcccgaggggaagggaag
cttttctctctagaactggttgatgaaagtggtgaaatccgagccacagctttcaatgag
caagtggacaagttctttcctcttattgaagtgaacaaggtgtattatttctcgaaaggc
accctgaagattgctaacaagcagttcacagctgttaaaaatgactatgagatgaccttc
aataacgagacttccgtcatgccctgtgaggacgaccgtcatttacctacggttcagttt
gatttcacagggattgatgacctcgagaacaagtcgaaagactcacttgtagacatcatc
gggatctgcaagagctatgaagacgccactaaaatcacagtgaggtctaacaacagagaa
gttgccaagaggaatatctacttgatggacacatccgggaaggtggtgactgctacactg
tggggggaagatgctgataaatttgatggttctagacagcccgtgctggctatcaaagga
gcccgagtctctgatttcggtggacggagcctctctgtgctgtcttcaagcactatcatt
gcgaatcctgacatcccagaggcctataagcttcgtggatggtttgacgcagaaggacaa
gccttagatggtgtttccatctctgatctaaagagcggcggagtcggagggagtaacacc
aactggaaaaccttgtatgaggtcaaatccgagaacctgggccaaggcgacaagccggac
tactttagttctgtggccacagtggtgtatcttcgcaaagagaactgcatgtaccaagcc
tgcccgactcaggactgcaataagaaagtgatcgatcaacagaatggattgtaccgctgt
gagaagtgcgacaccgaatttcccaatttcaagtaccgcatgatcctgtcagtaaatatt
gcagattttcaagagaatcagtgggtgacttgtttccaggagtctgccgaagctatcctt
ggacaaaatgctgcttatcttggggaattaaaagacaagaatgaacaggcatttgaagaa
gttttccagaatgccaacttccgatctttcatattcagagtcagggtcaaagtggagacc
tacaacgacgagtctcgaattaaggccactgtgatggacgtgaagcccgtggactacaga
gagtatggccgaaggctggtcatgagcatcaggagaagtgcattgatgtga
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