Pan troglodytes (chimpanzee): 456142
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Entry
456142 CDS
T01005
Symbol
SYMPK
Name
(RefSeq) symplekin isoform X1
KO
K06100
symplekin
Organism
ptr
Pan troglodytes (chimpanzee)
Pathway
ptr03015
mRNA surveillance pathway
ptr04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
ptr00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
456142 (SYMPK)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
456142 (SYMPK)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ptr03021
]
456142 (SYMPK)
03019 Messenger RNA biogenesis [BR:
ptr03019
]
456142 (SYMPK)
Transcription machinery [BR:
ptr03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
456142 (SYMPK)
Messenger RNA biogenesis [BR:
ptr03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage stimulation factor (CSTF) complex
456142 (SYMPK)
U7-dependent histone pre-mRNA processing factors
456142 (SYMPK)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Symplekin_C
SYMPK_PTA1_N
PDS5
Cnd1
Cohesin_HEAT
Motif
Other DBs
NCBI-GeneID:
456142
NCBI-ProteinID:
XP_009434123
Ensembl:
ENSPTRG00000011169
VGNC:
2240
UniProt:
H2QGM1
A0A6D2XDF2
LinkDB
All DBs
Position
20:complement(48777370..48826319)
Genome browser
AA seq
1352 aa
AA seq
DB search
MEAGRMPLARDEAWAGSGCALDSISRRPWVCGACAPFPATNGRWRRRRRRRRRSVGRGTA
EGARGERRPEPRDKLTAAMASGSGDSVTRRSVASQFFTQEEGPGIDGMTTSERVVDLLNQ
AALITNDSKITVLKQVQELIINKDPTLLDNFLDEIIAFQADKSIEVRKFVIGFIEEACKR
DIELLLKLIANLNMLLRDENVNVVKKAILTMTQLYKVALQWMVKSRVISELQEACWDMVS
AMAGDIILLLDSDNDGIRTHAIKFVEGLIVTLSPRMADSEIPRRQEHDISLDRIPRDHPY
IQYNVLWEEGKAALEQLLKFMVHPAISSINLTTALGSLANIARQRPMFMSEVIQAYETLH
ANLPPTLAKSQVSSVRKNLKLHLLSVLKHPASLEFQAQITTLLVDLGTPQAEIARNMPSS
KDTRKRPRDDSDSTLKKMKLEPNLGEDDEDKDLEPGPSGTSKASAQISGQSDTDITAEFL
QPLLTPDNVANLVLISMVYLPEAMPASFQAIYTPVESAGTEAQIKHLARLMATQMTAAGL
GPGVEQTKQCKEEPKEEKVVKTESVLIKRRLSAQGQAISVVGSLSSMSPLEEEAPQAKRR
PEPIIPVTQPRLAGAGGRKKIFRLSDVLKPLTDAQVEAMKLGAVKRILRAEKAVACSGAA
QVRIKILASLVTQFNSGLKAEVLSFILEDVRARLDLAFAWLYQEYNAYLAAGASGSLDKY
EDCLIRLLSGLQEKPDQKDGIFTKVVLEAPLITESALEVVRKYCEDESRTYLGMSTLRDL
IFKRPSRQFQYLHVLLDLSSHEKDKVRSQALLFIKRMYEKEQLREYVEKFALNYLQLLVH
PNPPSVLFGADKDTEVAAPWTEETVKQCLYLYLALLPQNHKLIHELAAVYTEAIADIKRT
VLRVIEQPIRGMGMNSPELLLLVENCPKGAETLVTRCLHSLTDKVPPSPELVKRVRDLYH
KRLPDVRFLIPVLNGLEKKEVIQALPKLIKLNPIVVKEVFNRLLGTQHGEGNSALSPLNP
GELLIALHNIDSVKCDMKSIIKATNLCFAERNVYTSEVLAVVMQQLMEQSPLPMLLMRTV
IQSLTMYPRLGGFVMNILSRLIMKQVWKYPKVWEGFIKCCQRTKPQSFQVILQLPPQQLG
AVFDKCPELREPLLAHVRSFTPHQQAHIPNSIMTILEASGKQEPEAKEAPAGPLEEDDLE
PLTLAPAPAPRPPQDLIGLRLAQEKALKRQLEEEQKLKPGGVGAPSSSSPSPSPSARPGP
PPSEEAMDFREEGPECETPGIFISMDDDSGLTEAALLDSSLEGPLPKETAAGGLTLKEER
SPQTLAPIGEDAVKTPSPAAEDAREPEAKGNS
NT seq
4059 nt
NT seq
+upstream
nt +downstream
nt
atggaggcgggcagaatgccgctcgcacgggacgaggcatgggcggggtcgggctgtgct
ctggactccatttcccggcggccctgggtttgtggcgcgtgcgcaccgttcccggcgacg
aacggaagatggcggcggcggcggcggcggcggcggcggagtgtaggaagaggcactgct
gagggggcgcgaggggaacggaggccagagccgcgggacaagctgacagcagccatggcg
agtggcagtggagacagcgtcacccgtcggagcgtggcatcacagtttttcactcaagag
gaggggccgggcatcgatggcatgaccacctcagagagggtggtggatcttctgaaccag
gcggcgctgatcaccaatgactcaaagatcacagtgctcaaacaggtccaggagctgatc
atcaacaaagaccccacactactggacaacttcctggatgagatcatcgcattccaagca
gacaagtcaatcgaagtgcgaaaatttgtcatcggcttcatcgaggaggcatgcaagcga
gacattgagttgctgctgaaactcattgcaaacctcaacatgctcttgagggacgagaat
gtgaacgtggtgaagaaggctatcctcaccatgacccagctctacaaggtggccctgcag
tggatggtaaagtcacgggtcattagcgagctacaggaggcctgctgggacatggtatct
gccatggcgggggacatcatcctgctattggactctgacaatgacggcatccgcacccac
gccatcaagtttgtggagggcctcattgtcaccctgtcaccccgcatggctgactcagag
ataccccgacgccaggagcatgatatcagcctggaccgcatccctcgtgaccacccctac
atccagtacaacgtgctatgggaagagggcaaggccgccttggagcagctgcttaagttc
atggtgcaccctgccatctcctccatcaacctgaccacagcgctgggctccctcgccaat
atcgcccgccagagacccatgttcatgtctgaggtgatccaggcctatgaaactctgcat
gccaacctgcccccgacgctggccaaatcgcaggtgagcagcgtgcgtaagaatctgaag
ctgcacctgttgagtgtactgaagcacccggcttccttggagttccaggcccagatcacc
accctgctggtggacctgggcacacctcaggccgagatcgcccgcaacatgccgagcagc
aaggacacccgcaagcggccccgcgatgactcggactccacactcaagaagatgaagctg
gagcccaacctgggggaggacgatgaggacaaagacttggagccaggcccatcggggacc
tcgaaggcctcagcgcagatctccggccagtcagacacggacatcacagctgagttcctg
cagcctctgctgacgcctgataatgtggctaatctggtcctcatcagcatggtgtaccta
cccgaggccatgccagcctccttccaggccatctacacccccgtggagtcagcaggcacg
gaagcccagatcaagcacctggctcggctcatggccacacagatgacagctgccggactg
ggaccaggtgtagagcagaccaaacagtgcaaggaggagcccaaggaggagaaggtggtg
aagacagagagcgtcctgatcaagcggcgcctgtcagcccagggccaagccatctcggtg
gtgggttccctgagctccatgtcccccctggaggaagaggcaccgcaggccaagaggagg
ccagagcccattatccctgtcactcagccccggctggcaggcgccggtgggcgcaagaaa
attttccgtctcagcgacgtgctgaagccccttaccgatgcccaggtggaagccatgaag
ctgggcgctgtgaagcggatcctgcgggctgagaaggctgtggcctgcagcggggcagcc
caggtccgcataaagatcctggccagcctggtgacacagttcaactcgggcctgaaggcg
gaggtcctgtccttcatcctggaggatgtgcgggcccgcctggacctggccttcgcctgg
ctctaccaggagtacaacgcctacctggccgcaggtgcctcgggctccctggacaagtat
gaggactgcctcatccgcctgttgtctggcctgcaggagaaaccagaccagaaggatggg
atcttcaccaaggttgtgctggaggcgccactcatcacagagagtgccctggaggtggtc
cgcaagtactgcgaggatgagagtcgcacctatctgggcatgtccacacttcgagacctg
atcttcaagcgcccgtcccgccagttccagtacctgcatgtcctcctcgacctcagctcc
catgagaaggacaaggtgcgctcccaggccctgctgttcatcaaacgcatgtatgagaag
gagcagctgcgggagtatgtggagaaatttgccctcaactacctgcagctcctggtgcac
cccaacccaccgtctgtgctgtttggagccgacaaggacacagaggtggcagcaccctgg
acggaggagacagtgaagcagtgtctgtacctctacctggccctcctgcctcagaaccac
aagctgatccacgaactggcggccgtgtacactgaagccatcgccgacatcaagcggacg
gtgctgagggtcattgagcagccgatccgaggaatgggcatgaactccccggagctgctc
ctgctggtggaaaattgtcccaagggagcagagacactggtcacgcgatgtctgcacagc
ctcacagacaaagtcccaccctccccagagctggtgaagcgggtccgggatctctaccac
aagcgactgccagacgtccgctttctcatcccggtgctcaatgggctggagaagaaagag
gtgatccaggccctgcctaaactcatcaaactcaaccccatcgtggtgaaggaagtcttc
aaccgcctgctgggcacccagcatggtgagggaaactcagccttgtccccgctgaaccct
ggagagctcctgatcgcattacacaacatcgactccgtgaagtgtgacatgaaatccatc
atcaaagccaccaacctgtgctttgcggagcggaacgtgtacacgtcagaggtgctggcc
gtggtgatgcagcagctgatggagcagagccccctgcccatgctgctcatgaggaccgtc
atccagtccctgaccatgtacccccgcctggggggcttcgtcatgaacatcctgtcccgc
ctcatcatgaagcaggtgtggaagtaccccaaggtgtgggagggcttcatcaagtgctgc
cagcgcacaaagccccagagcttccaggtcatcctgcagctgccgccccagcagctggga
gccgtctttgacaagtgcccggagctccgggagcccctgctggcccatgtccgctccttc
accccccaccagcaagctcacatccctaactccatcatgaccatcttggaggccagcggc
aagcaggagccagaggccaaggaggcgcctgcggggcccttggaggaggatgatctggag
cccctgaccttggccccggccccagcaccccggccccctcaggacctcatcggcctacga
ctggcccaggagaaggccttaaagcggcagctggaggaggaacagaagctgaagccggga
ggagtgggagccccctcctcttcctccccctctccctctccgtcggcccggccgggcccg
cccccgtctgaggaagccatggatttccgggaggaggggcctgagtgcgagaccccgggc
atcttcatcagcatggatgacgactcggggctgaccgaggccgcgctgttggactctagt
ctcgagggccccctacccaaggagacggcagcgggcgggctgaccttgaaggaggagcgg
agcccccagaccctcgcacctattggagaagatgctgtgaagacccccagcccggctgcc
gaggacgccagggaacccgaggccaaggggaacagctga
DBGET
integrated database retrieval system
