Pan troglodytes (chimpanzee): 454848
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Entry
454848 CDS
T01005
Symbol
ABCA5
Name
(RefSeq) cholesterol transporter ABCA5 isoform X1
KO
K05648
ATP-binding cassette, subfamily A (ABC1), member 5
Organism
ptr
Pan troglodytes (chimpanzee)
Pathway
ptr02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
ptr00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
454848 (ABCA5)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ptr02000
]
454848 (ABCA5)
Transporters [BR:
ptr02000
]
ABC transporters, eukaryotic type
ABCA (ABC1) subfamily
ABCA5, 6, 8, 9, 10 subgroups
454848 (ABCA5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
ABC2_membrane_3
R1_ABCA1
AAA_21
RsgA_GTPase
AAA_29
AAA_23
Motif
Other DBs
NCBI-GeneID:
454848
NCBI-ProteinID:
XP_016788312
Ensembl:
ENSPTRG00000009587
VGNC:
6318
UniProt:
H2QDR3
LinkDB
All DBs
Position
19:complement(82222680..82303442)
Genome browser
AA seq
1642 aa
AA seq
DB search
MSTAIREVGVWRQTRTLLLKNYLIKCRTKKSSVQEILFPLFFLFWLILISMMHPNKKYEE
VPNIELNPMDKFTLSNLILGYTPVTNITSSIMQKVSTDHLPDVIITEEYTNEKEMLTSSL
SKPSNFVGVVFKDSMSYELRFFPDMIPVSSIYMDSRAGCSKSCEAAQYWSSGFTVLQASI
DAAIIQLKTNVSLWKELESTKAVIMGETAVVEIDTFPRGVILIYLVIAFSPFGYFLAIHI
VAEKEKKIKEFLKIMGLHDTAFWLSWVLLYTSLIFLMSLLMAVIATASLLFPQSSSIVIF
LLFFLYGLSSVFFALMLTPLFKKSKHVGIVEFFVTVAFGCIGLMIILIESFPKSLVWLFS
PFCHCTFVIGIAQVMHLEDFNEGASFSNLTAGPYPLIITVIMLTLNSIFYVLLAVYLDQV
IPGEFGLRRSSLYFLKPSYWSKSKRNYEELSEGNVNGNISFSEIIEPVSSEFVGKEAIRI
SGIQKTYRKKGENVEALRNLSFDIYEGQITALLGHSGTGKSTLMNILCGLCPPSDGFASI
YGHRVSEIDEMFEARKMIGICPQLDIHFDVLTVEENLSILASIKGIPANNIIQEVQKVLL
DLDMQTIKDNQAKKLSGGQKRKLSLGIAVLGNPKILLLDEPTAGMDPCSRHIVWNLLKYR
KASRVTVFSTHFMDEADILADRKAVMSQGMLKCVGSSMFLKSKWGIGYRLSMYIDKYCAT
ESLSSLVKQHIPGATLLQQNDQQLVYSLPFKDMDKFSGLFSALDNHSNLGVISYGVSMTT
LEDVFLKLEVEAEIDQADYSVFTQQPLEEEMDSKSFDEMEQSLLILSETKASLMSTMSLW
KQQMYTIAKFHFFTLKRESKSVRSVLLLLLIFFTVQIFMFLVRHSFKNAVVPVKLVPDLY
FLKPGDKPHKYKTSLLLQNSTDSDISDLISFFTSQNIMVTMINDSDYVSVAPHSAALNVM
HSEKDYVFAAVFNSTMVYSLPILVNIVSNYYLYHLNVTETIQIWSTPFFQEITDIVFKIE
LYFQAALLGIIVTAMPPYFAMENAENHKIKAYTQLKLSGLLPSAYWIGQAVVDIPLFFII
LILMLGSLLAFHYGLYFYTVKFLAVVFCLIGYVPSVILFTYIASFTFKKILNTKEFWSFI
YSVAALACIAITEITFFMGYTIATILHYAFCIIIPIYPLLGCLISFIKISWKNVRKNVDT
YNPWDRLSVAVISPYLQCVLWIFLLQYYEKKYGGRSIRKDPFFRNLSTKSKNRKLPEPPN
NEDEDEDVKAERLKVKELMGCQCCEEKPSIMVSNLHKEYDDKKDFLLSRKVKKVATKYIS
FCVKKGEILGLLGPNGAGKSTIINILVGDIEPTSGQVFLGDYSSETSEDDNSLKCMGYCP
QINPLWPDTTLQEHFEIFGAIKGMSASDMKEVISRITHALDLKEHLQKTVKKLPAGIKRK
LCFALSMLGNPQITLLDEPSTGMDPKAKQHMWRAIRTAFKNRKRAAILTTHYMEEAEAVC
DRVAIMVSGQLRCIGTVQHLKSKFGKGYFLEIKLKDWIENLEVDRLQREIQYIFPNASRQ
ESFSSILAYKIPKEDVQSLSQSFFKLEEAKHAFAIEEYSFSQATLEQVFVELTKEQEEED
NSCGTLNSTLWWERTQEDRVVF
NT seq
4929 nt
NT seq
+upstream
nt +downstream
nt
atgtctactgcaattagggaggtaggagtttggagacagaccagaacacttctactgaag
aattacttaattaaatgcagaaccaaaaagagtagtgttcaggaaattctttttccacta
ttttttttattttggttaatattaattagcatgatgcatccaaataagaaatatgaagaa
gtgcctaatatagaactcaatcctatggacaagtttactctttctaatctgattcttgga
tatactccagtgactaatattacaagcagcatcatgcagaaagtgtctactgatcatcta
cctgatgtcataattactgaagaatatacaaatgaaaaagaaatgttaacatccagtctc
tctaagccgagcaactttgtaggtgtggttttcaaagactccatgtcctatgaacttcgt
ttttttcctgatatgattccagtatcttctatttatatggattcaagagctggctgttca
aaatcatgtgaggctgctcagtactggtcctcaggtttcacagttttacaagcatccata
gatgctgccattatacagttgaagaccaatgtttctctttggaaggagctggagtcaact
aaagctgttattatgggagaaactgctgttgtagaaatagatacctttccccgaggagta
attttaatatacctggttatagcattttcaccttttggatactttttggcaattcatatc
gtagcagaaaaagaaaaaaaaataaaagaatttttaaagataatgggacttcatgatact
gccttttggctttcctgggttcttctatatacaagtttaatttttcttatgtcccttctt
atggcagtcattgcaacagcttctttgttatttcctcaaagtagcagcattgtgatattt
ctgctttttttcctttatggattatcatctgtattttttgctttaatgctgacacctctt
tttaaaaaatcaaaacatgtgggaatagttgaattttttgttactgtggcttttggatgt
attggccttatgataatcctcatagaaagttttcccaaatcgttagtgtggcttttcagt
cctttctgtcactgtacttttgtgattggtattgcacaggtcatgcatttagaagatttt
aatgaaggtgcttcattttcaaatttgactgcaggcccatatcctctaattattacagtt
atcatgctcacacttaatagtatattctatgtcctcttggctgtctatcttgatcaagtc
attccaggggaatttggcttacggagatcatctttatattttctgaagccttcatattgg
tcaaagagcaaaagaaattatgaggagttatcagagggcaatgttaatggaaatattagt
tttagtgaaattattgagccagtttcttcagaatttgtaggaaaagaagccataagaatt
agtggtattcagaagacatacagaaagaagggtgaaaatgtggaggctttgagaaatttg
tcatttgacatatatgagggtcagattactgccttacttggccacagtggaacaggaaag
agtacattgatgaatattctttgtggactctgcccaccttctgatgggtttgcatctata
tatggacacagagtctcagaaatagatgaaatgtttgaagcaagaaaaatgattggcatt
tgtccacagttagatatacactttgatgttttgacagtagaagaaaatttatcaattttg
gcttcaatcaaagggataccagccaacaatataatacaagaagtgcagaaggttttacta
gatttagacatgcagactatcaaagataaccaagctaaaaaattaagtggtggtcaaaaa
agaaagctgtcattaggaattgctgttcttgggaacccaaagatactgctgctagatgaa
ccaacagctggaatggacccctgttctcgacatattgtatggaatcttttaaaatacaga
aaagccagtcgggtgacagtgttcagtactcatttcatggatgaagctgacattcttgca
gataggaaagctgtgatgtcacaaggaatgctgaaatgtgttggttcttcaatgttcctc
aaaagtaaatgggggatcggctaccgcctgagcatgtacatagacaaatattgtgccaca
gaatctctttcttcactggttaaacaacatatacctggagctactttattacaacagaat
gaccaacaacttgtgtatagcttgcctttcaaggacatggacaaattttcaggtttgttt
tctgccctagacaatcattcaaatttgggtgtcatttcttatggtgtttccatgacgact
ttggaagacgtatttttaaagctagaagttgaagcagaaattgaccaagcagattatagt
gtatttactcagcagccactggaggaagaaatggattcaaaatcttttgatgaaatggaa
cagagcttacttattctttctgaaaccaaggcttctctaatgagcaccatgagcctttgg
aaacaacagatgtatacaatagcaaagtttcatttctttaccttgaaacgtgaaagtaaa
tcagtgagatcagtgttgcttctgcttttaatttttttcacagttcagatttttatgttt
ttggttcgtcactcttttaaaaatgctgtggttcccgtcaaacttgttccagacttatat
tttctaaaacctggagacaaacctcataaatacaaaacaagtctgcttcttcaaaattct
actgactcagatatcagtgatcttattagctttttcacaagccagaacataatggtgacg
atgattaatgacagtgactatgtatccgtggctccccatagtgcggctttaaatgtgatg
cattcagaaaaggactatgtttttgcagctgttttcaacagtactatggtttattcttta
cctatattagtgaatatcgttagtaactactatctttatcatttaaatgtgactgaaacc
atccagatctggagtaccccattctttcaagaaattactgatatagtttttaaaattgag
ctgtattttcaagcagctttgcttggaatcattgttactgcaatgccaccttactttgcc
atggaaaatgcagagaatcataagatcaaagcttatactcaacttaaactttcaggtctt
ttgccatctgcatattggattggacaagctgttgttgatatccccttattttttatcatt
cttattttgatgctaggaagcttattggcatttcattatggattatatttttatactgta
aagttccttgctgtggttttttgccttattggttatgttccatcagttattctgttcact
tatattgcttctttcacctttaagaaaattttaaataccaaagaattctggtcatttatc
tattctgtggcagcgttggcttgtattgcaatcactgaaataactttctttatgggatac
acaattgcaactattcttcattatgccttttgtatcatcattccaatctatccacttcta
ggttgcctgatttctttcataaagatttcttggaagaatgtacgaaaaaatgtggacacc
tataatccatgggataggctttcagtagctgttatatcgccttacctgcagtgtgtactg
tggattttcctcttacaatactatgagaaaaaatatggaggcagatcaatacgaaaagat
ccctttttcagaaacctttcaacgaagtctaaaaataggaagcttccagaaccaccaaac
aatgaggatgaagatgaagatgtcaaagctgaaagactaaaggtcaaagagctgatgggt
tgccagtgttgtgaggagaaaccatccattatggtcagcaatttgcataaagaatatgat
gacaagaaagattttcttctttcaagaaaagtaaagaaagtggcaactaaatacatctct
ttctgtgtgaaaaaaggagagatcttaggactgttgggtccaaatggtgctggcaaaagc
acaattattaatattctggttggtgatattgaaccaacttcaggccaggtatttttagga
gattattcttcagagacaagtgaagatgataattcactgaagtgtatgggttactgtcct
cagataaaccctttgtggccagatactacattgcaggaacattttgaaatttttggagct
atcaaaggaatgagtgcaagtgacatgaaagaagtcataagtcgaataacacatgcactt
gatttaaaagaacatcttcagaagactgtaaagaaactacctgcaggaatcaaacgaaag
ttgtgttttgctctaagtatgctagggaatcctcagattactttgctagatgaaccatct
acaggtatggatcccaaagccaaacagcacatgtggcgagcaattcgaactgcatttaaa
aacagaaagcgggctgctattctgaccactcactatatggaggaggcagaggctgtctgt
gatcgagtagctatcatggtgtctgggcagttaagatgtatcggaacagtacaacatcta
aagagtaaatttggaaaaggctactttttggaaattaaattgaaggactggatagaaaac
ctagaagtagaccgccttcaaagagaaattcagtatattttcccaaatgcaagccgtcag
gaaagtttttcttctattttggcttataaaattcctaaggaagatgttcagtccctttca
caatctttttttaagctggaagaagctaaacatgcttttgccattgaagaatatagcttt
tctcaagcaacattggaacaggtttttgtagaactcactaaagaacaagaggaggaagat
aatagttgtggaactttaaacagcacactttggtgggaacgaacacaagaagatagagta
gtattttga
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integrated database retrieval system
