KEGG T01005: 457983

Pan troglodytes (chimpanzee): 457983

Entry

457983            CDS       T01005

Symbol

RBM8A

Name

(RefSeq) RNA-binding protein 8A isoform X1

K12876

RNA-binding protein 8A

Organism

ptr Pan troglodytes (chimpanzee)

Pathway

ptr03013

Nucleocytoplasmic transport

ptr03015

mRNA surveillance pathway

ptr03040

Spliceosome

Brite

KEGG Orthology (KO) [BR:ptr00001]
09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    457983 (RBM8A)
  09122 Translation
   03013 Nucleocytoplasmic transport
    457983 (RBM8A)
   03015 mRNA surveillance pathway
    457983 (RBM8A)
09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:ptr03019]
    457983 (RBM8A)
   03041 Spliceosome [BR:ptr03041]
    457983 (RBM8A)
Messenger RNA biogenesis [BR:ptr03019]
Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    EJC complex
     457983 (RBM8A)
Spliceosome [BR:ptr03041]
Complex C
  Other components
   EJC/TREX
    457983 (RBM8A)

SSDB

Motif

Pfam:

RRM_1 RRM_3 RRM_5

Other DBs

NCBI-GeneID:

NCBI-ProteinID:

Ensembl:

VGNC:

UniProt:

LinkDB

Position

1:106682139..106685974

AA seq 174 aa
MADVLDLHEAGGEDFAMDEDGDESIHKLKEKAKKRKGRGFGSEEGSRARMREDYDSVEQD
GDEPGPQRSVEGWILFVTGVHEEATEEDIHDKFAEYGEIKNIHLNLDRRTGYLKGYTLVE
YETYKEAQAAMEGLNGQDLMGQPISVDWCFVRGPPKGKRRGGRRRSRSPDRRRR

NT seq 525 nt +upstreamnt +downstreamnt
atggcggacgtgctagatcttcacgaggctgggggcgaagatttcgccatggatgaggat
ggggacgagagcattcacaaactgaaagaaaaagcgaagaaacggaagggtcgcggcttt
ggctccgaagaggggtcccgagcgcggatgcgtgaggattatgacagcgtggagcaggat
ggcgatgaacccggaccacaacgctctgttgaaggctggattctctttgtaactggagtc
catgaggaagccaccgaagaagacatacacgacaaattcgcagaatatggggaaattaaa
aacattcacctcaacctcgacaggcgaacaggatatctgaaggggtatactctagttgaa
tatgaaacatacaaggaagcccaggctgctatggagggactcaatggccaggatttgatg
ggacagcccatcagcgttgactggtgttttgttcggggtccaccaaaaggcaagaggaga
ggtggccgaagacgcagcagaagtccagaccggagacgtcgctga

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