Pan troglodytes (chimpanzee): 457065
Help
Entry
457065 CDS
T01005
Symbol
COL11A1
Name
(RefSeq) collagen alpha-1(XI) chain isoform X2
KO
K19721
collagen type V/XI/XXIV/XXVII, alpha
Organism
ptr
Pan troglodytes (chimpanzee)
Pathway
ptr04820
Cytoskeleton in muscle cells
ptr04974
Protein digestion and absorption
Brite
KEGG Orthology (KO) [BR:
ptr00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
457065 (COL11A1)
09150 Organismal Systems
09154 Digestive system
04974 Protein digestion and absorption
457065 (COL11A1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
ptr00536
]
457065 (COL11A1)
Glycosaminoglycan binding proteins [BR:
ptr00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
457065 (COL11A1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Collagen
COLFI
Laminin_G_2
Laminin_G_3
Laminin_G_1
Motif
Other DBs
NCBI-GeneID:
457065
NCBI-ProteinID:
XP_001139974
Ensembl:
ENSPTRG00000001017
VGNC:
10666
UniProt:
A0A2I3TI23
A0A6D2XKT8
LinkDB
All DBs
Position
1:complement(101691200..101923045)
Genome browser
AA seq
1818 aa
AA seq
DB search
MEPWSSRWKTKRWLWDFTVTTLALTFLFQAREVRGAAPVDVLKALDFHNSPEGISKTTGF
CTNRKNSKGSDTAYRVSKQAQLSAPTKQLFPGGTFPEDFSILFTVKPKKGIQSFLLSIYN
EHGIQQIGVEVGRSPVFLFEDHTGKPAPEDYPLFRTVNIADGKWHRVAISVEKKTVTMIV
DCKKKTTKPLDRSERAIVDTNGITVFGTRILDEEVFEGDIQQFLITGDPKAAYDYCEHYS
PDCDSSAPKAAQAQEPQIDEKKKSNFKKKTRTVATNSKEKSKKFTPPKSEKFSSKKKKSY
QASAKAKLGVKANIVDDFQEYNYGTMESYQTEAPRRVSGTNEPNPVEEIFTEEYLTGEDY
DSQRKNSEDTLYENKEIDGRDSDLLVDGDLGEYDFYEYKEYEDKPTSPPNEEFGPGVPAE
TDITETSINGHGAYGEKGQKGEPAVVEPGMLVEGPPGPAGPAGIMGPPGLQGPTGPPGDP
GDRGPPGRPGLPGADGLPGPPGTMLMLPFRYGGDGSKGPTISAQEAQAQAILQQARIALR
GPPGPMGLTGRPGPVGGPGSSGAKGESGDPGPQGPRGVQGPPGPTGKPGKRGRPGADGGR
GMPGEPGAKGDRGFDGLPGLPGDKGHRGERGPQGPPGPPGDDGMRGEDGEIGPRGLPGEA
GPRGLLGPRGTPGAPGQPGMAGVDGPPGPKGNMGPQGEPGPPGQQGNPGPQGLPGPQGPI
GPPGEKGPQGKPGLAGLPGADGPPGHPGKEGQSGEKGALGPPGPQGPIGYPGPRGVKGAD
GVRGLKGSKGEKGEDGFPGFKGDMGLKGDRGEVGQIGPRGEDGPEGPKGRAGPTGDPGPS
GQAGEKGKLGVPGLPGYPGRQGPKGSTGFPGFPGANGEKGARGVAGKPGPRGQRGPTGPR
GSRGARGPTGKPGPKGTSGGDGPPGPPGERGPQGPQGPVGFPGPKGPPGPPGKDGLPGHP
GQRGETGFQGKTGPPGPGGVVGPQGPTGETGPIGERGHPGPPGPPGEQGLPGAAGKEGAK
GDPGPQGISGKDGPAGLRGFPGERGLPGAQGAPGLKGGEGPQGPPGPVGSPGERGSAGTA
GPIGLPGRPGPQGPPGPAGEKGAPGEKGPQGPAGRDGVQGPVGLPGPAGPAGSPGEDGDK
GEIGEPGQKGSKGDKGENGPPGPPGLQGPVGAPGIAGGDGEPGPRGQQGMFGQKGDEGAR
GFPGPPGPIGLQGLPGPPGEKGENGDVGPMGPPGPPGPRGPQGPNGADGPQGPPGSVGSV
GGVGEKGEPGEAGNPGPPGEAGVGGPKGERGEKGEAGPPGAAGPPGAKGPPGDDGPKGNP
GPVGFPGDPGPPGEPGPAGQDGVGGDKGEDGDPGQPGPPGPSGEAGPPGPPGKRGPPGAA
GAEGRQGEKGAKGEAGAEGPPGKTGPVGPQGPAGKPGPEGLRGIPGPVGEQGLPGAAGQD
GPPGPMGPPGLPGLKGDPGSKGEKGHPGLIGLIGPPGEQGEKGDRGLPGTQGSPGAKGDG
GIPGPAGPLGPPGPPGLPGPQGPKGNKGSTGPAGQKGDSGLPGPPGPPGPPGEVIQPLPI
LSSKKTRRHTEGMQADADDNILDYSDGMEEIFGSLNSLKQDIEHMKFPMGTQTNPARTCK
DLQLSHPDFPDGEYWIDPNQGCSGDSFKVYCNFTSGGETCIYPDKKSEGVRISSWPKEKP
GSWFSEFKRGKLLSYLDVEGNSINMVQMTFLKLLTASARQNFTYHCHQSAAWYDVSSGSY
DKALRFLGSNDEEMSYDNNPFIKALYDGCASRKGYEKTVIEINTPKIDQVPIVDVMINDF
GDQNQKFGFEVGPVCFLG
NT seq
5457 nt
NT seq
+upstream
nt +downstream
nt
atggagccgtggtcctctaggtggaaaacgaaacggtggctctgggatttcaccgtaaca
accctcgcattgaccttcctcttccaagctagagaggtcagaggagctgctccagttgat
gtactaaaagcactagattttcacaattctccagagggaatatcaaaaacaacgggattt
tgcacaaacagaaagaattctaaaggctcagatactgcttacagagtttcaaagcaagca
caactcagtgccccaacaaaacagttatttccaggtggaactttcccagaagacttttca
atattatttacagtaaaaccaaaaaaaggaattcagtctttccttttatctatatataat
gagcatggtattcagcaaattggtgttgaggttgggagatcacctgtttttctgtttgaa
gaccacactggaaaacctgccccagaagactatcccctcttcagaactgttaacatcgct
gatgggaagtggcatcgggtggcaatcagcgtggagaagaaaactgtgacaatgattgtt
gattgtaagaagaaaaccacgaaaccacttgatagaagtgagagagcaattgttgatacc
aatggaatcacggtttttggaacaaggattttggatgaagaagtttttgagggggacatc
cagcagtttttgatcacaggtgatcccaaggcagcatatgactactgtgagcattatagt
ccagactgtgactcttcagcacccaaggctgctcaagctcaggaacctcagatagatgag
aaaaagaaatccaatttcaaaaagaagacgaggacagtggctactaactcaaaggaaaaa
tccaaaaagtttacaccccccaaatctgaaaaattttcatccaagaagaagaaaagttat
caagcatcagcaaaagccaaactaggggtaaaggcaaatatcgttgatgattttcaagaa
tacaactatggaacaatggaaagttaccagacagaagctcctaggcgtgtttctgggaca
aatgagccaaatccagttgaagaaatatttactgaagaatatctaacgggagaggattat
gattcccagaggaaaaattctgaggatacactatatgaaaacaaagaaatagacggcagg
gactctgatcttctggtagatggagatttaggcgaatatgatttttatgaatataaagaa
tatgaagataaaccaacaagcccccccaatgaagaatttggtccaggtgtaccagcagaa
actgatattacagaaacaagcataaatggccatggtgcatatggagagaaaggacagaaa
ggagaaccagcagtggttgagcctggtatgcttgtcgaaggaccaccaggaccagcagga
cctgcaggtattatgggtcctccaggtctacaaggccccactggaccccctggtgaccct
ggcgataggggccccccaggacgtcctggcttaccaggggctgatggtttacctggtcct
cctggtactatgttgatgttaccgttccgttatggtggtgatggttccaaaggaccaacc
atctctgctcaggaagctcaggctcaagctattcttcagcaggctcggattgctctgaga
ggcccacctggcccaatgggtctaactggaagaccaggtcctgtgggggggcctggttca
tctggggccaaaggtgagagtggtgatccaggtcctcagggccctcgaggcgtccagggt
ccccctggtccaacgggaaaacctggaaaaaggggtcgtccaggtgcagatggaggaaga
ggaatgccaggagaacctggggcaaagggagatcgagggtttgatggacttccgggtctg
ccaggtgacaaaggtcacaggggtgaacgaggacctcaaggtcctccaggtcctcctggt
gatgatggaatgaggggagaagatggagaaattggaccaagaggtcttccaggtgaagct
ggcccacgaggtttgctgggtccaaggggaactccaggagctccagggcagcctggtatg
gcaggtgtagatggccccccaggaccaaaagggaacatgggtccccaaggggagcctggg
cctccaggtcaacaagggaatccaggacctcagggtcttcctggtccacaaggcccaatt
ggtcctcctggtgaaaaaggaccacaaggaaaaccaggacttgctggacttcctggtgct
gatgggcctcctggtcatcctgggaaagaaggccagtctggagaaaagggggctctgggt
cctcctggtccacaaggtcctattggctacccgggcccccggggagtaaagggagcagat
ggtgtcagaggtctcaagggatctaaaggtgaaaagggtgaagatggttttccaggattc
aaaggtgacatgggtctaaaaggtgacagaggagaagttggtcaaattggcccaagaggg
gaagatggccctgaaggacccaaaggtcgagcaggcccaactggagacccaggtccttca
ggtcaagcaggagaaaagggaaaacttggagttccaggattaccaggatatccaggaaga
caaggtccaaagggttccactggattccctgggtttccaggtgccaatggagagaaaggt
gcacggggagtagctggcaaaccaggccctcggggtcagcgtggtccaacgggtcctcga
ggttcaagaggtgcaagaggtcccactgggaaacctgggccaaagggcacttcaggtggc
gatggccctcctggccctccaggtgaaagaggtcctcaaggacctcagggtccagttgga
ttccctggaccaaaaggccctcctggaccacctgggaaggacgggctgccaggacaccct
gggcaacgtggggagactggatttcaaggcaagactggccctcctgggccagggggagtg
gttggaccacagggaccaaccggtgagactggtccaataggggaacgtgggcatcctggc
cctcctggccctcctggtgagcaaggtcttcctggtgctgcaggaaaagaaggtgcaaag
ggtgatccaggtcctcaaggtatctcagggaaagatggaccagcaggattacgtggtttc
ccaggggaaagaggtcttcctggagctcagggtgcacctggactgaaaggaggggaaggt
ccccagggcccaccaggtccagttggctcaccaggagaacgtgggtcagcaggtacagct
ggcccaattggtttaccagggcgcccgggacctcagggtcctcctggtccagctggagag
aaaggcgctcctggagaaaaaggtccccaagggcctgcagggagagatggagttcaaggt
cctgttggtctcccagggccagctggtcctgccggctcccctggggaagacggagacaag
ggtgaaattggtgagccaggacaaaaaggcagcaagggtgacaagggagaaaatggccct
cccggtcccccaggtcttcaaggaccagttggtgcccctggaattgctggaggtgatggt
gaaccaggtcctagaggacagcaggggatgtttgggcaaaaaggtgatgagggtgccaga
ggcttccctggacctcctggtccaataggtcttcagggtctgccaggcccacctggtgaa
aaaggtgaaaatggggatgttggtcccatggggccacctggtcctccaggcccaagaggc
cctcaaggtcccaatggagctgatggaccacaaggacccccagggtctgttggttcagtt
ggtggtgttggagaaaagggtgaacctggagaagcagggaacccagggcctcctggggaa
gcaggtgtaggcggtcccaaaggagaaagaggagagaaaggggaagctggtccacctgga
gctgctggacctcctggtgccaaggggccaccaggtgatgatggccctaagggtaacccg
ggtcctgttggttttcctggagatcctggtcctcctggggaacctggccctgcaggtcaa
gatggtgttggtggtgacaagggtgaagatggagatcctggtcaaccgggtcctcctggc
ccatctggtgaggctggcccaccaggtcctcctggaaaacgaggtcctcctggagctgca
ggtgcagagggaagacaaggtgaaaaaggtgctaagggggaagcaggtgcagaaggtcct
cctggaaaaaccggcccagtcggtcctcagggacctgcaggaaagcctggtccagaaggt
cttcggggcatccctggtcctgtgggagaacaaggtctccctggagctgcaggccaagat
ggaccacctggtcctatgggacctcctggcttacctggtctcaaaggtgaccctggctcc
aagggtgaaaagggacatcctggtttaattggcctgattggtcctccaggagaacaaggg
gaaaaaggtgaccgagggctccctggaactcaaggatctccaggagcaaaaggggacggg
ggaattcctggtcctgctggtcccttaggtccacctggtcctccaggcttaccaggtcct
caaggcccaaagggtaacaaaggctctactggacccgctggccagaaaggtgacagtggt
cttccagggcctcctgggcctccaggtccacctggtgaagtcattcagcctttaccaatc
ttgtcctccaaaaaaacgagaagacatactgaaggcatgcaagcagatgcagatgataat
attcttgattactcggatggaatggaagaaatatttggttccctcaattccctgaaacaa
gacatcgagcatatgaaatttccaatgggtactcagaccaatccagcccgaacttgtaaa
gacctgcaactcagccatcctgacttcccagatggtgaatattggattgatcctaaccaa
ggttgctcaggagattccttcaaagtttactgtaatttcacatctggtggtgagacttgc
atttatccagacaaaaaatctgagggagtaagaatttcatcatggccaaaggagaaacca
ggaagttggtttagtgaatttaaaaggggaaaactgctttcatacttagatgttgaagga
aattccatcaatatggtgcaaatgacattcctgaaacttctgactgcctctgctcggcaa
aatttcacctaccactgtcatcagtcagcagcctggtatgatgtgtcatcaggaagttat
gacaaagcacttcggttcctgggatcaaatgatgaggagatgtcctatgacaataaccct
ttcatcaaagcactgtatgatggctgtgcgtccagaaaaggctatgaaaagactgtcatt
gaaatcaatacaccaaaaattgaccaagtacctattgttgatgtcatgatcaatgacttt
ggtgatcagaatcagaagtttggatttgaagttggtcctgtttgttttcttggctaa
DBGET
integrated database retrieval system
