Pan troglodytes (chimpanzee): 457530
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Entry
457530 CDS
T01005
Symbol
RC3H1
Name
(RefSeq) roquin-1 isoform X3
KO
K15690
RING finger and CCCH-type zinc finger domain-containing protein
Organism
ptr
Pan troglodytes (chimpanzee)
Brite
KEGG Orthology (KO) [BR:
ptr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ptr03000
]
457530 (RC3H1)
04121 Ubiquitin system [BR:
ptr04121
]
457530 (RC3H1)
Transcription factors [BR:
ptr03000
]
Eukaryotic type
Zinc finger
Cys3His zinc factors
457530 (RC3H1)
Ubiquitin system [BR:
ptr04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
457530 (RC3H1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Roquin_1_2-like_ROQ
ROQ_II
zf-RING_5
zf-RING_UBOX
zf-RING_2
zf-C3HC4_4
Prok-RING_4
zf-CCCH
zf-C3HC4_3
zf-C3HC4
zf-CCCH_UNK
zf-C3HC4_2
FYVE
zf_CCCH_4
zf-CCCH_4
Vesi_VP2
Baculo_IE-1
zf-RING_4
zf-RING_6
zf-RING_10
Motif
Other DBs
NCBI-GeneID:
457530
NCBI-ProteinID:
XP_009436847
Ensembl:
ENSPTRG00000001702
VGNC:
6975
LinkDB
All DBs
Position
1:75064430..75156285
Genome browser
AA seq
1132 aa
AA seq
DB search
MPVQAPQWTDFLSCPICTQTFDETIRKPISLGCGHTVCKMCLNKLHRKACPFDQTTINTD
IELLPVNSALLQLVGAQVPEQQPITLCSGVEDTKHYEEAKKCVEELALYLKPLSSARGVG
LNSTTQSVLSRPMQRKLVTLVHCQLVEEEGRIRAMRAARSLGERTVTELILQHQNPQQLS
SNLWAAVRARGCQFLGPAMQEEALKLVLLALEDGSALSRKVLVLFVVQRLEPRFPQASKT
SIGHVVQLLYRASCFKVTKRDEDSSLMQLKEEFRTYEALRREHDSQIVQIAMEAGLRIAP
DQWSSLLYGDQSHKSHMQSIIDKTPASFAQSVQELTIALQRTGDPANLNRLRPHLELLAN
IDPSPDAPPPTWEQLENGLVAVRTVVHGLVDYIQNHSKKGADQQQPPQHSKYKTYMCRDM
KQRGGCPRGASCTFAHSQEELEKFRKMNKRLVPRRPLSASLGQLNEVGLPSAAILPDEGA
VDLPSRKPPALPNGIVSTGNTVTQLIPRGTDPSYDSSLKPGKIDHLSSSAPGSPPDLLES
VPKSISALPVNPHPIPPRGPADLPPMPVTKPLQMVPRGSQLYPAQQTDVYYQDPRGAAPP
FEPAPYQQGMYYTPPPQCVSRFVRPPPSAPEPAPPYLDHYPPYLQERVVNSQYGTQPQQY
PPIYPSHYDGRRVYPAPSYTREEIFRESPIPIEIPPAAVPSYVPESRERYQQIESYYPVA
PHPTQIRPSYLREPPYSRLPPPPQPHPSLDELHRRRKEIMAQLEERKVISPPPFAPSPTL
PPTFHPEEFLDEDLKVAGKYKGNDYSQYSPWSCDTIGSYIGTKDAKPKDVVAAGSVEMMN
VESKGMRDQRLDLQRRAAETSDDDLIPFGDRPTVSRFGAISRTSKTIYQGAGPMQAMAPQ
GAPTKSINISDYSPYGTHGGWGASPYSPHQNIPSQGHFSERERISMSEVASHGKPLPSAE
REQLRLELQQLNHQISQQTQLRGLEAVSNRLVLQREANTLAGQSQPPPPPPPKWPGMISS
EQLSLELHQVEREIGKRTRELSMENQCSLDMKSKLNTSKQAENGQPEPQNKVPAEDLTLT
FSSDVPNGSALTQENISLLSNKTSSLNLSEDPEGGGDNNDSQRSGVTPSSAP
NT seq
3399 nt
NT seq
+upstream
nt +downstream
nt
atgcctgtacaagctccacaatggacggatttcctctcctgcccaatttgcactcagact
ttcgacgaaacaattcgaaagcccatcagtttgggttgtggccatactgtctgcaagatg
tgcctgaataaactccaccgcaaggcttgcccatttgaccagaccactatcaatacagac
attgagctcctccctgtgaactcagcattgctgcagctcgtgggtgctcaggtccctgag
cagcagcctattactttgtgtagtggggttgaagacacaaagcattatgaggaagccaag
aaatgtgtagaagaattagcattgtacttaaaaccgctcagcagtgctagaggagtgggt
ctgaacagcactactcagagtgttctgagtcgcccaatgcagaggaagcttgtgactcta
gtccactgtcaactcgtggaagaagaaggcaggattcgtgccatgagggcagctcgatct
ttaggtgaacgaacagttacagagctcattctccagcaccagaatcctcagcaactctct
tccaatctttgggcagcagtaagggctaggggatgccagttccttggaccagcaatgcag
gaggaagctttaaagttggttctgctggccttagaagatggttctgctttgtcaagaaaa
gtattggttctctttgtggtgcaaagattggagccacggtttcctcaagcctctaaaact
agcattgggcatgttgttcagctcctttatagagcctcctgtttcaaggtcaccaaacgt
gatgaagactcttctttgatgcagctgaaagaagaatttagaacctatgaagctctgcgg
cgagaacacgactcccagatagtgcagattgctatggaagcaggcttacgaattgcaccg
gaccagtggtcctctttgctttatggagaccagtctcacaaatctcatatgcagtccatt
attgacaagactccagcctcttttgcacagagtgttcaggaactaacaattgctctccag
cggactggagacccagcaaacttgaaccgactaagaccccatttggagctgttagcaaac
attgaccctagtccagatgctcctcctcctacttgggaacagctggaaaatgggctggtt
gctgtgcgtacagtggtacatgggctggttgattatatccagaaccacagcaaaaaagga
gcagatcagcagcagcctccacagcatagcaaatacaaaacatacatgtgtcgagatatg
aagcagagaggaggatgccctcgtggggccagctgtacatttgcacactcacaggaggaa
ctggaaaaatttcgtaaaatgaataagcgcctggttccgagaagacccttgagtgcctct
ttgggtcaacttaatgaggtgggcctgccttcagcagctatccttccagatgaaggtgca
gtggatctccctagcagaaaacctcctgctctgccaaatggaattgtatcaacagggaat
acagtaacacagcttattccgcgagggacagaccccagctatgattctagtctgaaacca
ggaaaaatagatcatctgagcagtagtgctcctggatcccctcctgacctgctagaatct
gttcctaagagtatttctgccttacctgtgaatccacatcctatacctccaagggggcca
gcagatctgcctccaatgcctgttaccaaaccacttcagatggtacctcgaggttctcag
ttatatccagcacaacagacggatgtttattatcaggatcctcgaggagcggctccgcca
tttgaaccagcaccttatcagcagggtatgtattatactccaccaccacaatgtgtgtcc
cgctttgtccgacctccaccatctgctcctgaacctgctcctccctacttggatcattat
ccaccctacctccaagaacgtgttgtaaactctcagtatggcacacagccacagcagtac
ccacctatatacccatctcactatgatggccgtcgagtgtaccctgctccgtcttacaca
agagaagagatattccgagaaagccctatacccattgagattccacctgcagcagtacca
tcgtatgtaccagaatccagagaaagataccaacagatcgagagttactatccagtggct
cctcatccaactcagatcagaccttcgtacctcagagaacctccttatagccggcttcct
cctcctccccagcctcatcctagtctagatgaactacatcgccgacgaaaggaaataatg
gcccagctagaggaaagaaaggttatctctccacctccttttgcaccttcaccaaccttg
cctcctacctttcatccggaagaatttttggatgaagacttgaaggtagctgggaaatac
aaaggaaatgattatagccaatactctccctggtcatgtgacaccatcggctcctacatt
ggaaccaaagatgcaaaacccaaagatgttgtggcagcagggagtgtggaaatgatgaat
gtggagagtaaaggaatgagggaccagcgattagatcttcagagaagagcagcagaaacc
agtgatgatgacctcatcccatttggagaccgaccaacagtgtctcggtttggtgccatc
tcacgaacttccaaaactatatatcagggtgctggtccaatgcaggctatggcacctcag
ggagctcctacaaaatctattaacatttcagattatagtccatatggaacccacggtggc
tggggagcttctccatattcacctcatcaaaacataccttctcagggacacttcagtgag
agggagagaatatctatgtcagaagtggccagtcatggaaaaccccttccatctgctgag
agagaacagctacgactagaattgcagcaattgaaccatcagattagccagcagacccag
ctacgtggactagaggctgttagtaacaggctggtgttgcagagggaggcaaacaccctg
gcaggccagtcacagcccccaccaccgccacctccaaaatggcctgggatgatctcaagt
gagcagttgagcttggaactgcaccaggtggaaagggaaatcgggaagagaacacgggaa
ctgagtatggaaaaccagtgttctctggacatgaaaagcaaactgaatacaagtaaacaa
gcagaaaatggacaaccagaaccacaaaacaaggttccggctgaggaccttacattgaca
ttcagcagtgatgtaccaaatggatcagccttgacacaagagaatatcagcctcctatca
aacaagaccagctctctgaacctgtcagaggaccctgagggaggaggggataataatgac
tcccagagatcaggagttactcccagttctgctccttaa
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integrated database retrieval system
