KEGG   Pan troglodytes (chimpanzee): 457630
Entry
457630            CDS       T01005                                 
Symbol
KDM5B
Name
(RefSeq) lysine-specific demethylase 5B isoform X3
  KO
K11446  [histone H3]-trimethyl-L-lysine4 demethylase [EC:1.14.11.67]
Organism
ptr  Pan troglodytes (chimpanzee)
Brite
KEGG Orthology (KO) [BR:ptr00001]
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01009 Protein phosphatases and associated proteins [BR:ptr01009]
    457630 (KDM5B)
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:ptr03036]
    457630 (KDM5B)
Enzymes [BR:ptr01000]
 1. Oxidoreductases
  1.14  Acting on paired donors, with incorporation or reduction of molecular oxygen
   1.14.11  With 2-oxoglutarate as one donor, and incorporation of one atom of oxygen into each donor
    1.14.11.67  [histone H3]-trimethyl-L-lysine4 demethylase
     457630 (KDM5B)
Protein phosphatases and associated proteins [BR:ptr01009]
 Protein serine/threonine phosphatases
  Phosphoprotein phosphatases (PPPs)
   Protein phosphatase-1
    PP1-interacting proteins (PIPs)
     457630 (KDM5B)
Chromosome and associated proteins [BR:ptr03036]
 Eukaryotic type
  Histone modification proteins
   Histone demethylases
    457630 (KDM5B)
SSDB
Motif
Pfam: PLU-1 JmjC KDM5_C-hel PHD ARID zf-C5HC2 JmjN zf-PHD-like PHD_2 PHD-1st_NSD Lipoprotein_20
Other DBs
NCBI-GeneID: 457630
NCBI-ProteinID: XP_016791496
Ensembl: ENSPTRG00000001856
VGNC: 8062
LinkDB
Position
1:46289291..46369775
AA seq 1499 aa
MEAATALHPGPRPALPLGGPGPLGEFLPPPECPVFEPSWEEFADPFAFIHKIRPIAEQTG
ICKVRPPPDWQPPFACDVDKLHFTPRIQRLNELEAQTRVKLNFLDQIAKYWELQGSTLKI
PHVERKILDLFQLNKLVAEEGGFAVVCKDRKWTKIATKMGFAPGKAVGSHIRGHYERILN
PYNLFLSGDSLRAMNIKIEPEETTEARTHNLRRRMGCPTPKCENEKEMKSSIKQEPIERK
DYIVENEKEKPKSRSKKATNAVDLYVCLLCGSGNDEDRLLLCDGCDDSYHTFCLIPPLHD
VPKGDWRCPKCLAQECSKPQEAFGFEQAARDYTLRTFGEMADAFKSDYFNMPVHMVPTEL
VEKEFWRLVSTIEEDVTVEYGADIASKEFGSGFPVRDGKIKLSPEEEEYLDSGWNLNNMP
VMEQSVLAHITADICGMKLPWLYVGMCFSSFCWHIEDHWSYSINYLHWGEPKTWYGVPGY
AAEQLENVMKKLAPELFVSQPDLLHQLVTIMNPNTLMTHEVPVYRTNQCAGEFVITFPRA
YHSGFNQGFNFAEAVNFCTVDWLPLGRQCVEHYRLLHRYCVFSHDEMICKMASKADVLDV
VVASTVQKDMAIMIEDEKALRETVRKLGVIDSERMDFELLPDDERQCVKCKTTCFMSAIS
CSCKPGLLVCLHHVKELCSCPPYKYKLRYRYTLDDLYPMMNALKLRAESYNEWALNVNEA
LEAKINKKKSLVSFKALIEESEMKKFPDNDLLRHLRLVTQDAEKCASVAQQLLNGKRQTR
YRSGGGKSQNQLTVNELRQFVTQLYALPCVLSQTPLLKDLLNRVEDFQQHSQKLLSEEMP
SAAELQDLLDVSFEFDVELPQLAEMRIRLEQARWLEEVQQACLDPSSLTLDDMRRLIDLG
VGLAPYSAVEKAMARLQELLTVSEHWDDKAKSLLKARPRHSLNSLATAVKEIEEIPAYLP
NGAALKDSVQRARDWLQDVEALQAGGRVPVLDTLIELVTRGRSIPVHLNSLPRLETLVAE
VQAWKECAVNTFLTENSPYSLLEVLCPRCDIGLLGLKRKQRKLKEPLPNGKKKSTKLESL
SDLERALTESKETASAMATLGEARLREMEALQSLRLANEGKLLTPVQDVDIKICLCQKAP
AAPMIQCELCRDAFHTSCVAVPSISQGPRIWLCPHCRRSEKPPLEKILPLLASLQRIRVR
LPEGDALRYMIERTVNWQHRAQQLLSSGNLKFVQDRVGSGLLYSRWQASAGQVSDTNKVS
QPPGTTSFSLPDDWDNRTSYLHSPFSTGRSCIPLHGVSPEVNELLMEAQLLQVSLPEIQE
LYQTLLAKPSPAQQTDRSSPVRPSSEKNDCCRGKRDGINSLERKLKRRLEREGLSSERWE
RVKKMRTPKKKKIKLSHPKDMNNFKLERERSYELVRSAETHSLPSDTSYSEQEDSEDEDA
ICPAVSCLQPEGDEVDWVQCDGSCNQWFHQVCVGVSPEMAEKEDYICVRCTVKDAPSRK
NT seq 4500 nt   +upstreamnt  +downstreamnt
atggaggcggccaccgcgctgcacccaggcccgcgcccggcgctgcccctcgggggcccg
ggcccgctgggcgagttcctgcctccacccgagtgcccggtcttcgaacccagctgggaa
gagttcgctgaccccttcgctttcatccacaagatccggcccatagccgagcagactggg
atctgtaaggtgcggccgccgccggattggcagccaccatttgcatgtgatgttgataaa
cttcattttacgccacgtatccagagactgaatgaattggaggcccaaactcgtgtaaaa
ttgaatttcttggaccagattgcaaagtactgggagttacagggaagtactctgaaaatt
ccacatgtggagaggaagatcttggacttatttcagcttaataagttagttgcagaggaa
ggtggatttgcagttgtttgcaaggacagaaaatggaccaaaattgctaccaagatgggg
tttgctcctggcaaagcagtgggctcacatatcagagggcattatgaacgaattctcaac
ccctacaacttattcctgtccggagacagcctaagggccatgaatattaaaatagaaccc
gaggagacaacagaagccagaactcataatctgagacgtcgaatgggttgtccaactcca
aaatgtgaaaatgagaaagaaatgaagagtagcatcaaacaagaacctattgagaggaaa
gattatattgtagaaaatgagaaggaaaagcccaagagtcgatctaaaaaagccaccaat
gctgtggacctgtatgtctgtcttttatgtggcagtggcaatgatgaagaccggctactg
ttgtgtgatggctgtgatgacagttaccataccttttgcttgatcccacctctccatgat
gttcccaagggagactggaggtgtcctaagtgtttggctcaggaatgtagtaagccacaa
gaagcatttggctttgaacaagcagccagggactataccctccgtacttttggggaaatg
gcagatgcgttcaaatctgattacttcaacatgccagtccatatggtccccacagagctt
gttgagaaagaattttggagactagtaagcactattgaggaggatgtcacagtggaatat
ggagctgacattgcctcaaaggaatttggcagtggctttcctgtccgagatgggaaaatc
aaactctcacctgaggaagaggagtatcttgatagtggctggaatttgaacaacatgcca
gtgatggagcagtctgtccttgcacatattactgctgatatatgtggcatgaaacttcct
tggttgtatgtgggaatgtgcttttcttcattctgttggcatattgaagaccactggagc
tattcaattaactacttgcactggggtgagccaaaaacctggtatggagtcccagggtat
gctgctgagcagctagaaaatgtaatgaagaaactagctccagaactctttgtgtcccag
ccggatctcctccatcagcttgtgaccatcatgaaccccaataccctgatgactcatgaa
gtgcctgtttaccgaactaatcagtgtgctggggagtttgtgattacatttccaagagcc
taccacagtggttttaaccagggttttaattttgctgaggctgttaacttctgcactgtt
gattggctgccattaggccgacagtgtgtggagcattatcgcttgcttcatcgatattgt
gtattttcccacgatgagatgatctgcaagatggcttccaaggctgatgtactagatgtt
gtagtggcttcaactgttcagaaagacatggccattatgattgaggatgagaaagcttta
agagaaactgtccgtaaattgggagtgattgattcggaaagaatggattttgagctgttg
ccagatgatgaacgtcagtgtgtaaaatgcaaaactacatgcttcatgtctgccatctcc
tgttcttgtaaacctggccttcttgtttgcctgcatcatgtaaaagaattgtgttcctgt
cctccttataaatataaattgcggtatagatacacgctggatgatctctaccctatgatg
aatgcattgaagcttcgagcagaatcttacaacgaatgggccttgaatgtgaatgaagct
ttggaggcaaagatcaacaagaagaaaagccttgtcagcttcaaggctttaattgaagaa
tctgaaatgaagaaattcccagacaatgatcttttgcgacaccttcgcctagtcacacag
gatgcagagaagtgtgcctctgttgcgcagcaattgcttaatggcaaaaggcaaactaga
tatcgatctggtggagggaaatcccaaaatcagttgacagtgaatgagctccggcagttt
gtaacacagctgtatgctcttccatgtgtcctcagtcagacaccattactaaaggatctc
ttgaatcgtgtagaagattttcaacagcatagtcagaaactactctctgaggaaatgcct
agtgctgcggagctgcaagacttgctagatgtcagctttgaatttgatgttgaacttcca
cagcttgctgagatgcgtatccgtttggaacaagcccgttggctagaagaggtgcagcaa
gcttgcctagaccccagctcccttactttagatgatatgagacgtctcatagacctaggg
gtagggctggccccgtattcagcagtggagaaagctatggcccggctgcaggaactgctc
acagtgtcagagcactgggacgacaaagccaagagtctcctcaaggccaggccacgacat
tcattgaatagccttgctacggcagtaaaggaaatcgaagagatccctgcatatctgccc
aatggtgcggctctgaaagactcagtgcagagagccagagactggcttcaggatgtagag
gccctgcaggctggaggacgtgtgccagtgttagacacactcatagaacttgttacacga
ggccgatctatcccggtacatctgaattctttgccaagactggaaaccctagtagctgag
gttcaggcttggaaagaatgtgctgttaatacattcttgaccgagaattctccatattct
ctcttagaggtgctgtgtcctcgatgtgatattggccttttgggattgaaaaggaagcag
agaaagttaaaggagcccttgccaaatggaaagaaaaaaagcaccaaattagagagtctg
agtgacctggagagagctttaactgaaagcaaggagactgcttcagctatggcaactctc
ggggaagctcgcctaagggaaatggaagccttgcagtctctcagactcgccaatgaaggg
aaattgctgacgcctgtccaagatgtggatataaaaatctgcctgtgtcagaaggcccca
gctgcccctatgattcagtgtgaactctgcagggatgctttccacaccagttgtgtggcg
gtacccagtatttcacagggcccccgaatctggctttgtccccattgtcggaggtcagag
aaacctccattagagaaaattctgcccctgctcgcctcccttcagcgtatccgagttcgc
cttcctgagggagatgcacttcgatatatgattgaaagaaccgtgaactggcagcacaga
gcccagcaactgctttcgtcagggaatcttaaatttgtgcaagatcgagtgggctcagga
ctgttatatagcagatggcaagcctcagcaggacaggtgtcagacacaaacaaggtatct
caacctcctggcacaacatcattttctttgcctgatgactgggacaacagaacctcatat
ttgcactctcccttctcaactggacgaagttgtatccccctccatggcgttagtccagaa
gtgaatgaactattgatggaagcccagctgctccaggtatcccttcctgaaattcaggaa
ctttaccagactttacttgcaaagccaagccctgctcagcagactgaccgaagctcacca
gtgagacccagcagtgagaagaatgactgttgccgagggaagcgagatggaattaacagt
cttgagagaaaactgaagagacgcctggaaagagagggcctctccagtgagcggtgggaa
cgagttaagaaaatgcggacccccaaaaagaagaaaatcaaactgagccaccccaaggac
atgaacaatttcaagttagagagagagcgtagctatgaattagttcgttctgctgaaact
cattccctgccctcagacacatcctattccgaacaggaagactctgaggatgaagatgcc
atctgcccagctgtgagctgcctgcagccagaaggagatgaggtggactgggtccagtgt
gatggcagctgcaatcagtggtttcatcaggtctgtgttggtgtctccccagagatggca
gagaaagaagactacatctgtgtgcgctgtactgtgaaggacgcaccaagccgaaagtaa

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