KEGG   Pan troglodytes (chimpanzee): 456867
Entry
456867            CDS       T01005                                 
Symbol
NDC1
Name
(RefSeq) nucleoporin NDC1 isoform X4
  KO
K14315  nucleoporin NDC1
Organism
ptr  Pan troglodytes (chimpanzee)
Pathway
ptr03013  Nucleocytoplasmic transport
ptr05014  Amyotrophic lateral sclerosis
Brite
KEGG Orthology (KO) [BR:ptr00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    456867 (NDC1)
 09160 Human Diseases
  09164 Neurodegenerative disease
   05014 Amyotrophic lateral sclerosis
    456867 (NDC1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:ptr03019]
    456867 (NDC1)
Messenger RNA biogenesis [BR:ptr03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Nuclear pore complex
     456867 (NDC1)
SSDB
Motif
Pfam: Ndc1_Nup
Other DBs
NCBI-GeneID: 456867
NCBI-ProteinID: XP_003308161
Ensembl: ENSPTRG00000000757
VGNC: 11556
LinkDB
Position
1:177154146..177226052
AA seq 559 aa
MHSFIHAAMGMVMAWCAAVITQGQYSFLVVPCTGTNSFGSPAAQTCLNEYHLFFLLAGAF
MGYSYSLLYFVNNMNYLPFPIIQQYKFLRFRRSLLLLVKHSCVESLFLVRNFCILYYFLG
YIPKAWISTAMNLHIDEQVHRPLDTVSGLLNLSLLYHVWLCGVFLLTTWYVSWILFKIYA
TEAHVFPVQPPFAEGSDECLPKVLNSNPPPIIKYLALQDLMLLSQYSPSRRQEVFSLSQP
GGHPHNWTAISRECLNLLNGMTQKLILYQEAAAANGRVSSSYPVEPKKLNSPEETTFQTP
KSSQMPRPSVPPLVKTSLFSSKLSTPDVVSPFGTPFGSSVMNRMAGIFDVNTCYGSPQSP
QLIRRGPRLWTSASDQQMTEFSNTSPSTSISAEGKTMRQPSVIYSWIQNKREQIKNFLSK
RVLIMYFFSKHPEASIQAVFSDAQMHIWALEGLSHLVAASFTEDRFGVVQTTLPAILNTL
LTLQEAVDKYFKLPHASSKPPRTSGSLVDTSYKTLRFAFRASLKTAIYRITTTFGEHLNA
VQASAEHQKRLQQFLEFKE
NT seq 1680 nt   +upstreamnt  +downstreamnt
atgcactcatttattcatgctgcaatgggaatggtgatggcctggtgtgctgcagtgata
acccagggccagtacagttttcttgtggttccctgcactggtactaacagctttggtagc
cctgctgcgcaaacctgcttaaatgaatatcatctttttttcctactggctggagcattt
atgggctatagctatagcctcctgtattttgttaacaacatgaactatcttccatttccc
atcatacagcaatacaagttcttgcgttttaggagatctctgctcttattagttaaacac
agttgtgtggaatcactgttcctggttagaaatttctgcattttatattattttcttggc
tatattcccaaagcttggattagcactgctatgaaccttcacatagatgagcaggttcat
aggccacttgatacagtgagtggcctcttaaatctctcgttactctaccatgtctggctg
tgtggtgtctttctcctgacgacttggtatgtctcatggatactcttcaaaatctatgcc
acagaggctcatgtgtttcctgttcaaccaccatttgcagaagggtcagatgagtgcctt
ccaaaagtgttaaatagcaatcctccccccatcataaagtatttagccttgcaggacctg
atgttgctttctcagtattctccttcacgaagacaagaagtttttagcctcagccaacca
ggtggacatccccacaattggacagccatttcaagggagtgtttgaatcttttaaatggt
atgactcagaaactgattctctatcaagaagctgctgctgcgaatgggagagtgtcttca
tcttacccagtggaacctaagaaattaaattctccagaagaaactacttttcagacacca
aaatctagccagatgcctcggccttcagtgccaccattagttaaaacatcactgttttct
tcaaaattatctacacctgatgttgtgagcccatttgggaccccatttggctctagtgta
atgaatcggatggctggaatttttgatgtaaacacctgctatgggtcaccgcaaagtcct
cagctaataagaagggggccaagattgtggacatcagcttctgatcagcaaatgactgaa
ttttctaatacttctccatctacctctattagtgctgagggtaagacaatgagacaaccc
agtgtgatttattcatggattcagaataaacgtgaacagattaagaatttcttgtcaaaa
cgggtgctgataatgtattttttcagtaagcacccagaggcctccattcaggctgttttt
tcagatgcccaaatgcatatttgggcattagaaggtctgtcgcacttagtagcagcatca
tttacagaggatagatttggagttgtccagactacactaccagctatccttaatactttg
ttgacgctgcaagaggcagtcgacaagtactttaagcttcctcatgcttccagtaaacca
ccccggacttcaggaagccttgtggacacttcatataaaacgttaagatttgcattcaga
gcatcactgaaaactgccatctatcgaataactactacatttggtgaacatctgaatgct
gtgcaagcatctgcagaacatcagaaaagacttcaacagttcttggagttcaaagaatag

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