Pan troglodytes (chimpanzee): 456073
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Entry
456073 CDS
T01005
Symbol
CIC
Name
(RefSeq) protein capicua homolog isoform X14
KO
K20225
capicua transcriptional repressor
Organism
ptr
Pan troglodytes (chimpanzee)
Pathway
ptr05017
Spinocerebellar ataxia
Brite
KEGG Orthology (KO) [BR:
ptr00001
]
09160 Human Diseases
09164 Neurodegenerative disease
05017 Spinocerebellar ataxia
456073 (CIC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ptr03000
]
456073 (CIC)
Transcription factors [BR:
ptr03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
456073 (CIC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HMG_box
HMG_box_2
Motif
Other DBs
NCBI-GeneID:
456073
NCBI-ProteinID:
XP_001153776
Ensembl:
ENSPTRG00000011051
VGNC:
6618
UniProt:
K7BXD0
H2QGG0
LinkDB
All DBs
Position
20:45184628..45211932
Genome browser
AA seq
1608 aa
AA seq
DB search
MYSAHRPLMPASSAASRGLGMFVWTNVEPRSVAVFPWHSLVPFLAPSQPDPSVQPSEAQQ
PASHPVASNQSKEPAESAAVAHERPPGGTGSADPGRPPGATCPESPGPGPPHPLGVVESG
KGPPPTTEEEASGPPGEPRLDSETESDHDDAFLSIMSPEIQLPLPPGKRRTQSLSALPKE
RDSSSEKDGRSPNKREKDHIRRPMNAFMIFSKRHRALVHQRHPNQDNRTVSKILGEWWYA
LGPKEKQKYHDLAFQVKEAHFKAHPDWKWCNKDRKKSSSEAKPTSLGLAGGHKETRERSM
SETGTAAAPGVSSELLSVAAQTLLSSDTKAPGSSSCGAERLHTVGGPGSARPRAFSHSGV
HSLDGGEVDSQALQELTQMVSGPASYSGPKPSTQYGAPGPFAAPGEGGALAATGRPPLLP
TRASRSQRAASEDMTSDEERMVICEEEGDDDVIADDGFGTTDIDLKCKERVTDSESGDSS
GEDPEGNKGFGRKVFSPVIRSSFTHCRPPLDPEPPGPPDPPVAFGKGYGSAPSSSASSPA
SSSASAATSFSLGSGTFKAQESGQGSTAGPLRPPPPGAGGPATPSKATRFLPTDPATFRR
KRPESVGGLEPPGPSVIAAPPSGGGNILQTLVLPPNKEEQEGGGARVPSAPAPSLAYGAP
AAPLSRPAATMVTNVVRPVSSTPVPIASKPFPTSGRAEASPNDTAGARTEMGTGSRVPGG
SPLGVSLVYSDKKSAAATSPAPHLVAGPLLGTVGKAPATVTNLLVGTPGYGAPAPPAVQF
IAQGAPGGGTTAGSGAGAGSGPNGPVPLGILQPGALGKAGGITQVQYILPTLPQQLQVAP
APAPAPGTKAAAPSGPAPTTSIRFTLPPGTSTNGKVLAATAPTPGIPILQSVPSAPPPKA
QSVSPVQAPPPGGSAQLLPGKVLVPLAAPSMSVRGGGAGQPLPLVSPPFSVPVQNGAQPP
SKIIQLTPVPVSTPSGLVPPLSPATLPGPTSQPQKVLLPSSTRITYVQSAGGHALPLGTS
PASSQAGTVTSYGPTSSVALGFTSLGPSGPAFVQPLLSAGQAPLLAPGQVGVSPVPSPQL
PPACAAPGGPVITAFYSGSPAPTSSAPLAQPSQAPPSLVYTVATSTTPPAATILPKGPPA
PATATPAPTSPFPSATAGSMTYSLVAPKAQRPSPKAPQKVKAAIASIPVGSFEAGASGRP
GPAPRQPLEPGPVREPTALESELEGQPTPPAPPPLPETWTPTARSSPPLPPPAEERTSAK
GPETMASKFPSSSSDWRVPGQGLENRGEPPTPPSPAPAPAVAPGGSSESSSGRAAGDTPE
RKEAAGTGKKVKVRPPPLKKTFDSVDNRVLSEVDFEERFAELPEFRPEEVLPSPTLQSLA
TSPRAILGSYRKKRKNSTDLDSAPEDPTSPKRKMRRRSSCSSEPNTPKSAKCEGDIFTFD
RTGTEAEDVLGELEYDKVPYSSLRRTLDQRRALVMQLFQDHGFFPSAQATAAFQARYADI
FPSKVCLQLKIREVRQKIMQAATPTEQPPGAEAPLPVPPPTGTAAAPAPTPSPAGGPDPT
SPSSDSGTAQAAPPLPPPPESGPGQPGWEGAPQPSPPPPGPSTAATGR
NT seq
4827 nt
NT seq
+upstream
nt +downstream
nt
atgtattcggcccacaggcccctgatgcccgcgtccagcgcggcctcccgtggcctcggc
atgttcgtgtggacgaatgtggaacctcgctctgtggctgtgttcccttggcactcctta
gtccccttcctggcacccagccagcctgacccctccgtgcagccgagcgaggcccagcaa
cctgccagccacccagtggcctccaaccagagcaaagaacctgctgagtcggcagctgtt
gctcatgaacggccaccaggtgggacagggagtgctgaccctgggcggccccctggagcc
acatgccctgagagcccaggacccggacccccacaccctttgggggtggtggaatctggt
aagggtccgcctcccaccacggaggaggaggcctccggccccccaggagagccccggctg
gacagtgagacagagagtgaccatgatgatgccttcctctccatcatgtctcctgagatc
cagttgcctctaccgcccggaaaacgtcggacccagtccctcagtgccctacccaaggaa
cgggactcatcttctgagaaggatggacgcagccccaacaagcgggagaaggaccacatc
cggcggcccatgaatgccttcatgatcttcagcaagcggcaccgggccctggtccaccag
cgtcatcccaaccaggacaaccggaccgtcagcaagatcctgggcgagtggtggtatgcc
ctggggcccaaggagaagcagaagtaccacgacctggccttccaggtgaaggaggcccac
ttcaaggcccacccagattggaagtggtgcaacaaggaccgaaagaagtccagctcagag
gccaagcccacgagcctggggctggcaggagggcacaaggagacgcgggagcggagcatg
tcggagacgggcactgctgctgcccctggggtatcctctgagctcctgtccgttgcagcc
cagacactcctgagctcagacaccaaggctccggggagcagctcctgtggggcagaacgg
ctacacacagttgggggacctggctcagcccggccccgagctttctcccacagtggggta
cacagcctggacggcggagaagtagacagtcaggcgctacaggaactgacgcagatggtg
tctggccctgcatcgtactctggcccaaagccttctacccagtatggagctccaggaccc
tttgcagcccctggtgagggaggtgccttggcggccactgggcggcccccgctgctgccc
acgcgagcttctcgttctcagcgtgcggccagtgaggacatgacgagtgatgaggagcgc
atggtcatctgtgaggaggaaggggatgatgatgtcattgctgacgatggcttcggcacc
actgacattgatctcaagtgcaaggagcgggtgaccgacagcgagagtggggacagctct
ggggaggacccagagggcaacaagggctttggtcggaaggtgttttcacctgtgatccgt
tcctcctttacccactgccgccccccactggaccctgagcccccagggcccccggatcct
cctgtagcctttggcaaaggctatggttccgccccatcctcctctgcgtcctcgcctgct
tcctcctcagcctcggcagccacctccttctcactgggctcaggaaccttcaaggcccag
gagtctggtcagggcagcacagcgggccccctacggcccccaccccctggggctgggggt
ccagcgacaccttccaaggcaacccggttcctcccaacggatcctgccaccttccggcgc
aagagacctgaaagtgtgggtggcctggagccaccaggcccctcagtcattgcggcccct
cccagcggaggaggaaacatcctgcagacactggtgctgcccccaaacaaggaggagcaa
gagggcggcggagccagagtgccctccgcccccgccccatcactggcctacggggcccca
gcagctcccctgtcccgtcctgccgccaccatggtcaccaatgtggtgcggcctgtcagc
agcactcctgtgcccatcgcctctaagcccttccccacctctggccgggctgaggcgtct
ccaaatgacacagcaggtgccaggactgaaatgggcactgggtctcgggtgcctgggggc
tccccgctgggtgtcagcttagtgtattcggacaagaagtcggcagcagccacctcacca
gccccacacttggtggctggacccctgctgggcactgtggggaaggcgcctgccactgtc
actaacctactggtgggcaccccggggtatggggcccctgcgccccctgctgtccagttc
attgcccagggggcccctggtggtgggaccactgcgggctcaggagcaggtgctgggagt
ggccccaatgggccagtacccctgggcatcctgcaaccaggtgccctgggcaaggctggg
ggaatcacccaggtacagtacatcctgcccacgctgccccagcagcttcaggtggcacct
gccccagcaccagcccctgggaccaaggcagcggctcccagcggccctgcacccaccacc
agcatccgtttcaccctcccaccgggcacttccaccaacggcaaagtcctggccgccact
gcacccactcctggcatccccatcctgcagtctgtaccctccgccccaccccccaaagcc
cagtcagtttctcccgtgcaggccccgcccccgggtggctcagcccagctgctgcctggg
aaggtcctagtgcctctggccgcccctagcatgtcagtgcggggtggaggggccggccag
ccgctgccactggtgagcccgcccttctcagtacctgtgcagaatggtgcccagcccccc
agcaagatcatccagctgaccccggtgcctgtgagcacacccagcggcctggtgccgccc
ctgagcccagccacactccctggacccacctctcagcctcagaaggtcctgttgccctcc
tccaccagaatcacctatgtgcagtcagcgggcgggcacgcgctgcccctgggtaccagc
cctgcgtccagccaggctggaacagtcacctcgtacgggcccacgagctctgtagctcta
ggcttcacctcgctggggcccagcggccccgccttcgtgcagcccctgctctcagcaggc
caagccccactgctggctcccggtcaggtgggcgtgtcacctgtgcccagtccccagctg
ccgcctgcctgtgcagcccccggaggtcctgtcataacagcgttttactctggcagccct
gcacccacctcctcagcacccctggcccagccatcccaggcccccccaagcctggtctac
actgtggccaccagcacaaccccacctgcagccaccattctgcccaagggcccgccagcc
cctgccactgccaccccagccccgactagccctttccccagtgccacagcaggttccatg
acctacagcttagtggcccccaaggcccagcggcccagcccgaaggccccccagaaagtg
aaggcagccatcgccagcattcccgtggggtcctttgaggcaggtgcctctgggcggcct
ggccctgcaccccggcagcctctggagcctggcccagtccgagagccaactgccctagag
tctgagcttgaggggcagcccacaccaccagcccctccacccctgccagagacctggact
cccacggcccggagcagccccccactgcccccacctgctgaggagcggaccagcgccaag
ggccctgagaccatggccagcaaattccccagctcatcttcagactggcgcgtccctggg
cagggcctggagaatcgtggggagcctcccactcctcccagcccagccccagctccagcc
gtagcccctggcggcagcagcgagagcagcagtggacgggcagccggggacaccccggag
cgcaaggaggcggctggtactggcaagaaggtgaaggtgcggcccccgcccctgaagaag
acctttgactctgtggacaacagggtcctgtcagaagtggacttcgaagagcgctttgct
gagttgcctgagtttcggcctgaggaggtgctgccctcccccaccctgcagtctctggcc
acctcaccccgggccatcctgggctcttaccgcaagaagaggaagaactccacggacctg
gattcagcacccgaggaccccacctcgcccaagcgcaagatgagaagacgctccagctgc
agctcggagcccaacacccccaagagtgccaagtgcgagggggacatcttcacctttgac
cgtacaggtacagaagccgaggacgtgcttggggagctagagtatgacaaggtgccatac
tcctccctgcggcgcaccctagaccagcgccgggccctggtcatgcagctctttcaggac
catggcttcttcccgtcagcccaggccacagccgccttccaggcccgctatgcagacatc
tttccctccaaggtttgtctgcagttgaagatccgtgaggtgcgccagaagatcatgcag
gctgccactcccacggagcagccccctggagctgaggctcctctccctgtaccgcccccc
actggcactgctgctgcccctgcccccactcccagccccgcagggggccctgaccccacc
tcacccagctcggactctggcacggcccaggctgccccgccactgcctccacccccagag
tcgggacctggacagcctggctgggagggggctccccagccctcccccccacccccaggt
ccctccacagctgccacaggcaggtga
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