Pan troglodytes (chimpanzee): 456867
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Entry
456867 CDS
T01005
Symbol
NDC1
Name
(RefSeq) nucleoporin NDC1 isoform X4
KO
K14315
nucleoporin NDC1
Organism
ptr
Pan troglodytes (chimpanzee)
Pathway
ptr03013
Nucleocytoplasmic transport
ptr05014
Amyotrophic lateral sclerosis
Brite
KEGG Orthology (KO) [BR:
ptr00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
456867 (NDC1)
09160 Human Diseases
09164 Neurodegenerative disease
05014 Amyotrophic lateral sclerosis
456867 (NDC1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ptr03019
]
456867 (NDC1)
Messenger RNA biogenesis [BR:
ptr03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
456867 (NDC1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ndc1_Nup
Motif
Other DBs
NCBI-GeneID:
456867
NCBI-ProteinID:
XP_003308161
Ensembl:
ENSPTRG00000000757
VGNC:
11556
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All DBs
Position
1:177154146..177226052
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AA seq
559 aa
AA seq
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MHSFIHAAMGMVMAWCAAVITQGQYSFLVVPCTGTNSFGSPAAQTCLNEYHLFFLLAGAF
MGYSYSLLYFVNNMNYLPFPIIQQYKFLRFRRSLLLLVKHSCVESLFLVRNFCILYYFLG
YIPKAWISTAMNLHIDEQVHRPLDTVSGLLNLSLLYHVWLCGVFLLTTWYVSWILFKIYA
TEAHVFPVQPPFAEGSDECLPKVLNSNPPPIIKYLALQDLMLLSQYSPSRRQEVFSLSQP
GGHPHNWTAISRECLNLLNGMTQKLILYQEAAAANGRVSSSYPVEPKKLNSPEETTFQTP
KSSQMPRPSVPPLVKTSLFSSKLSTPDVVSPFGTPFGSSVMNRMAGIFDVNTCYGSPQSP
QLIRRGPRLWTSASDQQMTEFSNTSPSTSISAEGKTMRQPSVIYSWIQNKREQIKNFLSK
RVLIMYFFSKHPEASIQAVFSDAQMHIWALEGLSHLVAASFTEDRFGVVQTTLPAILNTL
LTLQEAVDKYFKLPHASSKPPRTSGSLVDTSYKTLRFAFRASLKTAIYRITTTFGEHLNA
VQASAEHQKRLQQFLEFKE
NT seq
1680 nt
NT seq
+upstream
nt +downstream
nt
atgcactcatttattcatgctgcaatgggaatggtgatggcctggtgtgctgcagtgata
acccagggccagtacagttttcttgtggttccctgcactggtactaacagctttggtagc
cctgctgcgcaaacctgcttaaatgaatatcatctttttttcctactggctggagcattt
atgggctatagctatagcctcctgtattttgttaacaacatgaactatcttccatttccc
atcatacagcaatacaagttcttgcgttttaggagatctctgctcttattagttaaacac
agttgtgtggaatcactgttcctggttagaaatttctgcattttatattattttcttggc
tatattcccaaagcttggattagcactgctatgaaccttcacatagatgagcaggttcat
aggccacttgatacagtgagtggcctcttaaatctctcgttactctaccatgtctggctg
tgtggtgtctttctcctgacgacttggtatgtctcatggatactcttcaaaatctatgcc
acagaggctcatgtgtttcctgttcaaccaccatttgcagaagggtcagatgagtgcctt
ccaaaagtgttaaatagcaatcctccccccatcataaagtatttagccttgcaggacctg
atgttgctttctcagtattctccttcacgaagacaagaagtttttagcctcagccaacca
ggtggacatccccacaattggacagccatttcaagggagtgtttgaatcttttaaatggt
atgactcagaaactgattctctatcaagaagctgctgctgcgaatgggagagtgtcttca
tcttacccagtggaacctaagaaattaaattctccagaagaaactacttttcagacacca
aaatctagccagatgcctcggccttcagtgccaccattagttaaaacatcactgttttct
tcaaaattatctacacctgatgttgtgagcccatttgggaccccatttggctctagtgta
atgaatcggatggctggaatttttgatgtaaacacctgctatgggtcaccgcaaagtcct
cagctaataagaagggggccaagattgtggacatcagcttctgatcagcaaatgactgaa
ttttctaatacttctccatctacctctattagtgctgagggtaagacaatgagacaaccc
agtgtgatttattcatggattcagaataaacgtgaacagattaagaatttcttgtcaaaa
cgggtgctgataatgtattttttcagtaagcacccagaggcctccattcaggctgttttt
tcagatgcccaaatgcatatttgggcattagaaggtctgtcgcacttagtagcagcatca
tttacagaggatagatttggagttgtccagactacactaccagctatccttaatactttg
ttgacgctgcaagaggcagtcgacaagtactttaagcttcctcatgcttccagtaaacca
ccccggacttcaggaagccttgtggacacttcatataaaacgttaagatttgcattcaga
gcatcactgaaaactgccatctatcgaataactactacatttggtgaacatctgaatgct
gtgcaagcatctgcagaacatcagaaaagacttcaacagttcttggagttcaaagaatag
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